Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
HLA-DQA1P01909 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
HLA-DQA1P01909 FTX-210ENST00000603037 8347 ntTSL 5 BASIC3.96□□□□□ -1.78
HLA-DQA1P01909 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC3.95□□□□□ -1.78
HLA-DQA1P01909 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
HLA-DQA1P01909 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
HLA-DQA1P01909 LYARP1-201ENST00000436977 1501 ntBASIC3.95□□□□□ -1.78
HLA-DQA1P01909 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
HLA-DQA1P01909 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
HLA-DQA1P01909 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC3.95□□□□□ -1.78
HLA-DQA1P01909 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
HLA-DQA1P01909 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
HLA-DQA1P01909 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
HLA-DQA1P01909 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC3.95□□□□□ -1.78
HLA-DQA1P01909 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC3.95□□□□□ -1.78
HLA-DQA1P01909 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC3.95□□□□□ -1.78
HLA-DQA1P01909 CR382285.2-201ENST00000624662 1495 ntBASIC3.95□□□□□ -1.78
HLA-DQA1P01909 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC3.95□□□□□ -1.78
HLA-DQA1P01909 OR56A4-201ENST00000330728 1209 ntBASIC3.95□□□□□ -1.78
HLA-DQA1P01909 RN7SKP187-201ENST00000365536 330 ntBASIC3.95□□□□□ -1.78
HLA-DQA1P01909 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
HLA-DQA1P01909 MRRF-207ENST00000373729 870 ntTSL 3 BASIC3.95□□□□□ -1.78
HLA-DQA1P01909 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
HLA-DQA1P01909 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
HLA-DQA1P01909 DBIP1-201ENST00000401435 260 ntBASIC3.95□□□□□ -1.78
HLA-DQA1P01909 AP000580.1-201ENST00000404439 358 ntBASIC3.95□□□□□ -1.78
HLA-DQA1P01909 OR2AT2P-201ENST00000413438 905 ntBASIC3.95□□□□□ -1.78
HLA-DQA1P01909 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
HLA-DQA1P01909 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC3.95□□□□□ -1.78
HLA-DQA1P01909 FABP7P2-201ENST00000429946 379 ntBASIC3.95□□□□□ -1.78
HLA-DQA1P01909 AC126120.1-201ENST00000431082 470 ntBASIC3.95□□□□□ -1.78
HLA-DQA1P01909 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
HLA-DQA1P01909 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
HLA-DQA1P01909 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
HLA-DQA1P01909 PNKDP1-201ENST00000435914 430 ntBASIC3.95□□□□□ -1.78
HLA-DQA1P01909 ATP6V1E1P1-201ENST00000439215 681 ntBASIC3.95□□□□□ -1.78
HLA-DQA1P01909 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC3.95□□□□□ -1.78
HLA-DQA1P01909 ARL4AP3-201ENST00000441452 574 ntBASIC3.95□□□□□ -1.78
HLA-DQA1P01909 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC3.95□□□□□ -1.78
HLA-DQA1P01909 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC3.95□□□□□ -1.78
HLA-DQA1P01909 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
HLA-DQA1P01909 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC3.95□□□□□ -1.78
HLA-DQA1P01909 PPIAP27-201ENST00000453800 265 ntBASIC3.95□□□□□ -1.78
HLA-DQA1P01909 CTSLP6-201ENST00000458273 1002 ntBASIC3.95□□□□□ -1.78
HLA-DQA1P01909 RN7SL168P-201ENST00000463821 279 ntBASIC3.95□□□□□ -1.78
HLA-DQA1P01909 AP000926.3-201ENST00000497201 299 ntBASIC3.95□□□□□ -1.78
HLA-DQA1P01909 AC091874.2-201ENST00000505889 720 ntBASIC3.95□□□□□ -1.78
HLA-DQA1P01909 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC3.95□□□□□ -1.78
HLA-DQA1P01909 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC3.95□□□□□ -1.78
HLA-DQA1P01909 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC3.95□□□□□ -1.78
HLA-DQA1P01909 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC3.95□□□□□ -1.78
HLA-DQA1P01909 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC3.95□□□□□ -1.78
HLA-DQA1P01909 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC3.95□□□□□ -1.78
HLA-DQA1P01909 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC3.95□□□□□ -1.78
HLA-DQA1P01909 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC3.95□□□□□ -1.78
HLA-DQA1P01909 AC084033.1-201ENST00000550830 633 ntBASIC3.95□□□□□ -1.78
HLA-DQA1P01909 AC007956.1-201ENST00000555623 542 ntBASIC3.95□□□□□ -1.78
HLA-DQA1P01909 CYCSP38-201ENST00000559840 322 ntBASIC3.95□□□□□ -1.78
HLA-DQA1P01909 AC026826.3-201ENST00000561747 158 ntBASIC3.95□□□□□ -1.78
HLA-DQA1P01909 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC3.95□□□□□ -1.78
HLA-DQA1P01909 MIR4776-2-201ENST00000580204 80 ntBASIC3.95□□□□□ -1.78
HLA-DQA1P01909 RN7SL356P-201ENST00000582228 248 ntBASIC3.95□□□□□ -1.78
HLA-DQA1P01909 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC3.95□□□□□ -1.78
HLA-DQA1P01909 CDC42EP3P1-201ENST00000601004 764 ntBASIC3.95□□□□□ -1.78
HLA-DQA1P01909 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC3.95□□□□□ -1.78
HLA-DQA1P01909 AL591926.1-201ENST00000620542 217 ntBASIC3.95□□□□□ -1.78
HLA-DQA1P01909 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC3.95□□□□□ -1.78
HLA-DQA1P01909 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
HLA-DQA1P01909 AC097461.1-201ENST00000568928 2821 ntBASIC3.95□□□□□ -1.78
HLA-DQA1P01909 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC3.95□□□□□ -1.78
HLA-DQA1P01909 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC3.95□□□□□ -1.78
HLA-DQA1P01909 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
HLA-DQA1P01909 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC3.95□□□□□ -1.78
HLA-DQA1P01909 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
HLA-DQA1P01909 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
HLA-DQA1P01909 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
HLA-DQA1P01909 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC3.95□□□□□ -1.78
HLA-DQA1P01909 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
HLA-DQA1P01909 AL133268.1-201ENST00000405676 1401 ntBASIC3.95□□□□□ -1.78
HLA-DQA1P01909 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC3.95□□□□□ -1.78
HLA-DQA1P01909 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
HLA-DQA1P01909 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC3.95□□□□□ -1.78
HLA-DQA1P01909 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
HLA-DQA1P01909 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
HLA-DQA1P01909 DDX18P6-201ENST00000450119 1997 ntBASIC3.94□□□□□ -1.78
HLA-DQA1P01909 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC3.94□□□□□ -1.78
HLA-DQA1P01909 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC3.94□□□□□ -1.78
HLA-DQA1P01909 AC093909.5-201ENST00000621839 1799 ntBASIC3.94□□□□□ -1.78
HLA-DQA1P01909 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
HLA-DQA1P01909 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
HLA-DQA1P01909 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
HLA-DQA1P01909 HSPA8P18-201ENST00000439846 1928 ntBASIC3.94□□□□□ -1.78
HLA-DQA1P01909 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
HLA-DQA1P01909 AC005294.1-201ENST00000355509 281 ntBASIC3.94□□□□□ -1.78
HLA-DQA1P01909 RNU6-1331P-201ENST00000363658 106 ntBASIC3.94□□□□□ -1.78
HLA-DQA1P01909 RNU1-146P-201ENST00000364015 165 ntBASIC3.94□□□□□ -1.78
HLA-DQA1P01909 RNA5SP433-201ENST00000364491 114 ntBASIC3.94□□□□□ -1.78
HLA-DQA1P01909 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC3.94□□□□□ -1.78
HLA-DQA1P01909 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
HLA-DQA1P01909 RPS3AP2-201ENST00000407190 754 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms