Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC6.26□□□□□ -1.41
NUP98P52948 CEACAMP10-202ENST00000495431 496 ntBASIC6.26□□□□□ -1.41
NUP98P52948 RN7SKP276-201ENST00000516242 268 ntBASIC6.26□□□□□ -1.41
NUP98P52948 AL110118.1-201ENST00000553543 400 ntBASIC6.26□□□□□ -1.41
NUP98P52948 AL049839.1-201ENST00000556151 657 ntBASIC6.26□□□□□ -1.41
NUP98P52948 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC6.26□□□□□ -1.41
NUP98P52948 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC6.26□□□□□ -1.41
NUP98P52948 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
NUP98P52948 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC6.26□□□□□ -1.41
NUP98P52948 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC6.26□□□□□ -1.41
NUP98P52948 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
NUP98P52948 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
NUP98P52948 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC6.26□□□□□ -1.41
NUP98P52948 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.26□□□□□ -1.41
NUP98P52948 AC068733.2-201ENST00000605434 1418 ntBASIC6.26□□□□□ -1.41
NUP98P52948 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
NUP98P52948 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
NUP98P52948 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
NUP98P52948 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
NUP98P52948 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC6.25□□□□□ -1.41
NUP98P52948 AC068538.1-201ENST00000376856 336 ntBASIC6.25□□□□□ -1.41
NUP98P52948 U3.32-201ENST00000408116 212 ntBASIC6.25□□□□□ -1.41
NUP98P52948 SCAND3P1-201ENST00000439854 1060 ntBASIC6.25□□□□□ -1.41
NUP98P52948 TPT1P13-201ENST00000449760 499 ntBASIC6.25□□□□□ -1.41
NUP98P52948 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC6.25□□□□□ -1.41
NUP98P52948 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC6.25□□□□□ -1.41
NUP98P52948 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC6.25□□□□□ -1.41
NUP98P52948 AC092709.1-201ENST00000521355 1045 ntBASIC6.25□□□□□ -1.41
NUP98P52948 AC008147.3-201ENST00000548666 354 ntBASIC6.25□□□□□ -1.41
NUP98P52948 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC6.25□□□□□ -1.41
NUP98P52948 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC6.25□□□□□ -1.41
NUP98P52948 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC6.25□□□□□ -1.41
NUP98P52948 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC6.25□□□□□ -1.41
NUP98P52948 AL161616.1-201ENST00000611867 286 ntBASIC6.25□□□□□ -1.41
NUP98P52948 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC6.25□□□□□ -1.41
NUP98P52948 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
NUP98P52948 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
NUP98P52948 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
NUP98P52948 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
NUP98P52948 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
NUP98P52948 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
NUP98P52948 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
NUP98P52948 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC6.25□□□□□ -1.41
NUP98P52948 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
NUP98P52948 AL117339.4-201ENST00000608335 7063 ntBASIC6.25□□□□□ -1.41
NUP98P52948 AL390316.1-201ENST00000406279 553 ntBASIC6.25□□□□□ -1.41
NUP98P52948 AL359265.1-201ENST00000440296 795 ntBASIC6.25□□□□□ -1.41
NUP98P52948 AC104971.1-201ENST00000495117 578 ntBASIC6.25□□□□□ -1.41
NUP98P52948 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC6.25□□□□□ -1.41
NUP98P52948 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC6.25□□□□□ -1.41
NUP98P52948 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC6.25□□□□□ -1.41
NUP98P52948 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC6.25□□□□□ -1.41
NUP98P52948 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC6.25□□□□□ -1.41
NUP98P52948 AC111000.6-201ENST00000514471 709 ntBASIC6.25□□□□□ -1.41
NUP98P52948 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC6.25□□□□□ -1.41
NUP98P52948 AC027369.5-201ENST00000533838 755 ntBASIC6.25□□□□□ -1.41
NUP98P52948 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC6.25□□□□□ -1.41
NUP98P52948 AC093388.1-201ENST00000609166 430 ntBASIC6.25□□□□□ -1.41
NUP98P52948 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
NUP98P52948 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
NUP98P52948 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC6.24□□□□□ -1.41
NUP98P52948 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
NUP98P52948 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
NUP98P52948 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
NUP98P52948 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
NUP98P52948 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
NUP98P52948 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC6.24□□□□□ -1.41
NUP98P52948 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
NUP98P52948 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC6.24□□□□□ -1.41
NUP98P52948 FAM3C2-201ENST00000312214 681 ntBASIC6.24□□□□□ -1.41
NUP98P52948 RN7SKP16-201ENST00000410180 299 ntBASIC6.24□□□□□ -1.41
NUP98P52948 RNU2-50P-201ENST00000410494 143 ntBASIC6.24□□□□□ -1.41
NUP98P52948 AC119751.6-201ENST00000416712 186 ntBASIC6.24□□□□□ -1.41
NUP98P52948 AL359265.2-201ENST00000434367 631 ntBASIC6.24□□□□□ -1.41
NUP98P52948 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC6.24□□□□□ -1.41
NUP98P52948 AC116562.1-201ENST00000485355 781 ntBASIC6.24□□□□□ -1.41
NUP98P52948 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
NUP98P52948 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC6.24□□□□□ -1.41
NUP98P52948 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC6.24□□□□□ -1.41
NUP98P52948 AL022401.1-201ENST00000619498 108 ntBASIC6.24□□□□□ -1.41
NUP98P52948 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC6.24□□□□□ -1.41
NUP98P52948 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC6.24□□□□□ -1.41
NUP98P52948 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC6.24□□□□□ -1.41
NUP98P52948 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
NUP98P52948 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
NUP98P52948 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
NUP98P52948 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC6.23□□□□□ -1.41
NUP98P52948 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC6.23□□□□□ -1.41
NUP98P52948 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC6.23□□□□□ -1.41
NUP98P52948 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
NUP98P52948 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
NUP98P52948 NCLP2-201ENST00000416078 1462 ntBASIC6.23□□□□□ -1.41
NUP98P52948 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
NUP98P52948 SETD5-205ENST00000407969 6463 ntTSL 5 BASIC6.23□□□□□ -1.41
NUP98P52948 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
NUP98P52948 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
NUP98P52948 FABP7P1-201ENST00000424004 391 ntBASIC6.23□□□□□ -1.41
NUP98P52948 RPL12P20-201ENST00000475538 479 ntBASIC6.23□□□□□ -1.41
NUP98P52948 OR2A3P-201ENST00000493774 953 ntBASIC6.23□□□□□ -1.41
NUP98P52948 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms