Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.15□□□□□ -1.59
HOXC4P09017 AC009852.2-201ENST00000567898 485 ntBASIC5.15□□□□□ -1.59
HOXC4P09017 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC5.15□□□□□ -1.59
HOXC4P09017 AC007786.3-201ENST00000615154 596 ntBASIC5.15□□□□□ -1.59
HOXC4P09017 AF117829.2-201ENST00000619538 361 ntBASIC5.15□□□□□ -1.59
HOXC4P09017 AC003973.3-201ENST00000624863 2822 ntBASIC5.15□□□□□ -1.59
HOXC4P09017 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
HOXC4P09017 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
HOXC4P09017 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.15□□□□□ -1.59
HOXC4P09017 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.15□□□□□ -1.59
HOXC4P09017 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
HOXC4P09017 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
HOXC4P09017 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.15□□□□□ -1.59
HOXC4P09017 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.15□□□□□ -1.59
HOXC4P09017 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.15□□□□□ -1.59
HOXC4P09017 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
HOXC4P09017 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
HOXC4P09017 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
HOXC4P09017 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
HOXC4P09017 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
HOXC4P09017 AC004656.1-201ENST00000568479 4951 ntBASIC5.14□□□□□ -1.59
HOXC4P09017 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HOXC4P09017 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.14□□□□□ -1.59
HOXC4P09017 AC023421.1-201ENST00000590535 1785 ntBASIC5.14□□□□□ -1.59
HOXC4P09017 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
HOXC4P09017 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HOXC4P09017 AC112255.1-201ENST00000624070 2493 ntBASIC5.14□□□□□ -1.59
HOXC4P09017 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
HOXC4P09017 SNURFL-201ENST00000309296 343 ntBASIC5.14□□□□□ -1.59
HOXC4P09017 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HOXC4P09017 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
HOXC4P09017 AL133270.1-201ENST00000402635 279 ntBASIC5.14□□□□□ -1.59
HOXC4P09017 RN7SKP125-201ENST00000410481 302 ntBASIC5.14□□□□□ -1.59
HOXC4P09017 AC093162.1-201ENST00000419682 124 ntBASIC5.14□□□□□ -1.59
HOXC4P09017 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.14□□□□□ -1.59
HOXC4P09017 RPL7P41-201ENST00000485823 957 ntBASIC5.14□□□□□ -1.59
HOXC4P09017 AC093270.2-201ENST00000486157 792 ntBASIC5.14□□□□□ -1.59
HOXC4P09017 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.14□□□□□ -1.59
HOXC4P09017 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.14□□□□□ -1.59
HOXC4P09017 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.14□□□□□ -1.59
HOXC4P09017 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC5.14□□□□□ -1.59
HOXC4P09017 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC5.14□□□□□ -1.59
HOXC4P09017 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HOXC4P09017 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.14□□□□□ -1.59
HOXC4P09017 AC107993.1-201ENST00000591343 684 ntBASIC5.14□□□□□ -1.59
HOXC4P09017 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.14□□□□□ -1.59
HOXC4P09017 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.14□□□□□ -1.59
HOXC4P09017 AC010632.3-201ENST00000611377 369 ntBASIC5.14□□□□□ -1.59
HOXC4P09017 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.14□□□□□ -1.59
HOXC4P09017 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.14□□□□□ -1.59
HOXC4P09017 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.14□□□□□ -1.59
HOXC4P09017 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HOXC4P09017 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
HOXC4P09017 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.14□□□□□ -1.59
HOXC4P09017 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HOXC4P09017 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HOXC4P09017 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HOXC4P09017 OR5AQ1P-202ENST00000641257 1534 ntBASIC5.13□□□□□ -1.59
HOXC4P09017 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
HOXC4P09017 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
HOXC4P09017 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HOXC4P09017 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.13□□□□□ -1.59
HOXC4P09017 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HOXC4P09017 AL589647.1-201ENST00000402485 466 ntBASIC5.13□□□□□ -1.59
HOXC4P09017 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.13□□□□□ -1.59
HOXC4P09017 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5.13□□□□□ -1.59
HOXC4P09017 RANP7-201ENST00000418085 644 ntBASIC5.13□□□□□ -1.59
HOXC4P09017 AC009784.1-201ENST00000426484 460 ntBASIC5.13□□□□□ -1.59
HOXC4P09017 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.13□□□□□ -1.59
HOXC4P09017 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.13□□□□□ -1.59
HOXC4P09017 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.13□□□□□ -1.59
HOXC4P09017 NOP56P2-201ENST00000447491 769 ntBASIC5.13□□□□□ -1.59
HOXC4P09017 AC090804.1-201ENST00000448870 490 ntBASIC5.13□□□□□ -1.59
HOXC4P09017 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC5.13□□□□□ -1.59
HOXC4P09017 RN7SL189P-201ENST00000468631 289 ntBASIC5.13□□□□□ -1.59
HOXC4P09017 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.13□□□□□ -1.59
HOXC4P09017 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
HOXC4P09017 RN7SKP260-201ENST00000516907 149 ntBASIC5.13□□□□□ -1.59
HOXC4P09017 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.13□□□□□ -1.59
HOXC4P09017 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HOXC4P09017 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HOXC4P09017 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.13□□□□□ -1.59
HOXC4P09017 AC010503.3-201ENST00000594355 540 ntBASIC5.13□□□□□ -1.59
HOXC4P09017 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.13□□□□□ -1.59
HOXC4P09017 AC008536.1-201ENST00000602872 669 ntBASIC5.13□□□□□ -1.59
HOXC4P09017 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.13□□□□□ -1.59
HOXC4P09017 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.13□□□□□ -1.59
HOXC4P09017 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.13□□□□□ -1.59
HOXC4P09017 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HOXC4P09017 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
HOXC4P09017 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HOXC4P09017 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
HOXC4P09017 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HOXC4P09017 CASC19-281ENST00000642118 1554 ntBASIC5.12□□□□□ -1.59
HOXC4P09017 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.12□□□□□ -1.59
HOXC4P09017 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HOXC4P09017 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.12□□□□□ -1.59
HOXC4P09017 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
HOXC4P09017 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.12□□□□□ -1.59
HOXC4P09017 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 131.4 ms