Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC5.75□□□□□ -1.49
VPS50Q96JG6 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.75□□□□□ -1.49
VPS50Q96JG6 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.75□□□□□ -1.49
VPS50Q96JG6 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.75□□□□□ -1.49
VPS50Q96JG6 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC5.75□□□□□ -1.49
VPS50Q96JG6 RPS7P14-201ENST00000426405 583 ntBASIC5.75□□□□□ -1.49
VPS50Q96JG6 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.75□□□□□ -1.49
VPS50Q96JG6 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.75□□□□□ -1.49
VPS50Q96JG6 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.75□□□□□ -1.49
VPS50Q96JG6 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.75□□□□□ -1.49
VPS50Q96JG6 ZNF736P8Y-201ENST00000451913 669 ntBASIC5.75□□□□□ -1.49
VPS50Q96JG6 AC098826.2-201ENST00000452011 651 ntBASIC5.75□□□□□ -1.49
VPS50Q96JG6 AL358876.1-201ENST00000453364 1075 ntBASIC5.75□□□□□ -1.49
VPS50Q96JG6 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC5.75□□□□□ -1.49
VPS50Q96JG6 AC084754.1-201ENST00000463466 464 ntBASIC5.75□□□□□ -1.49
VPS50Q96JG6 RN7SL352P-201ENST00000466002 277 ntBASIC5.75□□□□□ -1.49
VPS50Q96JG6 RPL21P18-201ENST00000469899 480 ntBASIC5.75□□□□□ -1.49
VPS50Q96JG6 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC5.75□□□□□ -1.49
VPS50Q96JG6 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.75□□□□□ -1.49
VPS50Q96JG6 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC5.75□□□□□ -1.49
VPS50Q96JG6 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
VPS50Q96JG6 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.75□□□□□ -1.49
VPS50Q96JG6 AC010476.1-201ENST00000519111 851 ntBASIC5.75□□□□□ -1.49
VPS50Q96JG6 AC034205.1-201ENST00000520621 638 ntBASIC5.75□□□□□ -1.49
VPS50Q96JG6 WBP1LP3-201ENST00000523033 208 ntBASIC5.75□□□□□ -1.49
VPS50Q96JG6 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.75□□□□□ -1.49
VPS50Q96JG6 TRIM51DP-201ENST00000529746 596 ntBASIC5.75□□□□□ -1.49
VPS50Q96JG6 OR6M2P-201ENST00000529831 871 ntBASIC5.75□□□□□ -1.49
VPS50Q96JG6 AC092865.1-201ENST00000544395 1023 ntBASIC5.75□□□□□ -1.49
VPS50Q96JG6 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.75□□□□□ -1.49
VPS50Q96JG6 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC5.75□□□□□ -1.49
VPS50Q96JG6 BICD1-206ENST00000551086 423 ntTSL 3 BASIC5.75□□□□□ -1.49
VPS50Q96JG6 AL359219.2-201ENST00000555184 348 ntBASIC5.75□□□□□ -1.49
VPS50Q96JG6 AL049779.3-201ENST00000557141 606 ntBASIC5.75□□□□□ -1.49
VPS50Q96JG6 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
VPS50Q96JG6 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.75□□□□□ -1.49
VPS50Q96JG6 STARD6-202ENST00000577499 696 ntTSL 2 BASIC5.75□□□□□ -1.49
VPS50Q96JG6 AL445435.1-201ENST00000604232 665 ntBASIC5.75□□□□□ -1.49
VPS50Q96JG6 AL645933.2-201ENST00000606743 1207 ntBASIC5.75□□□□□ -1.49
VPS50Q96JG6 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC5.75□□□□□ -1.49
VPS50Q96JG6 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC5.75□□□□□ -1.49
VPS50Q96JG6 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.75□□□□□ -1.49
VPS50Q96JG6 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
VPS50Q96JG6 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.75□□□□□ -1.49
VPS50Q96JG6 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.75□□□□□ -1.49
VPS50Q96JG6 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.75□□□□□ -1.49
VPS50Q96JG6 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
VPS50Q96JG6 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
VPS50Q96JG6 AC114774.1-201ENST00000507410 1770 ntBASIC5.75□□□□□ -1.49
VPS50Q96JG6 MAPK10-328ENST00000641553 4009 ntBASIC5.75□□□□□ -1.49
VPS50Q96JG6 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
VPS50Q96JG6 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
VPS50Q96JG6 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.74□□□□□ -1.49
VPS50Q96JG6 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.74□□□□□ -1.49
VPS50Q96JG6 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.74□□□□□ -1.49
VPS50Q96JG6 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
VPS50Q96JG6 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
VPS50Q96JG6 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
VPS50Q96JG6 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.74□□□□□ -1.49
VPS50Q96JG6 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
VPS50Q96JG6 RAD1P1-201ENST00000231383 813 ntBASIC5.74□□□□□ -1.49
VPS50Q96JG6 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.74□□□□□ -1.49
VPS50Q96JG6 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
VPS50Q96JG6 TPT1-204ENST00000379060 764 ntTSL 5 BASIC5.74□□□□□ -1.49
VPS50Q96JG6 RNU6-1005P-201ENST00000384519 107 ntBASIC5.74□□□□□ -1.49
VPS50Q96JG6 VN1R51P-201ENST00000411675 945 ntBASIC5.74□□□□□ -1.49
VPS50Q96JG6 AL158825.1-201ENST00000414735 521 ntBASIC5.74□□□□□ -1.49
VPS50Q96JG6 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC5.74□□□□□ -1.49
VPS50Q96JG6 HMGB3P5-201ENST00000428894 612 ntBASIC5.74□□□□□ -1.49
VPS50Q96JG6 AL136231.1-201ENST00000429407 730 ntBASIC5.74□□□□□ -1.49
VPS50Q96JG6 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.74□□□□□ -1.49
VPS50Q96JG6 AC099670.2-201ENST00000435130 321 ntBASIC5.74□□□□□ -1.49
VPS50Q96JG6 GAPDHP23-201ENST00000444823 993 ntBASIC5.74□□□□□ -1.49
VPS50Q96JG6 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC5.74□□□□□ -1.49
VPS50Q96JG6 AL162739.1-201ENST00000450606 307 ntBASIC5.74□□□□□ -1.49
VPS50Q96JG6 AL139824.2-201ENST00000458731 1095 ntBASIC5.74□□□□□ -1.49
VPS50Q96JG6 AC008379.1-201ENST00000463655 464 ntBASIC5.74□□□□□ -1.49
VPS50Q96JG6 RPSAP39-201ENST00000467439 883 ntBASIC5.74□□□□□ -1.49
VPS50Q96JG6 AC068587.2-201ENST00000478386 781 ntBASIC5.74□□□□□ -1.49
VPS50Q96JG6 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.74□□□□□ -1.49
VPS50Q96JG6 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.74□□□□□ -1.49
VPS50Q96JG6 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC5.74□□□□□ -1.49
VPS50Q96JG6 AC021146.7-201ENST00000509604 775 ntBASIC5.74□□□□□ -1.49
VPS50Q96JG6 RN7SKP238-201ENST00000516483 249 ntBASIC5.74□□□□□ -1.49
VPS50Q96JG6 IGKV3D-25-201ENST00000519599 235 ntBASIC5.74□□□□□ -1.49
VPS50Q96JG6 TPM3P3-201ENST00000521343 354 ntBASIC5.74□□□□□ -1.49
VPS50Q96JG6 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC5.74□□□□□ -1.49
VPS50Q96JG6 AP000859.1-201ENST00000525536 307 ntBASIC5.74□□□□□ -1.49
VPS50Q96JG6 AC118942.1-201ENST00000529674 1035 ntBASIC5.74□□□□□ -1.49
VPS50Q96JG6 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.74□□□□□ -1.49
VPS50Q96JG6 AC079600.1-201ENST00000550326 297 ntBASIC5.74□□□□□ -1.49
VPS50Q96JG6 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.74□□□□□ -1.49
VPS50Q96JG6 AC091078.2-201ENST00000557145 559 ntBASIC5.74□□□□□ -1.49
VPS50Q96JG6 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC5.74□□□□□ -1.49
VPS50Q96JG6 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.74□□□□□ -1.49
VPS50Q96JG6 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.74□□□□□ -1.49
VPS50Q96JG6 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.74□□□□□ -1.49
VPS50Q96JG6 MIR4660-201ENST00000583549 74 ntBASIC5.74□□□□□ -1.49
VPS50Q96JG6 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC5.74□□□□□ -1.49
VPS50Q96JG6 MTCO2P2-201ENST00000591258 225 ntBASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 130.3 ms