Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC6.04□□□□□ -1.44
NEDD4P46934 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC6.04□□□□□ -1.44
NEDD4P46934 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC6.04□□□□□ -1.44
NEDD4P46934 NAP1L4P1-201ENST00000319092 1157 ntBASIC6.04□□□□□ -1.44
NEDD4P46934 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
NEDD4P46934 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
NEDD4P46934 AL390316.1-201ENST00000406279 553 ntBASIC6.04□□□□□ -1.44
NEDD4P46934 DNAJA1P4-201ENST00000406473 1166 ntBASIC6.04□□□□□ -1.44
NEDD4P46934 U3.32-201ENST00000408116 212 ntBASIC6.04□□□□□ -1.44
NEDD4P46934 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC6.04□□□□□ -1.44
NEDD4P46934 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC6.04□□□□□ -1.44
NEDD4P46934 SMC4P1-201ENST00000414479 527 ntBASIC6.04□□□□□ -1.44
NEDD4P46934 HMGN2P27-201ENST00000427352 270 ntBASIC6.04□□□□□ -1.44
NEDD4P46934 AC097484.1-201ENST00000471148 389 ntBASIC6.04□□□□□ -1.44
NEDD4P46934 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC6.04□□□□□ -1.44
NEDD4P46934 AC005412.2-201ENST00000492004 341 ntBASIC6.04□□□□□ -1.44
NEDD4P46934 OR5M14P-201ENST00000506803 618 ntBASIC6.04□□□□□ -1.44
NEDD4P46934 IGHVII-44-2-201ENST00000517728 250 ntBASIC6.04□□□□□ -1.44
NEDD4P46934 AC027308.1-201ENST00000517993 110 ntBASIC6.04□□□□□ -1.44
NEDD4P46934 AC092490.3-201ENST00000545370 572 ntBASIC6.04□□□□□ -1.44
NEDD4P46934 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC6.04□□□□□ -1.44
NEDD4P46934 LSM3P2-201ENST00000551246 273 ntBASIC6.04□□□□□ -1.44
NEDD4P46934 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC6.04□□□□□ -1.44
NEDD4P46934 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC6.04□□□□□ -1.44
NEDD4P46934 MIR4691-201ENST00000583764 85 ntBASIC6.04□□□□□ -1.44
NEDD4P46934 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC6.04□□□□□ -1.44
NEDD4P46934 AC108359.1-201ENST00000616451 1211 ntBASIC6.04□□□□□ -1.44
NEDD4P46934 AC091932.2-201ENST00000623014 291 ntBASIC6.04□□□□□ -1.44
NEDD4P46934 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
NEDD4P46934 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
NEDD4P46934 AC004817.4-201ENST00000602396 3625 ntBASIC6.04□□□□□ -1.44
NEDD4P46934 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
NEDD4P46934 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
NEDD4P46934 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
NEDD4P46934 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
NEDD4P46934 PCAT14-202ENST00000627127 3935 ntBASIC6.04□□□□□ -1.44
NEDD4P46934 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
NEDD4P46934 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
NEDD4P46934 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
NEDD4P46934 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC6.04□□□□□ -1.44
NEDD4P46934 PHACTR2P1-201ENST00000605639 1414 ntBASIC6.04□□□□□ -1.44
NEDD4P46934 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
NEDD4P46934 AMELX-201ENST00000348912 737 ntTSL 5 BASIC6.03□□□□□ -1.44
NEDD4P46934 AC007618.1-201ENST00000366455 732 ntBASIC6.03□□□□□ -1.44
NEDD4P46934 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
NEDD4P46934 RNU6ATAC7P-201ENST00000408111 127 ntBASIC6.03□□□□□ -1.44
NEDD4P46934 RN7SKP213-201ENST00000410746 298 ntBASIC6.03□□□□□ -1.44
NEDD4P46934 RPL23AP27-201ENST00000415161 451 ntBASIC6.03□□□□□ -1.44
NEDD4P46934 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC6.03□□□□□ -1.44
NEDD4P46934 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC6.03□□□□□ -1.44
NEDD4P46934 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
NEDD4P46934 PSMD10P3-201ENST00000437000 448 ntBASIC6.03□□□□□ -1.44
NEDD4P46934 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
NEDD4P46934 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC6.03□□□□□ -1.44
NEDD4P46934 AC026348.1-201ENST00000462549 1053 ntBASIC6.03□□□□□ -1.44
NEDD4P46934 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC6.03□□□□□ -1.44
NEDD4P46934 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC6.03□□□□□ -1.44
NEDD4P46934 FGB-207ENST00000509493 1164 ntTSL 5 BASIC6.03□□□□□ -1.44
NEDD4P46934 AC004980.4-201ENST00000513375 203 ntBASIC6.03□□□□□ -1.44
NEDD4P46934 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC6.03□□□□□ -1.44
NEDD4P46934 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC6.03□□□□□ -1.44
NEDD4P46934 EIF4EP5-201ENST00000528228 640 ntBASIC6.03□□□□□ -1.44
NEDD4P46934 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC6.03□□□□□ -1.44
NEDD4P46934 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC6.03□□□□□ -1.44
NEDD4P46934 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC6.03□□□□□ -1.44
NEDD4P46934 AC073869.10-201ENST00000642016 354 ntBASIC6.03□□□□□ -1.44
NEDD4P46934 GKN2-202ENST00000481498 1498 ntTSL 2 BASIC6.03□□□□□ -1.44
NEDD4P46934 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC6.03□□□□□ -1.44
NEDD4P46934 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
NEDD4P46934 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC6.03□□□□□ -1.44
NEDD4P46934 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
NEDD4P46934 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
NEDD4P46934 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC6.03□□□□□ -1.44
NEDD4P46934 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
NEDD4P46934 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC6.03□□□□□ -1.44
NEDD4P46934 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
NEDD4P46934 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
NEDD4P46934 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC6.02□□□□□ -1.45
NEDD4P46934 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
NEDD4P46934 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
NEDD4P46934 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
NEDD4P46934 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
NEDD4P46934 SNORA2.3-201ENST00000383920 135 ntBASIC6.02□□□□□ -1.45
NEDD4P46934 SNORA77-201ENST00000408716 125 ntBASIC6.02□□□□□ -1.45
NEDD4P46934 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC6.02□□□□□ -1.45
NEDD4P46934 DDX39BP1-205ENST00000422507 192 ntBASIC6.02□□□□□ -1.45
NEDD4P46934 AC009238.2-201ENST00000431026 355 ntBASIC6.02□□□□□ -1.45
NEDD4P46934 KNOP1P3-201ENST00000446933 426 ntBASIC6.02□□□□□ -1.45
NEDD4P46934 NIFKP7-201ENST00000503365 834 ntBASIC6.02□□□□□ -1.45
NEDD4P46934 ENPP7P11-201ENST00000505915 627 ntBASIC6.02□□□□□ -1.45
NEDD4P46934 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
NEDD4P46934 AC013701.1-201ENST00000522657 465 ntBASIC6.02□□□□□ -1.45
NEDD4P46934 HMGN2P6-201ENST00000551091 273 ntBASIC6.02□□□□□ -1.45
NEDD4P46934 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC6.02□□□□□ -1.45
NEDD4P46934 AC044860.2-201ENST00000561005 179 ntBASIC6.02□□□□□ -1.45
NEDD4P46934 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC6.02□□□□□ -1.45
NEDD4P46934 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC6.02□□□□□ -1.45
NEDD4P46934 AC087763.1-201ENST00000603391 286 ntBASIC6.02□□□□□ -1.45
NEDD4P46934 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC6.02□□□□□ -1.45
NEDD4P46934 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms