Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
SHC1P29353 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SHC1P29353 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
SHC1P29353 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC4.87□□□□□ -1.63
SHC1P29353 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SHC1P29353 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.87□□□□□ -1.63
SHC1P29353 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC4.87□□□□□ -1.63
SHC1P29353 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
SHC1P29353 OR1L6-202ENST00000373684 1044 ntBASIC4.87□□□□□ -1.63
SHC1P29353 AC009804.1-201ENST00000400949 179 ntBASIC4.87□□□□□ -1.63
SHC1P29353 RNU6ATAC18P-201ENST00000408413 101 ntBASIC4.87□□□□□ -1.63
SHC1P29353 RN7SKP229-201ENST00000410465 302 ntBASIC4.87□□□□□ -1.63
SHC1P29353 NPM1P4-201ENST00000414095 812 ntBASIC4.87□□□□□ -1.63
SHC1P29353 GNG5P5-201ENST00000420444 220 ntBASIC4.87□□□□□ -1.63
SHC1P29353 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.87□□□□□ -1.63
SHC1P29353 RPL7AP49-201ENST00000429522 581 ntBASIC4.87□□□□□ -1.63
SHC1P29353 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC4.87□□□□□ -1.63
SHC1P29353 AL591438.1-201ENST00000433508 581 ntBASIC4.87□□□□□ -1.63
SHC1P29353 AC090804.1-201ENST00000448870 490 ntBASIC4.87□□□□□ -1.63
SHC1P29353 RPL7P45-201ENST00000455851 743 ntBASIC4.87□□□□□ -1.63
SHC1P29353 AC011225.1-201ENST00000457751 369 ntBASIC4.87□□□□□ -1.63
SHC1P29353 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
SHC1P29353 RPS4XP1-201ENST00000482189 787 ntBASIC4.87□□□□□ -1.63
SHC1P29353 IGBP1P4-201ENST00000503202 879 ntBASIC4.87□□□□□ -1.63
SHC1P29353 ENPP7P11-201ENST00000505915 627 ntBASIC4.87□□□□□ -1.63
SHC1P29353 AC016559.2-201ENST00000510759 359 ntBASIC4.87□□□□□ -1.63
SHC1P29353 SCARNA20.4-201ENST00000516969 131 ntBASIC4.87□□□□□ -1.63
SHC1P29353 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
SHC1P29353 IGKV2-18-201ENST00000522607 343 ntBASIC4.87□□□□□ -1.63
SHC1P29353 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC4.87□□□□□ -1.63
SHC1P29353 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC4.87□□□□□ -1.63
SHC1P29353 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC4.87□□□□□ -1.63
SHC1P29353 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC4.87□□□□□ -1.63
SHC1P29353 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC4.87□□□□□ -1.63
SHC1P29353 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC4.87□□□□□ -1.63
SHC1P29353 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC4.87□□□□□ -1.63
SHC1P29353 FKBP1AP1-201ENST00000594588 318 ntBASIC4.87□□□□□ -1.63
SHC1P29353 BX322635.1-201ENST00000605804 496 ntBASIC4.87□□□□□ -1.63
SHC1P29353 AC144521.1-201ENST00000607148 956 ntBASIC4.87□□□□□ -1.63
SHC1P29353 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC4.87□□□□□ -1.63
SHC1P29353 AP000864.1-201ENST00000609424 650 ntBASIC4.87□□□□□ -1.63
SHC1P29353 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC4.87□□□□□ -1.63
SHC1P29353 AP000240.1-201ENST00000609910 452 ntBASIC4.87□□□□□ -1.63
SHC1P29353 AL512624.1-201ENST00000613638 469 ntBASIC4.87□□□□□ -1.63
SHC1P29353 AC109583.2-201ENST00000617367 129 ntBASIC4.87□□□□□ -1.63
SHC1P29353 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
SHC1P29353 AC091932.2-201ENST00000623014 291 ntBASIC4.87□□□□□ -1.63
SHC1P29353 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC4.87□□□□□ -1.63
SHC1P29353 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SHC1P29353 AC022417.1-201ENST00000624768 1303 ntBASIC4.87□□□□□ -1.63
SHC1P29353 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
SHC1P29353 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SHC1P29353 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC4.87□□□□□ -1.63
SHC1P29353 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SHC1P29353 AC116158.1-201ENST00000560231 2129 ntBASIC4.87□□□□□ -1.63
SHC1P29353 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC4.87□□□□□ -1.63
SHC1P29353 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
SHC1P29353 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC4.87□□□□□ -1.63
SHC1P29353 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
SHC1P29353 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC4.86□□□□□ -1.63
SHC1P29353 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
SHC1P29353 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SHC1P29353 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SHC1P29353 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
SHC1P29353 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SHC1P29353 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
SHC1P29353 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
SHC1P29353 OR9K1P-201ENST00000326513 941 ntBASIC4.86□□□□□ -1.63
SHC1P29353 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
SHC1P29353 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
SHC1P29353 DBIP1-201ENST00000401435 260 ntBASIC4.86□□□□□ -1.63
SHC1P29353 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SHC1P29353 HMGB1P32-201ENST00000425971 565 ntBASIC4.86□□□□□ -1.63
SHC1P29353 SDR42E1P3-201ENST00000438345 502 ntBASIC4.86□□□□□ -1.63
SHC1P29353 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC4.86□□□□□ -1.63
SHC1P29353 NDUFA5P8-201ENST00000449019 346 ntBASIC4.86□□□□□ -1.63
SHC1P29353 AL672138.1-201ENST00000450604 1015 ntBASIC4.86□□□□□ -1.63
SHC1P29353 FCF1P7-201ENST00000451185 558 ntBASIC4.86□□□□□ -1.63
SHC1P29353 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC4.86□□□□□ -1.63
SHC1P29353 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
SHC1P29353 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC4.86□□□□□ -1.63
SHC1P29353 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC4.86□□□□□ -1.63
SHC1P29353 AC092754.1-201ENST00000472975 479 ntBASIC4.86□□□□□ -1.63
SHC1P29353 AL049874.2-201ENST00000492636 288 ntBASIC4.86□□□□□ -1.63
SHC1P29353 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC4.86□□□□□ -1.63
SHC1P29353 HMGB1P44-201ENST00000508597 572 ntBASIC4.86□□□□□ -1.63
SHC1P29353 AC147055.1-201ENST00000509261 750 ntBASIC4.86□□□□□ -1.63
SHC1P29353 HMGN1P9-201ENST00000515212 298 ntBASIC4.86□□□□□ -1.63
SHC1P29353 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC4.86□□□□□ -1.63
SHC1P29353 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SHC1P29353 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SHC1P29353 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC4.86□□□□□ -1.63
SHC1P29353 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC4.86□□□□□ -1.63
SHC1P29353 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC4.86□□□□□ -1.63
SHC1P29353 AC127024.5-201ENST00000580085 462 ntBASIC4.86□□□□□ -1.63
SHC1P29353 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SHC1P29353 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC4.86□□□□□ -1.63
SHC1P29353 uc_338.7-201ENST00000621834 124 ntBASIC4.86□□□□□ -1.63
SHC1P29353 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC4.86□□□□□ -1.63
SHC1P29353 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms