Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 RPS15AP38-201ENST00000413110 372 ntBASIC6.62□□□□□ -1.35
SSU72Q9NP77 RPS17P17-201ENST00000419392 409 ntBASIC6.62□□□□□ -1.35
SSU72Q9NP77 Z97055.1-201ENST00000419730 712 ntBASIC6.62□□□□□ -1.35
SSU72Q9NP77 GAPDHP57-201ENST00000424400 585 ntBASIC6.62□□□□□ -1.35
SSU72Q9NP77 CYP4F34P-201ENST00000425951 481 ntBASIC6.62□□□□□ -1.35
SSU72Q9NP77 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC6.62□□□□□ -1.35
SSU72Q9NP77 AF274573.1-201ENST00000430535 494 ntBASIC6.62□□□□□ -1.35
SSU72Q9NP77 AC105052.2-201ENST00000434317 794 ntBASIC6.62□□□□□ -1.35
SSU72Q9NP77 HMGB1P45-201ENST00000435986 653 ntBASIC6.62□□□□□ -1.35
SSU72Q9NP77 HMGB1P31-201ENST00000437242 427 ntBASIC6.62□□□□□ -1.35
SSU72Q9NP77 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
SSU72Q9NP77 AL662791.1-201ENST00000441992 928 ntBASIC6.62□□□□□ -1.35
SSU72Q9NP77 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC6.62□□□□□ -1.35
SSU72Q9NP77 ARL5AP2-201ENST00000444698 533 ntBASIC6.62□□□□□ -1.35
SSU72Q9NP77 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC6.62□□□□□ -1.35
SSU72Q9NP77 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC6.62□□□□□ -1.35
SSU72Q9NP77 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
SSU72Q9NP77 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC6.62□□□□□ -1.35
SSU72Q9NP77 TVP23CP1-201ENST00000450317 639 ntBASIC6.62□□□□□ -1.35
SSU72Q9NP77 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC6.62□□□□□ -1.35
SSU72Q9NP77 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC6.62□□□□□ -1.35
SSU72Q9NP77 RFC5P1-201ENST00000454419 874 ntBASIC6.62□□□□□ -1.35
SSU72Q9NP77 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC6.62□□□□□ -1.35
SSU72Q9NP77 ANK3-207ENST00000460468 677 ntTSL 3 BASIC6.62□□□□□ -1.35
SSU72Q9NP77 AC008620.1-201ENST00000468453 592 ntBASIC6.62□□□□□ -1.35
SSU72Q9NP77 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC6.62□□□□□ -1.35
SSU72Q9NP77 MARK2P8-201ENST00000476069 952 ntBASIC6.62□□□□□ -1.35
SSU72Q9NP77 AC010655.2-201ENST00000493710 662 ntTSL 3 BASIC6.62□□□□□ -1.35
SSU72Q9NP77 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
SSU72Q9NP77 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC6.62□□□□□ -1.35
SSU72Q9NP77 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC6.62□□□□□ -1.35
SSU72Q9NP77 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC6.62□□□□□ -1.35
SSU72Q9NP77 RNU6-1308P-201ENST00000516817 103 ntBASIC6.62□□□□□ -1.35
SSU72Q9NP77 Y_RNA.702-201ENST00000516843 96 ntBASIC6.62□□□□□ -1.35
SSU72Q9NP77 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC6.62□□□□□ -1.35
SSU72Q9NP77 LINC02055-203ENST00000520068 712 ntTSL 2 BASIC6.62□□□□□ -1.35
SSU72Q9NP77 AP000873.2-209ENST00000528083 547 ntTSL 4 BASIC6.62□□□□□ -1.35
SSU72Q9NP77 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC6.62□□□□□ -1.35
SSU72Q9NP77 AC022796.1-202ENST00000531882 477 ntTSL 5 BASIC6.62□□□□□ -1.35
SSU72Q9NP77 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC6.62□□□□□ -1.35
SSU72Q9NP77 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC6.62□□□□□ -1.35
SSU72Q9NP77 OR7E1P-201ENST00000533891 958 ntBASIC6.62□□□□□ -1.35
SSU72Q9NP77 AC078950.1-201ENST00000538349 550 ntTSL 4 BASIC6.62□□□□□ -1.35
SSU72Q9NP77 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC6.62□□□□□ -1.35
SSU72Q9NP77 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC6.62□□□□□ -1.35
SSU72Q9NP77 OVCH1-AS1-202ENST00000550906 654 ntTSL 3 BASIC6.62□□□□□ -1.35
SSU72Q9NP77 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC6.62□□□□□ -1.35
SSU72Q9NP77 MIR3159-201ENST00000584572 74 ntBASIC6.62□□□□□ -1.35
SSU72Q9NP77 AP001269.1-201ENST00000592820 528 ntTSL 4 BASIC6.62□□□□□ -1.35
SSU72Q9NP77 AC011447.2-201ENST00000592921 283 ntBASIC6.62□□□□□ -1.35
SSU72Q9NP77 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC6.62□□□□□ -1.35
SSU72Q9NP77 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.62□□□□□ -1.35
SSU72Q9NP77 C8orf59P2-201ENST00000603441 271 ntBASIC6.62□□□□□ -1.35
SSU72Q9NP77 AL390816.3-201ENST00000604527 1066 ntBASIC6.62□□□□□ -1.35
SSU72Q9NP77 NDUFB9P1-201ENST00000604683 510 ntBASIC6.62□□□□□ -1.35
SSU72Q9NP77 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.62□□□□□ -1.35
SSU72Q9NP77 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC6.62□□□□□ -1.35
SSU72Q9NP77 AP000547.3-204ENST00000588548 2523 ntBASIC6.62□□□□□ -1.35
SSU72Q9NP77 COX7B-203ENST00000481445 2471 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
SSU72Q9NP77 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
SSU72Q9NP77 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
SSU72Q9NP77 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
SSU72Q9NP77 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
SSU72Q9NP77 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
SSU72Q9NP77 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC6.62□□□□□ -1.35
SSU72Q9NP77 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
SSU72Q9NP77 LINC02275-201ENST00000508313 4365 ntTSL 2 BASIC6.62□□□□□ -1.35
SSU72Q9NP77 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6.61□□□□□ -1.35
SSU72Q9NP77 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
SSU72Q9NP77 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC6.61□□□□□ -1.35
SSU72Q9NP77 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SSU72Q9NP77 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC6.61□□□□□ -1.35
SSU72Q9NP77 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC6.61□□□□□ -1.35
SSU72Q9NP77 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
SSU72Q9NP77 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC6.61□□□□□ -1.35
SSU72Q9NP77 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC6.61□□□□□ -1.35
SSU72Q9NP77 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
SSU72Q9NP77 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
SSU72Q9NP77 DLEU2L-201ENST00000371086 3555 ntBASIC6.61□□□□□ -1.35
SSU72Q9NP77 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
SSU72Q9NP77 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SSU72Q9NP77 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC6.61□□□□□ -1.35
SSU72Q9NP77 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC6.61□□□□□ -1.35
SSU72Q9NP77 AC011455.2-201ENST00000599320 3336 ntBASIC6.61□□□□□ -1.35
SSU72Q9NP77 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SSU72Q9NP77 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
SSU72Q9NP77 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SSU72Q9NP77 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SSU72Q9NP77 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SSU72Q9NP77 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
SSU72Q9NP77 ARL4A-201ENST00000356797 1147 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
SSU72Q9NP77 U3.1-201ENST00000362500 215 ntBASIC6.61□□□□□ -1.35
SSU72Q9NP77 SNORA72.1-201ENST00000363485 129 ntBASIC6.61□□□□□ -1.35
SSU72Q9NP77 Y_RNA.256-201ENST00000364594 104 ntBASIC6.61□□□□□ -1.35
SSU72Q9NP77 RNU6-621P-201ENST00000364752 109 ntBASIC6.61□□□□□ -1.35
SSU72Q9NP77 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
SSU72Q9NP77 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC6.61□□□□□ -1.35
SSU72Q9NP77 RAN-201ENST00000392367 780 ntTSL 5 BASIC6.61□□□□□ -1.35
SSU72Q9NP77 A2ML1-AS2-201ENST00000394240 386 ntTSL 5 BASIC6.61□□□□□ -1.35
SSU72Q9NP77 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC6.61□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms