Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
RGPD3A6NKT7 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC6.44□□□□□ -1.38
RGPD3A6NKT7 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
RGPD3A6NKT7 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.44□□□□□ -1.38
RGPD3A6NKT7 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
RGPD3A6NKT7 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
RGPD3A6NKT7 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC6.44□□□□□ -1.38
RGPD3A6NKT7 AC068446.1-201ENST00000556425 1549 ntBASIC6.44□□□□□ -1.38
RGPD3A6NKT7 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC6.44□□□□□ -1.38
RGPD3A6NKT7 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
RGPD3A6NKT7 PCDH15-230ENST00000617051 7048 ntTSL 5 BASIC6.44□□□□□ -1.38
RGPD3A6NKT7 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC6.44□□□□□ -1.38
RGPD3A6NKT7 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
RGPD3A6NKT7 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC6.44□□□□□ -1.38
RGPD3A6NKT7 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
RGPD3A6NKT7 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
RGPD3A6NKT7 OR4K17-201ENST00000315543 1032 ntBASIC6.44□□□□□ -1.38
RGPD3A6NKT7 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC6.44□□□□□ -1.38
RGPD3A6NKT7 RNU4-64P-201ENST00000410795 131 ntBASIC6.44□□□□□ -1.38
RGPD3A6NKT7 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
RGPD3A6NKT7 NOP56P2-201ENST00000447491 769 ntBASIC6.44□□□□□ -1.38
RGPD3A6NKT7 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC6.44□□□□□ -1.38
RGPD3A6NKT7 AP002812.1-201ENST00000495378 474 ntBASIC6.44□□□□□ -1.38
RGPD3A6NKT7 RNU2-30P-201ENST00000516209 141 ntBASIC6.44□□□□□ -1.38
RGPD3A6NKT7 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.44□□□□□ -1.38
RGPD3A6NKT7 FAM174B-202ENST00000553393 495 ntTSL 2 BASIC6.44□□□□□ -1.38
RGPD3A6NKT7 MIR4429-201ENST00000580105 73 ntBASIC6.44□□□□□ -1.38
RGPD3A6NKT7 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC6.44□□□□□ -1.38
RGPD3A6NKT7 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
RGPD3A6NKT7 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC6.44□□□□□ -1.38
RGPD3A6NKT7 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC6.44□□□□□ -1.38
RGPD3A6NKT7 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
RGPD3A6NKT7 AC079097.1-201ENST00000512187 1399 ntBASIC6.43□□□□□ -1.38
RGPD3A6NKT7 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC6.43□□□□□ -1.38
RGPD3A6NKT7 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
RGPD3A6NKT7 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC6.43□□□□□ -1.38
RGPD3A6NKT7 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC6.43□□□□□ -1.38
RGPD3A6NKT7 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
RGPD3A6NKT7 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
RGPD3A6NKT7 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC6.43□□□□□ -1.38
RGPD3A6NKT7 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
RGPD3A6NKT7 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
RGPD3A6NKT7 RUNX1T1-205ENST00000436581 7454 ntTSL 5 BASIC6.43□□□□□ -1.38
RGPD3A6NKT7 ADGRL3-207ENST00000507625 4843 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
RGPD3A6NKT7 RNA5SP509-201ENST00000364577 119 ntBASIC6.43□□□□□ -1.38
RGPD3A6NKT7 U3.28-201ENST00000391249 210 ntBASIC6.43□□□□□ -1.38
RGPD3A6NKT7 LINC01881-201ENST00000416103 412 ntBASIC6.43□□□□□ -1.38
RGPD3A6NKT7 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC6.43□□□□□ -1.38
RGPD3A6NKT7 AC000111.2-201ENST00000448200 210 ntBASIC6.43□□□□□ -1.38
RGPD3A6NKT7 RPL7P41-201ENST00000485823 957 ntBASIC6.43□□□□□ -1.38
RGPD3A6NKT7 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC6.43□□□□□ -1.38
RGPD3A6NKT7 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC6.43□□□□□ -1.38
RGPD3A6NKT7 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC6.43□□□□□ -1.38
RGPD3A6NKT7 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC6.43□□□□□ -1.38
RGPD3A6NKT7 MIR3939-201ENST00000582614 106 ntBASIC6.43□□□□□ -1.38
RGPD3A6NKT7 AC245389.1-201ENST00000605141 529 ntBASIC6.43□□□□□ -1.38
RGPD3A6NKT7 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
RGPD3A6NKT7 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC6.43□□□□□ -1.38
RGPD3A6NKT7 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
RGPD3A6NKT7 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC6.43□□□□□ -1.38
RGPD3A6NKT7 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC6.42□□□□□ -1.38
RGPD3A6NKT7 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
RGPD3A6NKT7 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
RGPD3A6NKT7 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
RGPD3A6NKT7 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC6.42□□□□□ -1.38
RGPD3A6NKT7 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
RGPD3A6NKT7 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
RGPD3A6NKT7 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
RGPD3A6NKT7 RPL23AP17-201ENST00000401064 499 ntBASIC6.42□□□□□ -1.38
RGPD3A6NKT7 HYALP1-201ENST00000417674 1279 ntBASIC6.42□□□□□ -1.38
RGPD3A6NKT7 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC6.42□□□□□ -1.38
RGPD3A6NKT7 AC098976.1-201ENST00000513014 541 ntBASIC6.42□□□□□ -1.38
RGPD3A6NKT7 MED28P5-201ENST00000528254 438 ntBASIC6.42□□□□□ -1.38
RGPD3A6NKT7 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC6.42□□□□□ -1.38
RGPD3A6NKT7 AL161637.1-201ENST00000622380 412 ntBASIC6.42□□□□□ -1.38
RGPD3A6NKT7 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC6.42□□□□□ -1.38
RGPD3A6NKT7 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
RGPD3A6NKT7 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
RGPD3A6NKT7 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
RGPD3A6NKT7 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC6.42□□□□□ -1.38
RGPD3A6NKT7 POMP-202ENST00000460403 1428 ntTSL 3 BASIC6.42□□□□□ -1.38
RGPD3A6NKT7 PTER-201ENST00000298942 3448 ntTSL 5 BASIC6.42□□□□□ -1.38
RGPD3A6NKT7 AL161912.2-201ENST00000565707 3007 ntBASIC6.42□□□□□ -1.38
RGPD3A6NKT7 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC6.42□□□□□ -1.38
RGPD3A6NKT7 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC6.42□□□□□ -1.38
RGPD3A6NKT7 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
RGPD3A6NKT7 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
RGPD3A6NKT7 AC099654.2-201ENST00000433031 1980 ntBASIC6.42□□□□□ -1.38
RGPD3A6NKT7 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
RGPD3A6NKT7 Z95114.1-201ENST00000624264 14574 ntBASIC6.42□□□□□ -1.38
RGPD3A6NKT7 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
RGPD3A6NKT7 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
RGPD3A6NKT7 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
RGPD3A6NKT7 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
RGPD3A6NKT7 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC6.42□□□□□ -1.38
RGPD3A6NKT7 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
RGPD3A6NKT7 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
RGPD3A6NKT7 RNU1-64P-201ENST00000365443 163 ntBASIC6.41□□□□□ -1.38
RGPD3A6NKT7 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
RGPD3A6NKT7 AL359837.1-201ENST00000381357 287 ntBASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms