Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 AC090246.1-201ENST00000616499 426 ntBASIC5.78□□□□□ -1.48
VRK3Q8IV63 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.78□□□□□ -1.48
VRK3Q8IV63 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC5.78□□□□□ -1.48
VRK3Q8IV63 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.78□□□□□ -1.48
VRK3Q8IV63 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC5.78□□□□□ -1.48
VRK3Q8IV63 NCOA4P2-201ENST00000340589 1813 ntBASIC5.78□□□□□ -1.48
VRK3Q8IV63 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC5.78□□□□□ -1.48
VRK3Q8IV63 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
VRK3Q8IV63 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC5.78□□□□□ -1.48
VRK3Q8IV63 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC5.78□□□□□ -1.48
VRK3Q8IV63 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
VRK3Q8IV63 CR382285.2-201ENST00000624662 1495 ntBASIC5.77□□□□□ -1.49
VRK3Q8IV63 AP000432.2-201ENST00000624164 2048 ntBASIC5.77□□□□□ -1.49
VRK3Q8IV63 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
VRK3Q8IV63 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC5.77□□□□□ -1.49
VRK3Q8IV63 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
VRK3Q8IV63 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
VRK3Q8IV63 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
VRK3Q8IV63 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.77□□□□□ -1.49
VRK3Q8IV63 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
VRK3Q8IV63 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC5.77□□□□□ -1.49
VRK3Q8IV63 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.77□□□□□ -1.49
VRK3Q8IV63 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.77□□□□□ -1.49
VRK3Q8IV63 DMD-228ENST00000541735 7080 ntTSL 5 BASIC5.77□□□□□ -1.49
VRK3Q8IV63 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
VRK3Q8IV63 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
VRK3Q8IV63 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
VRK3Q8IV63 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
VRK3Q8IV63 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
VRK3Q8IV63 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.77□□□□□ -1.49
VRK3Q8IV63 RN7SKP128-201ENST00000364270 303 ntBASIC5.77□□□□□ -1.49
VRK3Q8IV63 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.77□□□□□ -1.49
VRK3Q8IV63 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.77□□□□□ -1.49
VRK3Q8IV63 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC5.77□□□□□ -1.49
VRK3Q8IV63 LSM5-206ENST00000409987 504 ntTSL 5 BASIC5.77□□□□□ -1.49
VRK3Q8IV63 SNORA79B-201ENST00000410557 148 ntBASIC5.77□□□□□ -1.49
VRK3Q8IV63 RAB9AP4-201ENST00000415230 609 ntBASIC5.77□□□□□ -1.49
VRK3Q8IV63 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.77□□□□□ -1.49
VRK3Q8IV63 AC092651.1-201ENST00000426110 312 ntBASIC5.77□□□□□ -1.49
VRK3Q8IV63 AL035407.1-201ENST00000429211 571 ntBASIC5.77□□□□□ -1.49
VRK3Q8IV63 AC005345.1-201ENST00000431868 217 ntBASIC5.77□□□□□ -1.49
VRK3Q8IV63 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC5.77□□□□□ -1.49
VRK3Q8IV63 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC5.77□□□□□ -1.49
VRK3Q8IV63 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC5.77□□□□□ -1.49
VRK3Q8IV63 MTND2P21-201ENST00000436242 1042 ntBASIC5.77□□□□□ -1.49
VRK3Q8IV63 Z99127.2-201ENST00000441426 334 ntBASIC5.77□□□□□ -1.49
VRK3Q8IV63 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.77□□□□□ -1.49
VRK3Q8IV63 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.77□□□□□ -1.49
VRK3Q8IV63 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
VRK3Q8IV63 AL157884.3-201ENST00000448273 1184 ntBASIC5.77□□□□□ -1.49
VRK3Q8IV63 HLA-DPA3-207ENST00000454398 229 ntBASIC5.77□□□□□ -1.49
VRK3Q8IV63 AP002345.1-201ENST00000456493 928 ntBASIC5.77□□□□□ -1.49
VRK3Q8IV63 AC093166.4-201ENST00000457867 318 ntBASIC5.77□□□□□ -1.49
VRK3Q8IV63 AC092691.2-201ENST00000461787 803 ntBASIC5.77□□□□□ -1.49
VRK3Q8IV63 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC5.77□□□□□ -1.49
VRK3Q8IV63 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.77□□□□□ -1.49
VRK3Q8IV63 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
VRK3Q8IV63 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
VRK3Q8IV63 AC147055.3-201ENST00000510547 851 ntBASIC5.77□□□□□ -1.49
VRK3Q8IV63 MRPS33P3-201ENST00000513456 322 ntBASIC5.77□□□□□ -1.49
VRK3Q8IV63 AC110775.1-201ENST00000513721 462 ntBASIC5.77□□□□□ -1.49
VRK3Q8IV63 AC117532.1-201ENST00000514638 323 ntBASIC5.77□□□□□ -1.49
VRK3Q8IV63 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
VRK3Q8IV63 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC5.77□□□□□ -1.49
VRK3Q8IV63 TRIM77BP-201ENST00000524985 1119 ntBASIC5.77□□□□□ -1.49
VRK3Q8IV63 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC5.77□□□□□ -1.49
VRK3Q8IV63 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC5.77□□□□□ -1.49
VRK3Q8IV63 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.77□□□□□ -1.49
VRK3Q8IV63 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC5.77□□□□□ -1.49
VRK3Q8IV63 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
VRK3Q8IV63 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC5.77□□□□□ -1.49
VRK3Q8IV63 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC5.77□□□□□ -1.49
VRK3Q8IV63 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC5.77□□□□□ -1.49
VRK3Q8IV63 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC5.77□□□□□ -1.49
VRK3Q8IV63 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.77□□□□□ -1.49
VRK3Q8IV63 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC5.77□□□□□ -1.49
VRK3Q8IV63 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC5.77□□□□□ -1.49
VRK3Q8IV63 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC5.77□□□□□ -1.49
VRK3Q8IV63 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC5.77□□□□□ -1.49
VRK3Q8IV63 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC5.77□□□□□ -1.49
VRK3Q8IV63 NTAN1P1-201ENST00000603150 646 ntBASIC5.77□□□□□ -1.49
VRK3Q8IV63 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.77□□□□□ -1.49
VRK3Q8IV63 AC073387.2-201ENST00000604797 784 ntBASIC5.77□□□□□ -1.49
VRK3Q8IV63 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.77□□□□□ -1.49
VRK3Q8IV63 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.77□□□□□ -1.49
VRK3Q8IV63 AL356752.1-201ENST00000615844 593 ntBASIC5.77□□□□□ -1.49
VRK3Q8IV63 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
VRK3Q8IV63 AP000676.3-201ENST00000623299 569 ntBASIC5.77□□□□□ -1.49
VRK3Q8IV63 AC009120.7-201ENST00000623452 780 ntBASIC5.77□□□□□ -1.49
VRK3Q8IV63 AC063952.1-203ENST00000634410 658 ntBASIC5.77□□□□□ -1.49
VRK3Q8IV63 AC007671.2-201ENST00000637344 619 ntBASIC5.77□□□□□ -1.49
VRK3Q8IV63 OR8B1P-202ENST00000641132 1178 ntBASIC5.77□□□□□ -1.49
VRK3Q8IV63 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
VRK3Q8IV63 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC5.77□□□□□ -1.49
VRK3Q8IV63 AC027088.4-201ENST00000611559 1947 ntBASIC5.77□□□□□ -1.49
VRK3Q8IV63 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC5.77□□□□□ -1.49
VRK3Q8IV63 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
VRK3Q8IV63 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC5.77□□□□□ -1.49
VRK3Q8IV63 AC005261.4-201ENST00000600047 1385 ntBASIC5.77□□□□□ -1.49
VRK3Q8IV63 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms