Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 AC138649.3-201ENST00000622154 254 ntBASIC6.24□□□□□ -1.41
ATG4DQ86TL0 AC090574.1-201ENST00000623186 233 ntBASIC6.24□□□□□ -1.41
ATG4DQ86TL0 AC106782.7-201ENST00000624024 418 ntBASIC6.24□□□□□ -1.41
ATG4DQ86TL0 AC133555.5-201ENST00000624430 418 ntBASIC6.24□□□□□ -1.41
ATG4DQ86TL0 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC6.24□□□□□ -1.41
ATG4DQ86TL0 MAPK10-344ENST00000641718 3746 ntBASIC6.24□□□□□ -1.41
ATG4DQ86TL0 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
ATG4DQ86TL0 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
ATG4DQ86TL0 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
ATG4DQ86TL0 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC6.24□□□□□ -1.41
ATG4DQ86TL0 HSPD1P4-201ENST00000547203 1702 ntBASIC6.24□□□□□ -1.41
ATG4DQ86TL0 AC009812.3-201ENST00000523871 3766 ntTSL 4 BASIC6.24□□□□□ -1.41
ATG4DQ86TL0 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
ATG4DQ86TL0 QRSL1P1-201ENST00000400977 1540 ntBASIC6.24□□□□□ -1.41
ATG4DQ86TL0 PSG10P-201ENST00000501199 1500 ntBASIC6.24□□□□□ -1.41
ATG4DQ86TL0 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
ATG4DQ86TL0 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC6.24□□□□□ -1.41
ATG4DQ86TL0 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC6.24□□□□□ -1.41
ATG4DQ86TL0 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
ATG4DQ86TL0 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC6.24□□□□□ -1.41
ATG4DQ86TL0 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC6.24□□□□□ -1.41
ATG4DQ86TL0 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
ATG4DQ86TL0 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC6.23□□□□□ -1.41
ATG4DQ86TL0 MAPK10-380ENST00000642015 3137 ntAPPRIS P2 BASIC6.23□□□□□ -1.41
ATG4DQ86TL0 NPIPB9-202ENST00000550983 2123 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
ATG4DQ86TL0 AL512329.1-201ENST00000404600 1592 ntBASIC6.23□□□□□ -1.41
ATG4DQ86TL0 AC093278.2-201ENST00000564956 2485 ntBASIC6.23□□□□□ -1.41
ATG4DQ86TL0 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
ATG4DQ86TL0 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
ATG4DQ86TL0 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC6.23□□□□□ -1.41
ATG4DQ86TL0 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
ATG4DQ86TL0 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC6.23□□□□□ -1.41
ATG4DQ86TL0 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC6.23□□□□□ -1.41
ATG4DQ86TL0 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
ATG4DQ86TL0 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
ATG4DQ86TL0 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
ATG4DQ86TL0 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC6.23□□□□□ -1.41
ATG4DQ86TL0 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
ATG4DQ86TL0 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC6.23□□□□□ -1.41
ATG4DQ86TL0 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
ATG4DQ86TL0 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC6.23□□□□□ -1.41
ATG4DQ86TL0 GMFG-201ENST00000253054 616 ntTSL 5 BASIC6.23□□□□□ -1.41
ATG4DQ86TL0 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
ATG4DQ86TL0 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
ATG4DQ86TL0 RPL24P4-201ENST00000326586 421 ntBASIC6.23□□□□□ -1.41
ATG4DQ86TL0 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
ATG4DQ86TL0 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
ATG4DQ86TL0 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
ATG4DQ86TL0 ENSA-207ENST00000362052 703 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
ATG4DQ86TL0 MIR365B-201ENST00000362317 111 ntBASIC6.23□□□□□ -1.41
ATG4DQ86TL0 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
ATG4DQ86TL0 PPIAP26-201ENST00000377951 522 ntBASIC6.23□□□□□ -1.41
ATG4DQ86TL0 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC6.23□□□□□ -1.41
ATG4DQ86TL0 Y_RNA.548-201ENST00000384656 105 ntBASIC6.23□□□□□ -1.41
ATG4DQ86TL0 MIR187-201ENST00000385062 109 ntBASIC6.23□□□□□ -1.41
ATG4DQ86TL0 TRAV12-3-201ENST00000390442 399 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
ATG4DQ86TL0 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
ATG4DQ86TL0 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
ATG4DQ86TL0 PDCL3P5-201ENST00000398028 722 ntBASIC6.23□□□□□ -1.41
ATG4DQ86TL0 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
ATG4DQ86TL0 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
ATG4DQ86TL0 TPT1P2-201ENST00000413105 503 ntBASIC6.23□□□□□ -1.41
ATG4DQ86TL0 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC6.23□□□□□ -1.41
ATG4DQ86TL0 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
ATG4DQ86TL0 OR4F13P-201ENST00000428478 931 ntBASIC6.23□□□□□ -1.41
ATG4DQ86TL0 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
ATG4DQ86TL0 AC104850.1-201ENST00000435940 476 ntBASIC6.23□□□□□ -1.41
ATG4DQ86TL0 PA2G4P6-201ENST00000438325 1197 ntBASIC6.23□□□□□ -1.41
ATG4DQ86TL0 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
ATG4DQ86TL0 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC6.23□□□□□ -1.41
ATG4DQ86TL0 FAR2P1-206ENST00000449736 709 ntBASIC6.23□□□□□ -1.41
ATG4DQ86TL0 GOT2P2-201ENST00000450663 1251 ntBASIC6.23□□□□□ -1.41
ATG4DQ86TL0 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC6.23□□□□□ -1.41
ATG4DQ86TL0 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC6.23□□□□□ -1.41
ATG4DQ86TL0 RPS16P9-201ENST00000477220 427 ntBASIC6.23□□□□□ -1.41
ATG4DQ86TL0 UBTFL6-201ENST00000477929 1024 ntBASIC6.23□□□□□ -1.41
ATG4DQ86TL0 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
ATG4DQ86TL0 AC105252.1-201ENST00000503089 286 ntBASIC6.23□□□□□ -1.41
ATG4DQ86TL0 AC114967.1-201ENST00000504890 259 ntBASIC6.23□□□□□ -1.41
ATG4DQ86TL0 HMGN1P13-201ENST00000505795 138 ntBASIC6.23□□□□□ -1.41
ATG4DQ86TL0 LRRC34P2-201ENST00000514850 553 ntBASIC6.23□□□□□ -1.41
ATG4DQ86TL0 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC6.23□□□□□ -1.41
ATG4DQ86TL0 IGHVIII-11-1-201ENST00000522733 267 ntBASIC6.23□□□□□ -1.41
ATG4DQ86TL0 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC6.23□□□□□ -1.41
ATG4DQ86TL0 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC6.23□□□□□ -1.41
ATG4DQ86TL0 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC6.23□□□□□ -1.41
ATG4DQ86TL0 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC6.23□□□□□ -1.41
ATG4DQ86TL0 AC092375.1-201ENST00000550410 637 ntBASIC6.23□□□□□ -1.41
ATG4DQ86TL0 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC6.23□□□□□ -1.41
ATG4DQ86TL0 HMGN1P26-201ENST00000558737 303 ntBASIC6.23□□□□□ -1.41
ATG4DQ86TL0 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC6.23□□□□□ -1.41
ATG4DQ86TL0 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC6.23□□□□□ -1.41
ATG4DQ86TL0 MIR4795-201ENST00000584182 89 ntBASIC6.23□□□□□ -1.41
ATG4DQ86TL0 MIR5682-201ENST00000584864 76 ntBASIC6.23□□□□□ -1.41
ATG4DQ86TL0 MIR548AB-201ENST00000584917 84 ntBASIC6.23□□□□□ -1.41
ATG4DQ86TL0 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC6.23□□□□□ -1.41
ATG4DQ86TL0 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC6.23□□□□□ -1.41
ATG4DQ86TL0 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC6.23□□□□□ -1.41
ATG4DQ86TL0 BNIP3P11-201ENST00000603878 563 ntBASIC6.23□□□□□ -1.41
ATG4DQ86TL0 AC004908.1-201ENST00000606572 541 ntBASIC6.23□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms