Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC5.39□□□□□ -1.55
HTTP42858 MIR4301-201ENST00000577203 66 ntBASIC5.39□□□□□ -1.55
HTTP42858 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC5.39□□□□□ -1.55
HTTP42858 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HTTP42858 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HTTP42858 USP29-201ENST00000254181 3705 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HTTP42858 TENM2-205ENST00000519204 9427 ntTSL 5 BASIC5.39□□□□□ -1.55
HTTP42858 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC5.39□□□□□ -1.55
HTTP42858 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
HTTP42858 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.39□□□□□ -1.55
HTTP42858 CHST12-201ENST00000258711 15979 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HTTP42858 IYD-201ENST00000229447 7513 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HTTP42858 Z99129.3-201ENST00000624363 6430 ntTSL 2 BASIC5.39□□□□□ -1.55
HTTP42858 STAB2-201ENST00000388887 8251 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HTTP42858 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
HTTP42858 ATP2B4-203ENST00000357681 8968 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HTTP42858 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC5.39□□□□□ -1.55
HTTP42858 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.39□□□□□ -1.55
HTTP42858 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC5.39□□□□□ -1.55
HTTP42858 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC5.39□□□□□ -1.55
HTTP42858 HNRNPRP2-201ENST00000528421 743 ntBASIC5.39□□□□□ -1.55
HTTP42858 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC5.39□□□□□ -1.55
HTTP42858 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC5.39□□□□□ -1.55
HTTP42858 AL133338.2-201ENST00000604292 736 ntBASIC5.39□□□□□ -1.55
HTTP42858 AL023881.1-201ENST00000621088 301 ntBASIC5.39□□□□□ -1.55
HTTP42858 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HTTP42858 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HTTP42858 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
HTTP42858 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.39□□□□□ -1.55
HTTP42858 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HTTP42858 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HTTP42858 LRRC37A6P-202ENST00000448648 5444 ntBASIC5.39□□□□□ -1.55
HTTP42858 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HTTP42858 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC5.39□□□□□ -1.55
HTTP42858 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC5.39□□□□□ -1.55
HTTP42858 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.39□□□□□ -1.55
HTTP42858 ZRANB1-201ENST00000359653 5695 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HTTP42858 CFLAR-201ENST00000309955 14672 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
HTTP42858 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HTTP42858 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HTTP42858 CA5A-201ENST00000309893 7567 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HTTP42858 EEA1-201ENST00000322349 9875 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HTTP42858 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.39□□□□□ -1.55
HTTP42858 ITPR1-201ENST00000302640 10197 ntAPPRIS ALT1 TSL 5 BASIC5.39□□□□□ -1.55
HTTP42858 ZNF592-201ENST00000299927 7863 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
HTTP42858 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
HTTP42858 MR1-208ENST00000614012 7860 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
HTTP42858 AC073365.1-203ENST00000641055 1992 ntBASIC5.38□□□□□ -1.55
HTTP42858 CDH8-203ENST00000577390 9721 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HTTP42858 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
HTTP42858 RUNX1T1-252ENST00000617740 7627 ntAPPRIS P3 TSL 5 BASIC5.38□□□□□ -1.55
HTTP42858 SALL4P2-201ENST00000423288 2910 ntBASIC5.38□□□□□ -1.55
HTTP42858 TBCAP2-201ENST00000416175 326 ntBASIC5.38□□□□□ -1.55
HTTP42858 MTND4LP2-201ENST00000502312 285 ntBASIC5.38□□□□□ -1.55
HTTP42858 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC5.38□□□□□ -1.55
HTTP42858 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC5.38□□□□□ -1.55
HTTP42858 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC5.38□□□□□ -1.55
HTTP42858 AC010424.2-201ENST00000607594 443 ntBASIC5.38□□□□□ -1.55
HTTP42858 MIR6839-201ENST00000620425 113 ntBASIC5.38□□□□□ -1.55
HTTP42858 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.38□□□□□ -1.55
HTTP42858 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
HTTP42858 AL359195.2-201ENST00000623657 4412 ntBASIC5.38□□□□□ -1.55
HTTP42858 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HTTP42858 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HTTP42858 FMNL3-201ENST00000335154 12634 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
HTTP42858 FRMD6-202ENST00000356218 4768 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HTTP42858 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HTTP42858 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HTTP42858 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
HTTP42858 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HTTP42858 RNU1-94P-201ENST00000362627 173 ntBASIC5.38□□□□□ -1.55
HTTP42858 SNORA70H-201ENST00000383910 135 ntBASIC5.38□□□□□ -1.55
HTTP42858 SNORA70J-201ENST00000384182 135 ntBASIC5.38□□□□□ -1.55
HTTP42858 SNORA48.4-201ENST00000391089 134 ntBASIC5.38□□□□□ -1.55
HTTP42858 AL390316.1-201ENST00000406279 553 ntBASIC5.38□□□□□ -1.55
HTTP42858 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC5.38□□□□□ -1.55
HTTP42858 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.38□□□□□ -1.55
HTTP42858 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
HTTP42858 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.38□□□□□ -1.55
HTTP42858 ASB15-206ENST00000451558 4788 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
HTTP42858 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC5.38□□□□□ -1.55
HTTP42858 DNAH11-212ENST00000620169 13670 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
HTTP42858 TTC7B-201ENST00000328459 19458 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HTTP42858 PRDM11-206ENST00000622142 10730 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
HTTP42858 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC5.37□□□□□ -1.55
HTTP42858 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
HTTP42858 OR1L6-202ENST00000373684 1044 ntBASIC5.37□□□□□ -1.55
HTTP42858 OR13Z1P-201ENST00000416141 834 ntBASIC5.37□□□□□ -1.55
HTTP42858 TMBIM7P-201ENST00000418074 855 ntBASIC5.37□□□□□ -1.55
HTTP42858 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.37□□□□□ -1.55
HTTP42858 RN7SL98P-201ENST00000462271 300 ntBASIC5.37□□□□□ -1.55
HTTP42858 RPL7P41-201ENST00000485823 957 ntBASIC5.37□□□□□ -1.55
HTTP42858 AC096754.1-201ENST00000508904 818 ntBASIC5.37□□□□□ -1.55
HTTP42858 TEK-204ENST00000519097 3836 ntTSL 2 BASIC5.37□□□□□ -1.55
HTTP42858 AL022401.1-201ENST00000619498 108 ntBASIC5.37□□□□□ -1.55
HTTP42858 CDRT1-208ENST00000630868 794 ntBASIC5.37□□□□□ -1.55
HTTP42858 FAT4-201ENST00000335110 9669 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HTTP42858 TMEM192-201ENST00000306480 10012 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HTTP42858 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.37□□□□□ -1.55
HTTP42858 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms