Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
ZNF439Q8NDP4 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
ZNF439Q8NDP4 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC4.37□□□□□ -1.71
ZNF439Q8NDP4 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
ZNF439Q8NDP4 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
ZNF439Q8NDP4 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
ZNF439Q8NDP4 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
ZNF439Q8NDP4 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC4.37□□□□□ -1.71
ZNF439Q8NDP4 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
ZNF439Q8NDP4 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
ZNF439Q8NDP4 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
ZNF439Q8NDP4 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
ZNF439Q8NDP4 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.36□□□□□ -1.71
ZNF439Q8NDP4 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
ZNF439Q8NDP4 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
ZNF439Q8NDP4 AL034549.2-201ENST00000618285 3373 ntBASIC4.36□□□□□ -1.71
ZNF439Q8NDP4 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
ZNF439Q8NDP4 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
ZNF439Q8NDP4 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.36□□□□□ -1.71
ZNF439Q8NDP4 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
ZNF439Q8NDP4 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.36□□□□□ -1.71
ZNF439Q8NDP4 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC4.36□□□□□ -1.71
ZNF439Q8NDP4 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
ZNF439Q8NDP4 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.36□□□□□ -1.71
ZNF439Q8NDP4 THAP12P5-201ENST00000405864 2275 ntBASIC4.36□□□□□ -1.71
ZNF439Q8NDP4 BMS1P3-201ENST00000372011 932 ntBASIC4.36□□□□□ -1.71
ZNF439Q8NDP4 SSX3-202ENST00000376893 800 ntTSL 2 BASIC4.36□□□□□ -1.71
ZNF439Q8NDP4 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
ZNF439Q8NDP4 BPHL-201ENST00000380368 797 ntTSL 5 BASIC4.36□□□□□ -1.71
ZNF439Q8NDP4 CTSL3P-202ENST00000412179 788 ntBASIC4.36□□□□□ -1.71
ZNF439Q8NDP4 NAP1L4P2-201ENST00000425958 899 ntBASIC4.36□□□□□ -1.71
ZNF439Q8NDP4 AC104843.2-201ENST00000427666 297 ntBASIC4.36□□□□□ -1.71
ZNF439Q8NDP4 DSTNP5-201ENST00000427921 523 ntBASIC4.36□□□□□ -1.71
ZNF439Q8NDP4 AC090018.1-201ENST00000434369 367 ntBASIC4.36□□□□□ -1.71
ZNF439Q8NDP4 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC4.36□□□□□ -1.71
ZNF439Q8NDP4 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC4.36□□□□□ -1.71
ZNF439Q8NDP4 NOP56P2-201ENST00000447491 769 ntBASIC4.36□□□□□ -1.71
ZNF439Q8NDP4 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.36□□□□□ -1.71
ZNF439Q8NDP4 OR52E3P-201ENST00000452083 936 ntBASIC4.36□□□□□ -1.71
ZNF439Q8NDP4 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC4.36□□□□□ -1.71
ZNF439Q8NDP4 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC4.36□□□□□ -1.71
ZNF439Q8NDP4 AC100832.1-201ENST00000471945 383 ntBASIC4.36□□□□□ -1.71
ZNF439Q8NDP4 RN7SL423P-201ENST00000486202 304 ntBASIC4.36□□□□□ -1.71
ZNF439Q8NDP4 RN7SL814P-201ENST00000487715 300 ntBASIC4.36□□□□□ -1.71
ZNF439Q8NDP4 RN7SL466P-201ENST00000497546 295 ntBASIC4.36□□□□□ -1.71
ZNF439Q8NDP4 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC4.36□□□□□ -1.71
ZNF439Q8NDP4 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC4.36□□□□□ -1.71
ZNF439Q8NDP4 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC4.36□□□□□ -1.71
ZNF439Q8NDP4 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC4.36□□□□□ -1.71
ZNF439Q8NDP4 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC4.36□□□□□ -1.71
ZNF439Q8NDP4 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC4.36□□□□□ -1.71
ZNF439Q8NDP4 EIF3KP3-201ENST00000514461 639 ntBASIC4.36□□□□□ -1.71
ZNF439Q8NDP4 YWHABP2-201ENST00000540201 713 ntBASIC4.36□□□□□ -1.71
ZNF439Q8NDP4 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.36□□□□□ -1.71
ZNF439Q8NDP4 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.36□□□□□ -1.71
ZNF439Q8NDP4 NMNAT1P5-201ENST00000559657 841 ntBASIC4.36□□□□□ -1.71
ZNF439Q8NDP4 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC4.36□□□□□ -1.71
ZNF439Q8NDP4 RBM22P1-201ENST00000578589 1214 ntBASIC4.36□□□□□ -1.71
ZNF439Q8NDP4 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC4.36□□□□□ -1.71
ZNF439Q8NDP4 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC4.36□□□□□ -1.71
ZNF439Q8NDP4 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC4.36□□□□□ -1.71
ZNF439Q8NDP4 AL121890.2-201ENST00000617644 465 ntBASIC4.36□□□□□ -1.71
ZNF439Q8NDP4 AP001962.1-201ENST00000624114 559 ntBASIC4.36□□□□□ -1.71
ZNF439Q8NDP4 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC4.36□□□□□ -1.71
ZNF439Q8NDP4 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
ZNF439Q8NDP4 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
ZNF439Q8NDP4 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.36□□□□□ -1.71
ZNF439Q8NDP4 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
ZNF439Q8NDP4 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
ZNF439Q8NDP4 AC021242.1-201ENST00000507315 2035 ntBASIC4.36□□□□□ -1.71
ZNF439Q8NDP4 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
ZNF439Q8NDP4 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
ZNF439Q8NDP4 AC104260.2-201ENST00000623551 3497 ntBASIC4.36□□□□□ -1.71
ZNF439Q8NDP4 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
ZNF439Q8NDP4 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.35□□□□□ -1.71
ZNF439Q8NDP4 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
ZNF439Q8NDP4 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
ZNF439Q8NDP4 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
ZNF439Q8NDP4 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
ZNF439Q8NDP4 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.35□□□□□ -1.71
ZNF439Q8NDP4 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
ZNF439Q8NDP4 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
ZNF439Q8NDP4 RN7SKP153-201ENST00000365026 316 ntBASIC4.35□□□□□ -1.71
ZNF439Q8NDP4 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
ZNF439Q8NDP4 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
ZNF439Q8NDP4 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
ZNF439Q8NDP4 SNORA17A-201ENST00000391185 133 ntBASIC4.35□□□□□ -1.71
ZNF439Q8NDP4 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
ZNF439Q8NDP4 RN7SKP247-201ENST00000411094 308 ntBASIC4.35□□□□□ -1.71
ZNF439Q8NDP4 NPM1P40-201ENST00000412758 733 ntBASIC4.35□□□□□ -1.71
ZNF439Q8NDP4 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC4.35□□□□□ -1.71
ZNF439Q8NDP4 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
ZNF439Q8NDP4 AL034379.1-201ENST00000423216 253 ntBASIC4.35□□□□□ -1.71
ZNF439Q8NDP4 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
ZNF439Q8NDP4 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC4.35□□□□□ -1.71
ZNF439Q8NDP4 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC4.35□□□□□ -1.71
ZNF439Q8NDP4 EIF4A1P6-201ENST00000448133 1210 ntBASIC4.35□□□□□ -1.71
ZNF439Q8NDP4 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC4.35□□□□□ -1.71
ZNF439Q8NDP4 DNAJB5P1-201ENST00000454004 806 ntBASIC4.35□□□□□ -1.71
ZNF439Q8NDP4 RPL7P41-201ENST00000485823 957 ntBASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms