Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC4.04□□□□□ -1.76
HLA-DMBP28068 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC4.04□□□□□ -1.76
HLA-DMBP28068 AL390726.5-202ENST00000564800 256 ntBASIC4.04□□□□□ -1.76
HLA-DMBP28068 AC106730.2-201ENST00000566641 540 ntBASIC4.04□□□□□ -1.76
HLA-DMBP28068 MTCYBP13-201ENST00000578634 1093 ntBASIC4.04□□□□□ -1.76
HLA-DMBP28068 MIR4489-201ENST00000578869 62 ntBASIC4.04□□□□□ -1.76
HLA-DMBP28068 MIR1273E-201ENST00000581165 102 ntBASIC4.04□□□□□ -1.76
HLA-DMBP28068 MIR3936-201ENST00000584304 110 ntBASIC4.04□□□□□ -1.76
HLA-DMBP28068 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC4.04□□□□□ -1.76
HLA-DMBP28068 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC4.04□□□□□ -1.76
HLA-DMBP28068 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC4.04□□□□□ -1.76
HLA-DMBP28068 CDC42EP3P1-201ENST00000601004 764 ntBASIC4.04□□□□□ -1.76
HLA-DMBP28068 AL356608.1-201ENST00000610034 820 ntBASIC4.04□□□□□ -1.76
HLA-DMBP28068 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC4.04□□□□□ -1.76
HLA-DMBP28068 AC132068.1-201ENST00000623805 459 ntBASIC4.04□□□□□ -1.76
HLA-DMBP28068 AP003400.3-201ENST00000624904 346 ntBASIC4.04□□□□□ -1.76
HLA-DMBP28068 TMEM30CP-203ENST00000637814 1035 ntBASIC4.04□□□□□ -1.76
HLA-DMBP28068 SAMMSON-227ENST00000642114 1199 ntBASIC4.04□□□□□ -1.76
HLA-DMBP28068 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.04□□□□□ -1.76
HLA-DMBP28068 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
HLA-DMBP28068 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
HLA-DMBP28068 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
HLA-DMBP28068 MTCO1P46-201ENST00000451639 1491 ntBASIC4.04□□□□□ -1.76
HLA-DMBP28068 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
HLA-DMBP28068 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC4.04□□□□□ -1.76
HLA-DMBP28068 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.04□□□□□ -1.76
HLA-DMBP28068 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
HLA-DMBP28068 CD86-204ENST00000469710 1604 ntTSL 2 BASIC4.03□□□□□ -1.76
HLA-DMBP28068 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
HLA-DMBP28068 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
HLA-DMBP28068 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.03□□□□□ -1.76
HLA-DMBP28068 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.03□□□□□ -1.76
HLA-DMBP28068 AC004817.4-201ENST00000602396 3625 ntBASIC4.03□□□□□ -1.76
HLA-DMBP28068 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
HLA-DMBP28068 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
HLA-DMBP28068 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
HLA-DMBP28068 OR9K1P-201ENST00000326513 941 ntBASIC4.03□□□□□ -1.76
HLA-DMBP28068 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC4.03□□□□□ -1.76
HLA-DMBP28068 RNA5SP319-201ENST00000362768 119 ntBASIC4.03□□□□□ -1.76
HLA-DMBP28068 TANK-203ENST00000402568 878 ntTSL 5 BASIC4.03□□□□□ -1.76
HLA-DMBP28068 AL133388.1-201ENST00000404509 287 ntBASIC4.03□□□□□ -1.76
HLA-DMBP28068 RN7SKP97-201ENST00000410966 333 ntBASIC4.03□□□□□ -1.76
HLA-DMBP28068 CTSL3P-202ENST00000412179 788 ntBASIC4.03□□□□□ -1.76
HLA-DMBP28068 Z68694.1-201ENST00000413929 841 ntBASIC4.03□□□□□ -1.76
HLA-DMBP28068 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC4.03□□□□□ -1.76
HLA-DMBP28068 SRSF1P1-201ENST00000424058 520 ntBASIC4.03□□□□□ -1.76
HLA-DMBP28068 HSPD1P12-201ENST00000429127 1069 ntBASIC4.03□□□□□ -1.76
HLA-DMBP28068 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC4.03□□□□□ -1.76
HLA-DMBP28068 AC016772.1-201ENST00000444170 1261 ntBASIC4.03□□□□□ -1.76
HLA-DMBP28068 NOP56P2-201ENST00000447491 769 ntBASIC4.03□□□□□ -1.76
HLA-DMBP28068 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC4.03□□□□□ -1.76
HLA-DMBP28068 PRPF38AP1-201ENST00000451976 933 ntBASIC4.03□□□□□ -1.76
HLA-DMBP28068 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC4.03□□□□□ -1.76
HLA-DMBP28068 AC110749.1-201ENST00000462007 357 ntBASIC4.03□□□□□ -1.76
HLA-DMBP28068 AL133445.1-201ENST00000467051 452 ntBASIC4.03□□□□□ -1.76
HLA-DMBP28068 SIAH1P1-201ENST00000479411 923 ntBASIC4.03□□□□□ -1.76
HLA-DMBP28068 RPL7P41-201ENST00000485823 957 ntBASIC4.03□□□□□ -1.76
HLA-DMBP28068 AL049874.2-201ENST00000492636 288 ntBASIC4.03□□□□□ -1.76
HLA-DMBP28068 AC093890.1-201ENST00000502554 540 ntBASIC4.03□□□□□ -1.76
HLA-DMBP28068 MYL12BP2-201ENST00000503948 512 ntBASIC4.03□□□□□ -1.76
HLA-DMBP28068 AC016559.2-201ENST00000510759 359 ntBASIC4.03□□□□□ -1.76
HLA-DMBP28068 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC4.03□□□□□ -1.76
HLA-DMBP28068 EIF3KP3-201ENST00000514461 639 ntBASIC4.03□□□□□ -1.76
HLA-DMBP28068 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC4.03□□□□□ -1.76
HLA-DMBP28068 CASC19-203ENST00000523510 575 ntTSL 3 BASIC4.03□□□□□ -1.76
HLA-DMBP28068 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.03□□□□□ -1.76
HLA-DMBP28068 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
HLA-DMBP28068 AC078878.1-201ENST00000539832 958 ntBASIC4.03□□□□□ -1.76
HLA-DMBP28068 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC4.03□□□□□ -1.76
HLA-DMBP28068 SMARCE1P3-201ENST00000553649 1231 ntBASIC4.03□□□□□ -1.76
HLA-DMBP28068 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC4.03□□□□□ -1.76
HLA-DMBP28068 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
HLA-DMBP28068 CLMN-206ENST00000556441 452 ntTSL 5 BASIC4.03□□□□□ -1.76
HLA-DMBP28068 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC4.03□□□□□ -1.76
HLA-DMBP28068 AC015720.2-201ENST00000567709 334 ntBASIC4.03□□□□□ -1.76
HLA-DMBP28068 AC233702.9-201ENST00000581528 203 ntBASIC4.03□□□□□ -1.76
HLA-DMBP28068 MIR3176-201ENST00000582210 90 ntBASIC4.03□□□□□ -1.76
HLA-DMBP28068 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC4.03□□□□□ -1.76
HLA-DMBP28068 AL512624.1-201ENST00000613638 469 ntBASIC4.03□□□□□ -1.76
HLA-DMBP28068 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC4.03□□□□□ -1.76
HLA-DMBP28068 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
HLA-DMBP28068 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
HLA-DMBP28068 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HLA-DMBP28068 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.03□□□□□ -1.76
HLA-DMBP28068 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
HLA-DMBP28068 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
HLA-DMBP28068 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
HLA-DMBP28068 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
HLA-DMBP28068 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC4.03□□□□□ -1.76
HLA-DMBP28068 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC4.03□□□□□ -1.76
HLA-DMBP28068 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC4.03□□□□□ -1.76
HLA-DMBP28068 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC4.03□□□□□ -1.77
HLA-DMBP28068 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.77
HLA-DMBP28068 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HLA-DMBP28068 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
HLA-DMBP28068 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HLA-DMBP28068 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
HLA-DMBP28068 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HLA-DMBP28068 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
HLA-DMBP28068 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms