Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC7.81□□□□□ -1.16
RXRBP28702 AL020997.2-201ENST00000602607 184 ntBASIC7.81□□□□□ -1.16
RXRBP28702 TAS2R6P-201ENST00000605022 826 ntBASIC7.81□□□□□ -1.16
RXRBP28702 AC016727.1-205ENST00000605437 569 ntBASIC7.81□□□□□ -1.16
RXRBP28702 AP002802.2-201ENST00000605877 235 ntBASIC7.81□□□□□ -1.16
RXRBP28702 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC7.81□□□□□ -1.16
RXRBP28702 AC083809.1-201ENST00000615051 472 ntBASIC7.81□□□□□ -1.16
RXRBP28702 AC132068.1-201ENST00000623805 459 ntBASIC7.81□□□□□ -1.16
RXRBP28702 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC7.81□□□□□ -1.16
RXRBP28702 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
RXRBP28702 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC7.81□□□□□ -1.16
RXRBP28702 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
RXRBP28702 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC7.81□□□□□ -1.16
RXRBP28702 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
RXRBP28702 ZNF718-201ENST00000510175 3495 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
RXRBP28702 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
RXRBP28702 ALB-220ENST00000621628 1606 ntTSL 5 BASIC7.81□□□□□ -1.16
RXRBP28702 UGT2B4-201ENST00000305107 2103 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
RXRBP28702 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC7.81□□□□□ -1.16
RXRBP28702 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
RXRBP28702 AL161912.4-201ENST00000623889 2468 ntBASIC7.8□□□□□ -1.16
RXRBP28702 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC7.8□□□□□ -1.16
RXRBP28702 SYNPO2-202ENST00000429713 9920 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
RXRBP28702 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
RXRBP28702 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC7.8□□□□□ -1.16
RXRBP28702 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
RXRBP28702 AKR1C2-201ENST00000380753 3756 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
RXRBP28702 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
RXRBP28702 COL6A4P1-202ENST00000487147 4317 ntBASIC7.8□□□□□ -1.16
RXRBP28702 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
RXRBP28702 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
RXRBP28702 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
RXRBP28702 SNORD115-48-201ENST00000364764 76 ntBASIC7.8□□□□□ -1.16
RXRBP28702 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC7.8□□□□□ -1.16
RXRBP28702 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
RXRBP28702 RN7SKP166-201ENST00000410812 305 ntBASIC7.8□□□□□ -1.16
RXRBP28702 RNU4-27P-201ENST00000410889 139 ntBASIC7.8□□□□□ -1.16
RXRBP28702 RAB9AP4-201ENST00000415230 609 ntBASIC7.8□□□□□ -1.16
RXRBP28702 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC7.8□□□□□ -1.16
RXRBP28702 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
RXRBP28702 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC7.8□□□□□ -1.16
RXRBP28702 OSTCP5-201ENST00000425293 453 ntBASIC7.8□□□□□ -1.16
RXRBP28702 FO393414.1-201ENST00000428697 1184 ntBASIC7.8□□□□□ -1.16
RXRBP28702 ZNF965P-201ENST00000432501 817 ntBASIC7.8□□□□□ -1.16
RXRBP28702 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC7.8□□□□□ -1.16
RXRBP28702 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC7.8□□□□□ -1.16
RXRBP28702 RPS3AP43-201ENST00000479743 781 ntBASIC7.8□□□□□ -1.16
RXRBP28702 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC7.8□□□□□ -1.16
RXRBP28702 IGBP1P5-201ENST00000507524 1000 ntBASIC7.8□□□□□ -1.16
RXRBP28702 AC116353.3-201ENST00000511215 249 ntBASIC7.8□□□□□ -1.16
RXRBP28702 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC7.8□□□□□ -1.16
RXRBP28702 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC7.8□□□□□ -1.16
RXRBP28702 PTTG3P-201ENST00000521862 606 ntBASIC7.8□□□□□ -1.16
RXRBP28702 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC7.8□□□□□ -1.16
RXRBP28702 AC023050.2-201ENST00000544968 387 ntBASIC7.8□□□□□ -1.16
RXRBP28702 AC126177.5-201ENST00000549599 178 ntBASIC7.8□□□□□ -1.16
RXRBP28702 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
RXRBP28702 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
RXRBP28702 MTND4P33-201ENST00000556706 766 ntBASIC7.8□□□□□ -1.16
RXRBP28702 AC103968.1-201ENST00000557841 573 ntBASIC7.8□□□□□ -1.16
RXRBP28702 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC7.8□□□□□ -1.16
RXRBP28702 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC7.8□□□□□ -1.16
RXRBP28702 AC068135.2-201ENST00000569293 1028 ntBASIC7.8□□□□□ -1.16
RXRBP28702 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC7.8□□□□□ -1.16
RXRBP28702 AL031775.1-201ENST00000607014 887 ntBASIC7.8□□□□□ -1.16
RXRBP28702 AC068944.2-201ENST00000610373 403 ntBASIC7.8□□□□□ -1.16
RXRBP28702 AC025016.1-201ENST00000616746 682 ntBASIC7.8□□□□□ -1.16
RXRBP28702 OR1N1-202ENST00000619659 939 ntBASIC7.8□□□□□ -1.16
RXRBP28702 AC034229.6-201ENST00000623704 224 ntBASIC7.8□□□□□ -1.16
RXRBP28702 AL353662.3-201ENST00000625131 237 ntBASIC7.8□□□□□ -1.16
RXRBP28702 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC7.8□□□□□ -1.16
RXRBP28702 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC7.8□□□□□ -1.16
RXRBP28702 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
RXRBP28702 AC010624.4-201ENST00000597606 1351 ntBASIC7.8□□□□□ -1.16
RXRBP28702 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC7.8□□□□□ -1.16
RXRBP28702 CASC19-255ENST00000641733 1385 ntBASIC7.8□□□□□ -1.16
RXRBP28702 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
RXRBP28702 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC7.8□□□□□ -1.16
RXRBP28702 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC7.8□□□□□ -1.16
RXRBP28702 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC7.8□□□□□ -1.16
RXRBP28702 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC7.8□□□□□ -1.16
RXRBP28702 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC7.8□□□□□ -1.16
RXRBP28702 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC7.8□□□□□ -1.16
RXRBP28702 SLC36A4-206ENST00000529184 1917 ntTSL 2 BASIC7.8□□□□□ -1.16
RXRBP28702 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC7.79□□□□□ -1.16
RXRBP28702 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
RXRBP28702 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
RXRBP28702 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
RXRBP28702 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
RXRBP28702 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
RXRBP28702 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
RXRBP28702 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
RXRBP28702 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
RXRBP28702 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC7.79□□□□□ -1.16
RXRBP28702 OR11H13P-201ENST00000359695 979 ntBASIC7.79□□□□□ -1.16
RXRBP28702 RNU6-618P-201ENST00000363518 112 ntBASIC7.79□□□□□ -1.16
RXRBP28702 RNA5SP131-201ENST00000365452 119 ntBASIC7.79□□□□□ -1.16
RXRBP28702 RNU6-354P-201ENST00000383862 107 ntBASIC7.79□□□□□ -1.16
RXRBP28702 RNU6-610P-201ENST00000384264 107 ntBASIC7.79□□□□□ -1.16
RXRBP28702 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC7.79□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms