Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
TRIM49D1C9J1S8 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
TRIM49D1C9J1S8 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.11□□□□□ -1.59
TRIM49D1C9J1S8 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.11□□□□□ -1.59
TRIM49D1C9J1S8 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.11□□□□□ -1.59
TRIM49D1C9J1S8 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
TRIM49D1C9J1S8 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
TRIM49D1C9J1S8 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
TRIM49D1C9J1S8 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.11□□□□□ -1.59
TRIM49D1C9J1S8 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
TRIM49D1C9J1S8 RNU1-77P-201ENST00000390868 162 ntBASIC5.11□□□□□ -1.59
TRIM49D1C9J1S8 RNU1-149P-201ENST00000390870 161 ntBASIC5.11□□□□□ -1.59
TRIM49D1C9J1S8 AL078599.1-201ENST00000402075 293 ntBASIC5.11□□□□□ -1.59
TRIM49D1C9J1S8 AC012075.1-201ENST00000436549 580 ntBASIC5.11□□□□□ -1.59
TRIM49D1C9J1S8 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.11□□□□□ -1.59
TRIM49D1C9J1S8 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.11□□□□□ -1.59
TRIM49D1C9J1S8 TPT1P1-201ENST00000458495 518 ntBASIC5.11□□□□□ -1.59
TRIM49D1C9J1S8 RPL35AP19-201ENST00000469425 329 ntBASIC5.11□□□□□ -1.59
TRIM49D1C9J1S8 RN7SL447P-201ENST00000494711 245 ntBASIC5.11□□□□□ -1.59
TRIM49D1C9J1S8 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.11□□□□□ -1.59
TRIM49D1C9J1S8 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.11□□□□□ -1.59
TRIM49D1C9J1S8 AC020937.1-201ENST00000519677 1013 ntBASIC5.11□□□□□ -1.59
TRIM49D1C9J1S8 RPL23AP53-201ENST00000521854 457 ntBASIC5.11□□□□□ -1.59
TRIM49D1C9J1S8 AC112191.2-201ENST00000522428 333 ntBASIC5.11□□□□□ -1.59
TRIM49D1C9J1S8 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC5.11□□□□□ -1.59
TRIM49D1C9J1S8 HNRNPRP2-201ENST00000528421 743 ntBASIC5.11□□□□□ -1.59
TRIM49D1C9J1S8 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.11□□□□□ -1.59
TRIM49D1C9J1S8 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.11□□□□□ -1.59
TRIM49D1C9J1S8 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC5.11□□□□□ -1.59
TRIM49D1C9J1S8 NDUFB4P11-201ENST00000560510 395 ntBASIC5.11□□□□□ -1.59
TRIM49D1C9J1S8 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC5.11□□□□□ -1.59
TRIM49D1C9J1S8 AC023389.2-201ENST00000580031 955 ntBASIC5.11□□□□□ -1.59
TRIM49D1C9J1S8 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.11□□□□□ -1.59
TRIM49D1C9J1S8 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.11□□□□□ -1.59
TRIM49D1C9J1S8 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC5.11□□□□□ -1.59
TRIM49D1C9J1S8 AP005432.2-201ENST00000608162 586 ntBASIC5.11□□□□□ -1.59
TRIM49D1C9J1S8 AL353684.1-201ENST00000622677 1120 ntBASIC5.11□□□□□ -1.59
TRIM49D1C9J1S8 AP001962.1-201ENST00000624114 559 ntBASIC5.11□□□□□ -1.59
TRIM49D1C9J1S8 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.11□□□□□ -1.59
TRIM49D1C9J1S8 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.11□□□□□ -1.59
TRIM49D1C9J1S8 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC5.11□□□□□ -1.59
TRIM49D1C9J1S8 AC074101.1-201ENST00000637861 241 ntBASIC5.11□□□□□ -1.59
TRIM49D1C9J1S8 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
TRIM49D1C9J1S8 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.11□□□□□ -1.59
TRIM49D1C9J1S8 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
TRIM49D1C9J1S8 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
TRIM49D1C9J1S8 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
TRIM49D1C9J1S8 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
TRIM49D1C9J1S8 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
TRIM49D1C9J1S8 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
TRIM49D1C9J1S8 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
TRIM49D1C9J1S8 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
TRIM49D1C9J1S8 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
TRIM49D1C9J1S8 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
TRIM49D1C9J1S8 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
TRIM49D1C9J1S8 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
TRIM49D1C9J1S8 SNORA2.3-201ENST00000383920 135 ntBASIC5.1□□□□□ -1.59
TRIM49D1C9J1S8 RNA5SP284-201ENST00000384547 118 ntBASIC5.1□□□□□ -1.59
TRIM49D1C9J1S8 RNA5SP339-201ENST00000390987 122 ntBASIC5.1□□□□□ -1.59
TRIM49D1C9J1S8 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC5.1□□□□□ -1.59
TRIM49D1C9J1S8 EI24P4-201ENST00000423683 1078 ntBASIC5.1□□□□□ -1.59
TRIM49D1C9J1S8 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.1□□□□□ -1.59
TRIM49D1C9J1S8 AL389925.1-201ENST00000432257 728 ntBASIC5.1□□□□□ -1.59
TRIM49D1C9J1S8 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.1□□□□□ -1.59
TRIM49D1C9J1S8 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TRIM49D1C9J1S8 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TRIM49D1C9J1S8 AC100832.1-201ENST00000471945 383 ntBASIC5.1□□□□□ -1.59
TRIM49D1C9J1S8 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TRIM49D1C9J1S8 SIAH1P1-201ENST00000479411 923 ntBASIC5.1□□□□□ -1.59
TRIM49D1C9J1S8 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.1□□□□□ -1.59
TRIM49D1C9J1S8 EIF1P7-201ENST00000487533 337 ntBASIC5.1□□□□□ -1.59
TRIM49D1C9J1S8 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.1□□□□□ -1.59
TRIM49D1C9J1S8 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.1□□□□□ -1.59
TRIM49D1C9J1S8 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.1□□□□□ -1.59
TRIM49D1C9J1S8 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.1□□□□□ -1.59
TRIM49D1C9J1S8 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.1□□□□□ -1.59
TRIM49D1C9J1S8 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.1□□□□□ -1.59
TRIM49D1C9J1S8 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.1□□□□□ -1.59
TRIM49D1C9J1S8 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.1□□□□□ -1.59
TRIM49D1C9J1S8 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
TRIM49D1C9J1S8 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.1□□□□□ -1.59
TRIM49D1C9J1S8 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.1□□□□□ -1.59
TRIM49D1C9J1S8 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.1□□□□□ -1.59
TRIM49D1C9J1S8 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TRIM49D1C9J1S8 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.1□□□□□ -1.59
TRIM49D1C9J1S8 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC5.1□□□□□ -1.59
TRIM49D1C9J1S8 FO393422.1-201ENST00000603908 708 ntBASIC5.1□□□□□ -1.59
TRIM49D1C9J1S8 AL137246.1-201ENST00000607072 977 ntBASIC5.1□□□□□ -1.59
TRIM49D1C9J1S8 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC5.1□□□□□ -1.59
TRIM49D1C9J1S8 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.1□□□□□ -1.59
TRIM49D1C9J1S8 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.1□□□□□ -1.59
TRIM49D1C9J1S8 CYP4F35P-202ENST00000636121 390 ntBASIC5.1□□□□□ -1.59
TRIM49D1C9J1S8 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.1□□□□□ -1.59
TRIM49D1C9J1S8 AC135068.12-201ENST00000637370 931 ntBASIC5.1□□□□□ -1.59
TRIM49D1C9J1S8 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.1□□□□□ -1.59
TRIM49D1C9J1S8 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
TRIM49D1C9J1S8 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
TRIM49D1C9J1S8 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.09□□□□□ -1.59
TRIM49D1C9J1S8 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.09□□□□□ -1.59
TRIM49D1C9J1S8 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms