Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.15□□□□□ -1.59
RORAP35398 SCARNA16.4-201ENST00000516956 187 ntBASIC5.15□□□□□ -1.59
RORAP35398 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.15□□□□□ -1.59
RORAP35398 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.15□□□□□ -1.59
RORAP35398 OR8A2P-201ENST00000528631 952 ntBASIC5.15□□□□□ -1.59
RORAP35398 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
RORAP35398 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.15□□□□□ -1.59
RORAP35398 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC5.15□□□□□ -1.59
RORAP35398 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.15□□□□□ -1.59
RORAP35398 AC009237.13-201ENST00000603193 276 ntBASIC5.15□□□□□ -1.59
RORAP35398 AC119501.1-201ENST00000603646 475 ntBASIC5.15□□□□□ -1.59
RORAP35398 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
RORAP35398 AC126915.2-201ENST00000610957 190 ntBASIC5.15□□□□□ -1.59
RORAP35398 AL139407.1-201ENST00000613826 1175 ntBASIC5.15□□□□□ -1.59
RORAP35398 AC037198.3-201ENST00000616754 526 ntBASIC5.15□□□□□ -1.59
RORAP35398 AC005618.4-201ENST00000625053 554 ntBASIC5.15□□□□□ -1.59
RORAP35398 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC5.15□□□□□ -1.59
RORAP35398 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.15□□□□□ -1.59
RORAP35398 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
RORAP35398 AC006206.1-201ENST00000544842 3387 ntBASIC5.15□□□□□ -1.59
RORAP35398 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
RORAP35398 CR383656.5-201ENST00000547616 1340 ntBASIC5.15□□□□□ -1.59
RORAP35398 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
RORAP35398 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
RORAP35398 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.15□□□□□ -1.59
RORAP35398 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
RORAP35398 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
RORAP35398 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
RORAP35398 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.59
RORAP35398 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
RORAP35398 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RORAP35398 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
RORAP35398 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RORAP35398 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.14□□□□□ -1.59
RORAP35398 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
RORAP35398 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
RORAP35398 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RORAP35398 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RORAP35398 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.14□□□□□ -1.59
RORAP35398 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
RORAP35398 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RORAP35398 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.14□□□□□ -1.59
RORAP35398 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
RORAP35398 RN7SKP74-201ENST00000362849 309 ntBASIC5.14□□□□□ -1.59
RORAP35398 U8.4-201ENST00000363626 134 ntBASIC5.14□□□□□ -1.59
RORAP35398 SNORA74A-201ENST00000364089 198 ntBASIC5.14□□□□□ -1.59
RORAP35398 SNORA67-201ENST00000384423 137 ntBASIC5.14□□□□□ -1.59
RORAP35398 GAPDHP15-201ENST00000398586 975 ntBASIC5.14□□□□□ -1.59
RORAP35398 RPL23AP27-201ENST00000415161 451 ntBASIC5.14□□□□□ -1.59
RORAP35398 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC5.14□□□□□ -1.59
RORAP35398 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC5.14□□□□□ -1.59
RORAP35398 GSTM5P1-201ENST00000434751 660 ntBASIC5.14□□□□□ -1.59
RORAP35398 MTND2P40-201ENST00000436718 841 ntBASIC5.14□□□□□ -1.59
RORAP35398 RPS23P9-201ENST00000448848 438 ntBASIC5.14□□□□□ -1.59
RORAP35398 AURKAPS1-201ENST00000451805 1212 ntBASIC5.14□□□□□ -1.59
RORAP35398 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC5.14□□□□□ -1.59
RORAP35398 RPL5P22-201ENST00000480199 884 ntBASIC5.14□□□□□ -1.59
RORAP35398 RPL7P6-201ENST00000480903 738 ntBASIC5.14□□□□□ -1.59
RORAP35398 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.14□□□□□ -1.59
RORAP35398 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.14□□□□□ -1.59
RORAP35398 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.14□□□□□ -1.59
RORAP35398 RNU6-941P-201ENST00000516346 108 ntBASIC5.14□□□□□ -1.59
RORAP35398 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RORAP35398 DPRXP4-201ENST00000578053 568 ntBASIC5.14□□□□□ -1.59
RORAP35398 AP005403.1-201ENST00000579720 229 ntBASIC5.14□□□□□ -1.59
RORAP35398 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.14□□□□□ -1.59
RORAP35398 AC008833.1-201ENST00000611633 691 ntBASIC5.14□□□□□ -1.59
RORAP35398 AL121612.2-201ENST00000612261 482 ntBASIC5.14□□□□□ -1.59
RORAP35398 AP001029.2-203ENST00000589795 4910 ntBASIC5.14□□□□□ -1.59
RORAP35398 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RORAP35398 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.14□□□□□ -1.59
RORAP35398 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.14□□□□□ -1.59
RORAP35398 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RORAP35398 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.14□□□□□ -1.59
RORAP35398 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RORAP35398 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RORAP35398 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RORAP35398 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.13□□□□□ -1.59
RORAP35398 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
RORAP35398 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.13□□□□□ -1.59
RORAP35398 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.13□□□□□ -1.59
RORAP35398 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.13□□□□□ -1.59
RORAP35398 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RORAP35398 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC5.13□□□□□ -1.59
RORAP35398 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
RORAP35398 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.13□□□□□ -1.59
RORAP35398 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RORAP35398 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RORAP35398 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.13□□□□□ -1.59
RORAP35398 RNA5SP507-201ENST00000363603 121 ntBASIC5.13□□□□□ -1.59
RORAP35398 RNA5SP487-201ENST00000410186 122 ntBASIC5.13□□□□□ -1.59
RORAP35398 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.13□□□□□ -1.59
RORAP35398 AC138761.5-201ENST00000433967 325 ntBASIC5.13□□□□□ -1.59
RORAP35398 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.13□□□□□ -1.59
RORAP35398 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.13□□□□□ -1.59
RORAP35398 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC5.13□□□□□ -1.59
RORAP35398 RPL15P21-201ENST00000495592 567 ntBASIC5.13□□□□□ -1.59
RORAP35398 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.13□□□□□ -1.59
RORAP35398 AC021106.1-201ENST00000509020 1058 ntBASIC5.13□□□□□ -1.59
RORAP35398 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms