Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
RIPK4P57078 AL645927.1-201ENST00000396783 406 ntBASIC6.76□□□□□ -1.33
RIPK4P57078 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC6.76□□□□□ -1.33
RIPK4P57078 RN7SKP114-201ENST00000410327 279 ntBASIC6.76□□□□□ -1.33
RIPK4P57078 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC6.76□□□□□ -1.33
RIPK4P57078 MGAT2P2-201ENST00000427194 797 ntBASIC6.76□□□□□ -1.33
RIPK4P57078 BRWD1P3-201ENST00000428816 390 ntBASIC6.76□□□□□ -1.33
RIPK4P57078 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC6.76□□□□□ -1.33
RIPK4P57078 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC6.76□□□□□ -1.33
RIPK4P57078 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC6.76□□□□□ -1.33
RIPK4P57078 AC073850.1-201ENST00000449243 255 ntBASIC6.76□□□□□ -1.33
RIPK4P57078 AC093270.2-201ENST00000486157 792 ntBASIC6.76□□□□□ -1.33
RIPK4P57078 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC6.76□□□□□ -1.33
RIPK4P57078 AC097173.1-201ENST00000505862 819 ntBASIC6.76□□□□□ -1.33
RIPK4P57078 IGHVII-44-2-201ENST00000517728 250 ntBASIC6.76□□□□□ -1.33
RIPK4P57078 AC027369.5-201ENST00000533838 755 ntBASIC6.76□□□□□ -1.33
RIPK4P57078 AC092490.3-201ENST00000545370 572 ntBASIC6.76□□□□□ -1.33
RIPK4P57078 WDR61-205ENST00000558459 884 ntTSL 3 BASIC6.76□□□□□ -1.33
RIPK4P57078 AC104574.1-201ENST00000561182 925 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
RIPK4P57078 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
RIPK4P57078 AC092944.2-201ENST00000605443 889 ntBASIC6.76□□□□□ -1.33
RIPK4P57078 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
RIPK4P57078 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
RIPK4P57078 TMED2-203ENST00000509052 1975 ntTSL 2 BASIC6.76□□□□□ -1.33
RIPK4P57078 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC6.76□□□□□ -1.33
RIPK4P57078 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
RIPK4P57078 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
RIPK4P57078 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
RIPK4P57078 CR383656.5-201ENST00000547616 1340 ntBASIC6.76□□□□□ -1.33
RIPK4P57078 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
RIPK4P57078 RNA5SP305-201ENST00000362665 119 ntBASIC6.75□□□□□ -1.33
RIPK4P57078 AC093162.1-201ENST00000419682 124 ntBASIC6.75□□□□□ -1.33
RIPK4P57078 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC6.75□□□□□ -1.33
RIPK4P57078 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC6.75□□□□□ -1.33
RIPK4P57078 GAPDHP58-201ENST00000438477 1006 ntBASIC6.75□□□□□ -1.33
RIPK4P57078 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC6.75□□□□□ -1.33
RIPK4P57078 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC6.75□□□□□ -1.33
RIPK4P57078 RPL32P9-201ENST00000487963 407 ntBASIC6.75□□□□□ -1.33
RIPK4P57078 NDUFA5P12-201ENST00000503796 343 ntBASIC6.75□□□□□ -1.33
RIPK4P57078 AC004980.4-201ENST00000513375 203 ntBASIC6.75□□□□□ -1.33
RIPK4P57078 AC110775.1-201ENST00000513721 462 ntBASIC6.75□□□□□ -1.33
RIPK4P57078 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC6.75□□□□□ -1.33
RIPK4P57078 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC6.75□□□□□ -1.33
RIPK4P57078 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC6.75□□□□□ -1.33
RIPK4P57078 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC6.75□□□□□ -1.33
RIPK4P57078 AC010503.3-201ENST00000594355 540 ntBASIC6.75□□□□□ -1.33
RIPK4P57078 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
RIPK4P57078 BNIP3P35-201ENST00000604530 490 ntBASIC6.75□□□□□ -1.33
RIPK4P57078 AC037198.3-201ENST00000616754 526 ntBASIC6.75□□□□□ -1.33
RIPK4P57078 AP002799.1-201ENST00000623552 423 ntBASIC6.75□□□□□ -1.33
RIPK4P57078 TEX41-254ENST00000626394 423 ntTSL 5 BASIC6.75□□□□□ -1.33
RIPK4P57078 HSPA8P18-201ENST00000439846 1928 ntBASIC6.75□□□□□ -1.33
RIPK4P57078 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
RIPK4P57078 Z95114.1-201ENST00000624264 14574 ntBASIC6.75□□□□□ -1.33
RIPK4P57078 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC6.75□□□□□ -1.33
RIPK4P57078 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
RIPK4P57078 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
RIPK4P57078 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
RIPK4P57078 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
RIPK4P57078 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC6.74□□□□□ -1.33
RIPK4P57078 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
RIPK4P57078 THAP12P4-201ENST00000528321 2266 ntBASIC6.74□□□□□ -1.33
RIPK4P57078 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
RIPK4P57078 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
RIPK4P57078 AC092376.2-201ENST00000622621 4116 ntBASIC6.74□□□□□ -1.33
RIPK4P57078 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
RIPK4P57078 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC6.74□□□□□ -1.33
RIPK4P57078 SNORA58B-201ENST00000364259 136 ntBASIC6.74□□□□□ -1.33
RIPK4P57078 RNA5SP223-201ENST00000365174 120 ntBASIC6.74□□□□□ -1.33
RIPK4P57078 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC6.74□□□□□ -1.33
RIPK4P57078 RNU6ATAC7P-201ENST00000408111 127 ntBASIC6.74□□□□□ -1.33
RIPK4P57078 AC007394.1-201ENST00000421941 531 ntBASIC6.74□□□□□ -1.33
RIPK4P57078 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC6.74□□□□□ -1.33
RIPK4P57078 RPL34P20-201ENST00000442771 351 ntBASIC6.74□□□□□ -1.33
RIPK4P57078 KNOP1P3-201ENST00000446933 426 ntBASIC6.74□□□□□ -1.33
RIPK4P57078 BX842559.2-201ENST00000451418 605 ntBASIC6.74□□□□□ -1.33
RIPK4P57078 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
RIPK4P57078 AC008410.1-201ENST00000483777 339 ntBASIC6.74□□□□□ -1.33
RIPK4P57078 HMGN2P25-201ENST00000486956 268 ntBASIC6.74□□□□□ -1.33
RIPK4P57078 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC6.74□□□□□ -1.33
RIPK4P57078 RNA5SP230-201ENST00000517039 122 ntBASIC6.74□□□□□ -1.33
RIPK4P57078 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC6.74□□□□□ -1.33
RIPK4P57078 NOP10-202ENST00000557912 436 ntTSL 2 BASIC6.74□□□□□ -1.33
RIPK4P57078 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
RIPK4P57078 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
RIPK4P57078 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC6.74□□□□□ -1.33
RIPK4P57078 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC6.74□□□□□ -1.33
RIPK4P57078 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
RIPK4P57078 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
RIPK4P57078 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC6.74□□□□□ -1.33
RIPK4P57078 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
RIPK4P57078 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
RIPK4P57078 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
RIPK4P57078 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
RIPK4P57078 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
RIPK4P57078 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
RIPK4P57078 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
RIPK4P57078 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
RIPK4P57078 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC6.73□□□□□ -1.33
RIPK4P57078 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 153.8 ms