Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 UBTFL9-201ENST00000534504 1148 ntBASIC5.41□□□□□ -1.54
RPS3AP61247 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
RPS3AP61247 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.41□□□□□ -1.54
RPS3AP61247 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC5.41□□□□□ -1.54
RPS3AP61247 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC5.41□□□□□ -1.54
RPS3AP61247 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.41□□□□□ -1.54
RPS3AP61247 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC5.41□□□□□ -1.54
RPS3AP61247 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC5.41□□□□□ -1.54
RPS3AP61247 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.41□□□□□ -1.54
RPS3AP61247 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC5.41□□□□□ -1.54
RPS3AP61247 AP005262.1-201ENST00000582646 997 ntBASIC5.41□□□□□ -1.54
RPS3AP61247 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC5.41□□□□□ -1.54
RPS3AP61247 AC005034.4-201ENST00000603612 899 ntBASIC5.41□□□□□ -1.54
RPS3AP61247 AL136131.3-201ENST00000607600 188 ntBASIC5.41□□□□□ -1.54
RPS3AP61247 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC5.41□□□□□ -1.54
RPS3AP61247 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RPS3AP61247 AC011755.1-201ENST00000623763 2049 ntBASIC5.41□□□□□ -1.54
RPS3AP61247 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RPS3AP61247 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.41□□□□□ -1.54
RPS3AP61247 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RPS3AP61247 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RPS3AP61247 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RPS3AP61247 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RPS3AP61247 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.41□□□□□ -1.54
RPS3AP61247 AC073136.1-201ENST00000449426 2884 ntBASIC5.41□□□□□ -1.54
RPS3AP61247 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
RPS3AP61247 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.41□□□□□ -1.54
RPS3AP61247 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
RPS3AP61247 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.4□□□□□ -1.54
RPS3AP61247 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
RPS3AP61247 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.4□□□□□ -1.54
RPS3AP61247 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC5.4□□□□□ -1.54
RPS3AP61247 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.4□□□□□ -1.54
RPS3AP61247 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.54
RPS3AP61247 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
RPS3AP61247 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
RPS3AP61247 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.54
RPS3AP61247 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
RPS3AP61247 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
RPS3AP61247 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
RPS3AP61247 RN7SKP128-201ENST00000364270 303 ntBASIC5.4□□□□□ -1.54
RPS3AP61247 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
RPS3AP61247 RPS27AP11-201ENST00000402798 447 ntBASIC5.4□□□□□ -1.54
RPS3AP61247 HYALP1-201ENST00000417674 1279 ntBASIC5.4□□□□□ -1.54
RPS3AP61247 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.4□□□□□ -1.54
RPS3AP61247 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.4□□□□□ -1.54
RPS3AP61247 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC5.4□□□□□ -1.54
RPS3AP61247 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC5.4□□□□□ -1.54
RPS3AP61247 CUBNP2-201ENST00000443534 1139 ntBASIC5.4□□□□□ -1.54
RPS3AP61247 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
RPS3AP61247 CLIC4P1-201ENST00000453177 535 ntBASIC5.4□□□□□ -1.54
RPS3AP61247 CBX1P2-201ENST00000453841 458 ntBASIC5.4□□□□□ -1.54
RPS3AP61247 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.4□□□□□ -1.54
RPS3AP61247 AC023245.1-201ENST00000468501 517 ntBASIC5.4□□□□□ -1.54
RPS3AP61247 AC015908.1-201ENST00000478739 476 ntBASIC5.4□□□□□ -1.54
RPS3AP61247 CCDC11P1-201ENST00000503137 1162 ntBASIC5.4□□□□□ -1.54
RPS3AP61247 AC016550.1-201ENST00000505348 785 ntBASIC5.4□□□□□ -1.54
RPS3AP61247 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC5.4□□□□□ -1.54
RPS3AP61247 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.4□□□□□ -1.54
RPS3AP61247 RN7SKP288-201ENST00000516227 268 ntBASIC5.4□□□□□ -1.54
RPS3AP61247 RNA5SP340-201ENST00000517132 107 ntBASIC5.4□□□□□ -1.54
RPS3AP61247 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC5.4□□□□□ -1.54
RPS3AP61247 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.4□□□□□ -1.54
RPS3AP61247 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.4□□□□□ -1.54
RPS3AP61247 TRIM77BP-201ENST00000524985 1119 ntBASIC5.4□□□□□ -1.54
RPS3AP61247 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC5.4□□□□□ -1.54
RPS3AP61247 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC5.4□□□□□ -1.54
RPS3AP61247 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.4□□□□□ -1.54
RPS3AP61247 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC5.4□□□□□ -1.54
RPS3AP61247 AP005119.1-201ENST00000580956 292 ntBASIC5.4□□□□□ -1.54
RPS3AP61247 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.4□□□□□ -1.54
RPS3AP61247 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.4□□□□□ -1.54
RPS3AP61247 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.4□□□□□ -1.54
RPS3AP61247 AC119403.2-201ENST00000590960 598 ntBASIC5.4□□□□□ -1.54
RPS3AP61247 AC108673.3-201ENST00000609183 335 ntBASIC5.4□□□□□ -1.54
RPS3AP61247 MIR6793-201ENST00000612376 63 ntBASIC5.4□□□□□ -1.54
RPS3AP61247 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC5.4□□□□□ -1.54
RPS3AP61247 MIR6133-201ENST00000617057 108 ntBASIC5.4□□□□□ -1.54
RPS3AP61247 AP004607.9-201ENST00000618202 316 ntBASIC5.4□□□□□ -1.54
RPS3AP61247 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
RPS3AP61247 AL357562.1-201ENST00000624911 609 ntBASIC5.4□□□□□ -1.54
RPS3AP61247 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC5.4□□□□□ -1.54
RPS3AP61247 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.54
RPS3AP61247 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.4□□□□□ -1.55
RPS3AP61247 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.4□□□□□ -1.55
RPS3AP61247 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.4□□□□□ -1.55
RPS3AP61247 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
RPS3AP61247 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
RPS3AP61247 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.4□□□□□ -1.55
RPS3AP61247 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
RPS3AP61247 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.55
RPS3AP61247 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
RPS3AP61247 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.4□□□□□ -1.55
RPS3AP61247 CASC19-248ENST00000641674 1356 ntBASIC5.4□□□□□ -1.55
RPS3AP61247 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
RPS3AP61247 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
RPS3AP61247 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.39□□□□□ -1.55
RPS3AP61247 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RPS3AP61247 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RPS3AP61247 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms