Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 HNRNPA1P29-201ENST00000426409 879 ntBASIC8.1□□□□□ -1.11
CLIP1P30622 RPS27AP6-201ENST00000427962 448 ntBASIC8.1□□□□□ -1.11
CLIP1P30622 AL138878.2-201ENST00000440581 1241 ntBASIC8.1□□□□□ -1.11
CLIP1P30622 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC8.1□□□□□ -1.11
CLIP1P30622 GCSHP4-201ENST00000538792 439 ntBASIC8.1□□□□□ -1.11
CLIP1P30622 BNIP3P1-201ENST00000547295 580 ntBASIC8.1□□□□□ -1.11
CLIP1P30622 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC8.1□□□□□ -1.11
CLIP1P30622 MIR4737-201ENST00000583979 81 ntBASIC8.1□□□□□ -1.11
CLIP1P30622 AC087283.1-201ENST00000604029 1074 ntBASIC8.1□□□□□ -1.11
CLIP1P30622 AL022394.1-201ENST00000606979 292 ntBASIC8.1□□□□□ -1.11
CLIP1P30622 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
CLIP1P30622 AC078842.2-201ENST00000447529 1835 ntTSL 2 BASIC8.09□□□□□ -1.11
CLIP1P30622 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
CLIP1P30622 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC8.09□□□□□ -1.11
CLIP1P30622 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC8.09□□□□□ -1.11
CLIP1P30622 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
CLIP1P30622 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
CLIP1P30622 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
CLIP1P30622 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
CLIP1P30622 CHEK2P3-201ENST00000416118 248 ntBASIC8.09□□□□□ -1.11
CLIP1P30622 AL590399.4-201ENST00000436561 601 ntBASIC8.09□□□□□ -1.11
CLIP1P30622 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC8.09□□□□□ -1.11
CLIP1P30622 CEACAMP9-201ENST00000442990 513 ntBASIC8.09□□□□□ -1.11
CLIP1P30622 AC011753.3-201ENST00000443436 406 ntBASIC8.09□□□□□ -1.11
CLIP1P30622 AC140172.1-201ENST00000502928 141 ntBASIC8.09□□□□□ -1.11
CLIP1P30622 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC8.09□□□□□ -1.11
CLIP1P30622 AL512310.9-201ENST00000553311 948 ntBASIC8.09□□□□□ -1.11
CLIP1P30622 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC8.09□□□□□ -1.11
CLIP1P30622 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC8.09□□□□□ -1.11
CLIP1P30622 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC8.09□□□□□ -1.11
CLIP1P30622 MIR378J-201ENST00000611988 109 ntBASIC8.09□□□□□ -1.11
CLIP1P30622 IRF5P1-201ENST00000504852 2164 ntBASIC8.09□□□□□ -1.11
CLIP1P30622 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC8.09□□□□□ -1.11
CLIP1P30622 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC8.09□□□□□ -1.11
CLIP1P30622 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
CLIP1P30622 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
CLIP1P30622 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
CLIP1P30622 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
CLIP1P30622 IL22RA2-203ENST00000349184 2801 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CLIP1P30622 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC8.08□□□□□ -1.12
CLIP1P30622 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC8.08□□□□□ -1.12
CLIP1P30622 AC010132.2-201ENST00000295493 1043 ntBASIC8.08□□□□□ -1.12
CLIP1P30622 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
CLIP1P30622 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC8.08□□□□□ -1.12
CLIP1P30622 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC8.08□□□□□ -1.12
CLIP1P30622 ATP5HP3-201ENST00000396994 486 ntBASIC8.08□□□□□ -1.12
CLIP1P30622 AP002530.1-201ENST00000405705 684 ntBASIC8.08□□□□□ -1.12
CLIP1P30622 AC016397.1-201ENST00000412463 242 ntBASIC8.08□□□□□ -1.12
CLIP1P30622 MGAT2P2-201ENST00000427194 797 ntBASIC8.08□□□□□ -1.12
CLIP1P30622 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC8.08□□□□□ -1.12
CLIP1P30622 AC009220.1-201ENST00000451614 275 ntBASIC8.08□□□□□ -1.12
CLIP1P30622 RN7SL443P-201ENST00000464331 290 ntBASIC8.08□□□□□ -1.12
CLIP1P30622 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC8.08□□□□□ -1.12
CLIP1P30622 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC8.08□□□□□ -1.12
CLIP1P30622 AC019322.1-201ENST00000571869 389 ntBASIC8.08□□□□□ -1.12
CLIP1P30622 EIF1P5-201ENST00000585002 234 ntBASIC8.08□□□□□ -1.12
CLIP1P30622 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC8.08□□□□□ -1.12
CLIP1P30622 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC8.08□□□□□ -1.12
CLIP1P30622 AL031320.1-201ENST00000604177 357 ntBASIC8.08□□□□□ -1.12
CLIP1P30622 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC8.08□□□□□ -1.12
CLIP1P30622 AC105105.5-201ENST00000622635 1294 ntBASIC8.08□□□□□ -1.12
CLIP1P30622 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CLIP1P30622 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC8.08□□□□□ -1.12
CLIP1P30622 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC8.08□□□□□ -1.12
CLIP1P30622 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
CLIP1P30622 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC8.07□□□□□ -1.12
CLIP1P30622 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
CLIP1P30622 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC8.07□□□□□ -1.12
CLIP1P30622 AC008072.1-201ENST00000434254 824 ntBASIC8.07□□□□□ -1.12
CLIP1P30622 RPS17P2-201ENST00000461663 408 ntBASIC8.07□□□□□ -1.12
CLIP1P30622 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC8.07□□□□□ -1.12
CLIP1P30622 AC012339.2-201ENST00000523996 453 ntBASIC8.07□□□□□ -1.12
CLIP1P30622 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC8.07□□□□□ -1.12
CLIP1P30622 AC008033.2-201ENST00000542626 177 ntBASIC8.07□□□□□ -1.12
CLIP1P30622 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC8.07□□□□□ -1.12
CLIP1P30622 NMNAT1P1-201ENST00000554095 876 ntBASIC8.07□□□□□ -1.12
CLIP1P30622 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC8.07□□□□□ -1.12
CLIP1P30622 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC8.07□□□□□ -1.12
CLIP1P30622 AC040958.1-201ENST00000561102 201 ntBASIC8.07□□□□□ -1.12
CLIP1P30622 PRPF19P1-201ENST00000584766 898 ntBASIC8.07□□□□□ -1.12
CLIP1P30622 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC8.07□□□□□ -1.12
CLIP1P30622 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC8.07□□□□□ -1.12
CLIP1P30622 AC026367.3-201ENST00000619032 590 ntBASIC8.07□□□□□ -1.12
CLIP1P30622 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
CLIP1P30622 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
CLIP1P30622 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CLIP1P30622 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CLIP1P30622 AC132825.1-201ENST00000463573 2247 ntBASIC8.07□□□□□ -1.12
CLIP1P30622 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC8.06□□□□□ -1.12
CLIP1P30622 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC8.06□□□□□ -1.12
CLIP1P30622 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC8.06□□□□□ -1.12
CLIP1P30622 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CLIP1P30622 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
CLIP1P30622 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC8.06□□□□□ -1.12
CLIP1P30622 FABP12P1-201ENST00000401911 322 ntBASIC8.06□□□□□ -1.12
CLIP1P30622 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
CLIP1P30622 RPS4XP9-201ENST00000405151 780 ntBASIC8.06□□□□□ -1.12
CLIP1P30622 RAB28P1-201ENST00000411517 641 ntBASIC8.06□□□□□ -1.12
CLIP1P30622 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC8.06□□□□□ -1.12
CLIP1P30622 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC8.06□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 123.3 ms