Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 RPL34P6-201ENST00000432390 345 ntBASIC5.34□□□□□ -1.55
RIPK2O43353 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC5.34□□□□□ -1.55
RIPK2O43353 CLUHP1-201ENST00000435012 1190 ntBASIC5.34□□□□□ -1.55
RIPK2O43353 AP000936.3-201ENST00000438127 255 ntBASIC5.34□□□□□ -1.55
RIPK2O43353 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.34□□□□□ -1.55
RIPK2O43353 AC019185.1-201ENST00000442718 389 ntBASIC5.34□□□□□ -1.55
RIPK2O43353 MTCO3P17-201ENST00000443775 513 ntBASIC5.34□□□□□ -1.55
RIPK2O43353 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.34□□□□□ -1.55
RIPK2O43353 AL359839.1-201ENST00000451975 1160 ntBASIC5.34□□□□□ -1.55
RIPK2O43353 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.34□□□□□ -1.55
RIPK2O43353 RN7SL189P-201ENST00000468631 289 ntBASIC5.34□□□□□ -1.55
RIPK2O43353 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
RIPK2O43353 AC021151.1-201ENST00000506933 183 ntTSL 3 BASIC5.34□□□□□ -1.55
RIPK2O43353 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC5.34□□□□□ -1.55
RIPK2O43353 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.34□□□□□ -1.55
RIPK2O43353 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.34□□□□□ -1.55
RIPK2O43353 SNORD116-30-201ENST00000516468 85 ntBASIC5.34□□□□□ -1.55
RIPK2O43353 SNORA43.3-201ENST00000517240 103 ntBASIC5.34□□□□□ -1.55
RIPK2O43353 CASP1P2-201ENST00000526830 1258 ntBASIC5.34□□□□□ -1.55
RIPK2O43353 HNRNPRP2-201ENST00000528421 743 ntBASIC5.34□□□□□ -1.55
RIPK2O43353 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RIPK2O43353 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC5.34□□□□□ -1.55
RIPK2O43353 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.34□□□□□ -1.55
RIPK2O43353 AC092121.1-201ENST00000569452 202 ntBASIC5.34□□□□□ -1.55
RIPK2O43353 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.34□□□□□ -1.55
RIPK2O43353 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC5.34□□□□□ -1.55
RIPK2O43353 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC5.34□□□□□ -1.55
RIPK2O43353 AC023813.4-201ENST00000607580 580 ntBASIC5.34□□□□□ -1.55
RIPK2O43353 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
RIPK2O43353 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.34□□□□□ -1.55
RIPK2O43353 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.34□□□□□ -1.55
RIPK2O43353 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.34□□□□□ -1.55
RIPK2O43353 AC129778.1-202ENST00000623812 261 ntBASIC5.34□□□□□ -1.55
RIPK2O43353 AP002967.1-201ENST00000624203 539 ntBASIC5.34□□□□□ -1.55
RIPK2O43353 AL591379.1-207ENST00000635982 261 ntBASIC5.34□□□□□ -1.55
RIPK2O43353 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.34□□□□□ -1.55
RIPK2O43353 TMEM30CP-203ENST00000637814 1035 ntBASIC5.34□□□□□ -1.55
RIPK2O43353 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.34□□□□□ -1.55
RIPK2O43353 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
RIPK2O43353 AC063976.2-201ENST00000425667 3556 ntBASIC5.34□□□□□ -1.55
RIPK2O43353 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RIPK2O43353 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.34□□□□□ -1.55
RIPK2O43353 AC093591.2-201ENST00000565254 3843 ntBASIC5.34□□□□□ -1.56
RIPK2O43353 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.34□□□□□ -1.56
RIPK2O43353 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
RIPK2O43353 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
RIPK2O43353 YES1P1-201ENST00000418510 1628 ntBASIC5.34□□□□□ -1.56
RIPK2O43353 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.33□□□□□ -1.56
RIPK2O43353 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.33□□□□□ -1.56
RIPK2O43353 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
RIPK2O43353 AL121950.1-201ENST00000624993 2077 ntBASIC5.33□□□□□ -1.56
RIPK2O43353 NXF4-202ENST00000416098 1465 ntBASIC5.33□□□□□ -1.56
RIPK2O43353 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
RIPK2O43353 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.33□□□□□ -1.56
RIPK2O43353 BTBD10P1-201ENST00000549824 1352 ntBASIC5.33□□□□□ -1.56
RIPK2O43353 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.33□□□□□ -1.56
RIPK2O43353 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
RIPK2O43353 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.33□□□□□ -1.56
RIPK2O43353 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.33□□□□□ -1.56
RIPK2O43353 RN7SKP171-201ENST00000364417 303 ntBASIC5.33□□□□□ -1.56
RIPK2O43353 RN7SKP28-201ENST00000364770 305 ntBASIC5.33□□□□□ -1.56
RIPK2O43353 TIMM8BP2-201ENST00000445940 251 ntBASIC5.33□□□□□ -1.56
RIPK2O43353 MRPL35P2-201ENST00000448009 511 ntBASIC5.33□□□□□ -1.56
RIPK2O43353 RAB28P3-201ENST00000448325 597 ntBASIC5.33□□□□□ -1.56
RIPK2O43353 AC093166.3-201ENST00000448785 303 ntBASIC5.33□□□□□ -1.56
RIPK2O43353 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC5.33□□□□□ -1.56
RIPK2O43353 LDHBP2-201ENST00000456969 1005 ntBASIC5.33□□□□□ -1.56
RIPK2O43353 ACA64.1-201ENST00000459171 127 ntBASIC5.33□□□□□ -1.56
RIPK2O43353 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RIPK2O43353 RFPL4AP5-201ENST00000514977 504 ntBASIC5.33□□□□□ -1.56
RIPK2O43353 BNIP3P1-201ENST00000547295 580 ntBASIC5.33□□□□□ -1.56
RIPK2O43353 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.33□□□□□ -1.56
RIPK2O43353 AC115989.2-201ENST00000578640 563 ntBASIC5.33□□□□□ -1.56
RIPK2O43353 RN7SL435P-201ENST00000584418 282 ntBASIC5.33□□□□□ -1.56
RIPK2O43353 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC5.33□□□□□ -1.56
RIPK2O43353 AC008814.1-201ENST00000603797 406 ntBASIC5.33□□□□□ -1.56
RIPK2O43353 AC096553.1-201ENST00000605169 829 ntBASIC5.33□□□□□ -1.56
RIPK2O43353 AL592494.3-201ENST00000609485 464 ntBASIC5.33□□□□□ -1.56
RIPK2O43353 AC103703.1-201ENST00000634783 663 ntBASIC5.33□□□□□ -1.56
RIPK2O43353 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.33□□□□□ -1.56
RIPK2O43353 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RIPK2O43353 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RIPK2O43353 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.33□□□□□ -1.56
RIPK2O43353 OR10AB1P-202ENST00000641219 1686 ntBASIC5.33□□□□□ -1.56
RIPK2O43353 AP001642.1-201ENST00000624727 2117 ntBASIC5.33□□□□□ -1.56
RIPK2O43353 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.33□□□□□ -1.56
RIPK2O43353 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.32□□□□□ -1.56
RIPK2O43353 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RIPK2O43353 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RIPK2O43353 AL356317.1-201ENST00000396110 1436 ntBASIC5.32□□□□□ -1.56
RIPK2O43353 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RIPK2O43353 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.32□□□□□ -1.56
RIPK2O43353 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
RIPK2O43353 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RIPK2O43353 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RIPK2O43353 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RIPK2O43353 RNU4-7P-201ENST00000364758 141 ntBASIC5.32□□□□□ -1.56
RIPK2O43353 UBBP2-201ENST00000376781 231 ntBASIC5.32□□□□□ -1.56
RIPK2O43353 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
RIPK2O43353 RNU1-74P-201ENST00000384108 171 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 162.2 ms