Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 OR5AQ1P-201ENST00000527596 927 ntBASIC6.84□□□□□ -1.31
PDGFAP04085 AC009869.1-201ENST00000530418 528 ntTSL 4 BASIC6.84□□□□□ -1.31
PDGFAP04085 ZNF585B-204ENST00000531805 2971 ntTSL 2 BASIC6.84□□□□□ -1.31
PDGFAP04085 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC6.84□□□□□ -1.31
PDGFAP04085 AC021979.2-201ENST00000553644 209 ntTSL 5 BASIC6.84□□□□□ -1.31
PDGFAP04085 TEX46-202ENST00000566855 510 ntAPPRIS P2 TSL 2 BASIC6.84□□□□□ -1.31
PDGFAP04085 AC090751.1-201ENST00000566966 267 ntBASIC6.84□□□□□ -1.31
PDGFAP04085 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC6.84□□□□□ -1.31
PDGFAP04085 AC074135.1-202ENST00000600223 563 ntTSL 3 BASIC6.84□□□□□ -1.31
PDGFAP04085 DUXAP4-201ENST00000603046 613 ntBASIC6.84□□□□□ -1.31
PDGFAP04085 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC6.84□□□□□ -1.31
PDGFAP04085 PRELID3BP8-201ENST00000604148 295 ntBASIC6.84□□□□□ -1.31
PDGFAP04085 IGKV2OR2-7-201ENST00000604652 304 ntBASIC6.84□□□□□ -1.31
PDGFAP04085 AC092960.1-201ENST00000604762 351 ntBASIC6.84□□□□□ -1.31
PDGFAP04085 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC6.84□□□□□ -1.31
PDGFAP04085 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC6.84□□□□□ -1.31
PDGFAP04085 AC092681.3-201ENST00000609463 678 ntBASIC6.84□□□□□ -1.31
PDGFAP04085 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC6.84□□□□□ -1.31
PDGFAP04085 MIR6780B-201ENST00000610307 79 ntBASIC6.84□□□□□ -1.31
PDGFAP04085 AC135068.11-201ENST00000636378 921 ntBASIC6.84□□□□□ -1.31
PDGFAP04085 JAML-213ENST00000640745 951 ntTSL 5 BASIC6.84□□□□□ -1.31
PDGFAP04085 MAPK10-365ENST00000641902 3825 ntBASIC6.84□□□□□ -1.31
PDGFAP04085 NBPF19-206ENST00000621744 14425 ntTSL 5 BASIC6.84□□□□□ -1.31
PDGFAP04085 CEACAM5-203ENST00000405816 2354 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
PDGFAP04085 CCDC162P-202ENST00000368966 6751 ntBASIC6.84□□□□□ -1.31
PDGFAP04085 RIPOR2-206ENST00000538035 5389 ntTSL 2 BASIC6.84□□□□□ -1.31
PDGFAP04085 RNF6P1-201ENST00000444889 1784 ntBASIC6.84□□□□□ -1.31
PDGFAP04085 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
PDGFAP04085 ADAMTS3-204ENST00000622135 4479 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.31
PDGFAP04085 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC6.84□□□□□ -1.31
PDGFAP04085 LINC00561-201ENST00000565815 2738 ntBASIC6.84□□□□□ -1.32
PDGFAP04085 FBXO3-209ENST00000531080 1448 ntTSL 2 BASIC6.84□□□□□ -1.32
PDGFAP04085 AC020904.2-202ENST00000614660 1401 ntBASIC6.84□□□□□ -1.32
PDGFAP04085 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC6.84□□□□□ -1.32
PDGFAP04085 HABP2-203ENST00000542051 2972 ntAPPRIS ALT2 TSL 2 BASIC6.84□□□□□ -1.32
PDGFAP04085 FAF2-201ENST00000261942 4515 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
PDGFAP04085 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
PDGFAP04085 PTPN14-201ENST00000366956 12985 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
PDGFAP04085 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC6.83□□□□□ -1.32
PDGFAP04085 AL133243.4-201ENST00000623116 3109 ntBASIC6.83□□□□□ -1.32
PDGFAP04085 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
PDGFAP04085 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC6.83□□□□□ -1.32
PDGFAP04085 PARP9-202ENST00000462315 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
PDGFAP04085 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC6.83□□□□□ -1.32
PDGFAP04085 AL034370.1-201ENST00000397254 1590 ntBASIC6.83□□□□□ -1.32
PDGFAP04085 MTCO1P14-201ENST00000441695 1559 ntBASIC6.83□□□□□ -1.32
PDGFAP04085 RND3-202ENST00000375734 2777 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
PDGFAP04085 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
PDGFAP04085 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
PDGFAP04085 AL671511.1-201ENST00000425033 3458 ntTSL 2 BASIC6.83□□□□□ -1.32
PDGFAP04085 FAM47E-202ENST00000502320 6249 ntAPPRIS ALT2 TSL 2 BASIC6.83□□□□□ -1.32
PDGFAP04085 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
PDGFAP04085 CCL16-205ENST00000611905 1506 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
PDGFAP04085 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
PDGFAP04085 GNG3-201ENST00000294117 882 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
PDGFAP04085 CBX3P1-201ENST00000325243 554 ntBASIC6.83□□□□□ -1.32
PDGFAP04085 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
PDGFAP04085 RNU4-76P-201ENST00000364509 141 ntBASIC6.83□□□□□ -1.32
PDGFAP04085 MUC1-206ENST00000368390 804 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
PDGFAP04085 MUC1-209ENST00000368396 516 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
PDGFAP04085 MUC1-210ENST00000368398 729 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
PDGFAP04085 CARD17-201ENST00000375707 466 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
PDGFAP04085 Y_RNA.402-201ENST00000383972 102 ntBASIC6.83□□□□□ -1.32
PDGFAP04085 TRBV19-201ENST00000390393 552 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
PDGFAP04085 MTCO3P40-201ENST00000392516 676 ntBASIC6.83□□□□□ -1.32
PDGFAP04085 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC6.83□□□□□ -1.32
PDGFAP04085 ARSFP1-201ENST00000398758 477 ntBASIC6.83□□□□□ -1.32
PDGFAP04085 RSPH14-202ENST00000406876 519 ntTSL 3 BASIC6.83□□□□□ -1.32
PDGFAP04085 RPSAP72-201ENST00000407020 358 ntBASIC6.83□□□□□ -1.32
PDGFAP04085 RNU2-18P-201ENST00000411224 162 ntBASIC6.83□□□□□ -1.32
PDGFAP04085 SPRY4-AS1-201ENST00000414314 521 ntTSL 3 BASIC6.83□□□□□ -1.32
PDGFAP04085 AL691515.2-201ENST00000414765 466 ntTSL 3 BASIC6.83□□□□□ -1.32
PDGFAP04085 AC009413.1-201ENST00000414823 399 ntBASIC6.83□□□□□ -1.32
PDGFAP04085 VDAC1P10-201ENST00000416715 891 ntBASIC6.83□□□□□ -1.32
PDGFAP04085 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC6.83□□□□□ -1.32
PDGFAP04085 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC6.83□□□□□ -1.32
PDGFAP04085 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
PDGFAP04085 AL353754.1-201ENST00000440219 340 ntBASIC6.83□□□□□ -1.32
PDGFAP04085 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC6.83□□□□□ -1.32
PDGFAP04085 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC6.83□□□□□ -1.32
PDGFAP04085 DPPA3P1-201ENST00000448050 469 ntBASIC6.83□□□□□ -1.32
PDGFAP04085 SLC31A1P1-201ENST00000451221 567 ntBASIC6.83□□□□□ -1.32
PDGFAP04085 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC6.83□□□□□ -1.32
PDGFAP04085 AC092001.1-201ENST00000453012 261 ntBASIC6.83□□□□□ -1.32
PDGFAP04085 MTND1P11-201ENST00000456661 876 ntBASIC6.83□□□□□ -1.32
PDGFAP04085 UBDP1-202ENST00000457888 382 ntBASIC6.83□□□□□ -1.32
PDGFAP04085 AC091564.1-201ENST00000464563 479 ntBASIC6.83□□□□□ -1.32
PDGFAP04085 AP000852.1-201ENST00000472460 573 ntBASIC6.83□□□□□ -1.32
PDGFAP04085 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC6.83□□□□□ -1.32
PDGFAP04085 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC6.83□□□□□ -1.32
PDGFAP04085 AC233724.1-201ENST00000503894 233 ntBASIC6.83□□□□□ -1.32
PDGFAP04085 AC008496.1-201ENST00000509131 295 ntBASIC6.83□□□□□ -1.32
PDGFAP04085 RN7SKP98-201ENST00000517070 156 ntBASIC6.83□□□□□ -1.32
PDGFAP04085 DEFB131D-201ENST00000526803 184 ntBASIC6.83□□□□□ -1.32
PDGFAP04085 RGS4-207ENST00000527809 817 ntTSL 4 BASIC6.83□□□□□ -1.32
PDGFAP04085 OR5BC1P-201ENST00000529327 739 ntBASIC6.83□□□□□ -1.32
PDGFAP04085 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC6.83□□□□□ -1.32
PDGFAP04085 GLYCAM1-201ENST00000546596 285 ntBASIC6.83□□□□□ -1.32
PDGFAP04085 OVCH1-AS1-202ENST00000550906 654 ntTSL 3 BASIC6.83□□□□□ -1.32
PDGFAP04085 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms