Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
RBFOX3A6NFN3 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.15□□□□□ -1.75
RBFOX3A6NFN3 AC093775.1-201ENST00000624154 1868 ntBASIC4.15□□□□□ -1.75
RBFOX3A6NFN3 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.15□□□□□ -1.75
RBFOX3A6NFN3 AC000123.3-201ENST00000624029 4975 ntBASIC4.15□□□□□ -1.75
RBFOX3A6NFN3 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
RBFOX3A6NFN3 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.15□□□□□ -1.75
RBFOX3A6NFN3 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.14□□□□□ -1.75
RBFOX3A6NFN3 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.14□□□□□ -1.75
RBFOX3A6NFN3 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
RBFOX3A6NFN3 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
RBFOX3A6NFN3 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
RBFOX3A6NFN3 AC005294.1-201ENST00000355509 281 ntBASIC4.14□□□□□ -1.75
RBFOX3A6NFN3 MIR589-201ENST00000385238 99 ntBASIC4.14□□□□□ -1.75
RBFOX3A6NFN3 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
RBFOX3A6NFN3 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC4.14□□□□□ -1.75
RBFOX3A6NFN3 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC4.14□□□□□ -1.75
RBFOX3A6NFN3 AC092865.3-201ENST00000425390 1026 ntBASIC4.14□□□□□ -1.75
RBFOX3A6NFN3 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC4.14□□□□□ -1.75
RBFOX3A6NFN3 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC4.14□□□□□ -1.75
RBFOX3A6NFN3 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC4.14□□□□□ -1.75
RBFOX3A6NFN3 FGF12-202ENST00000430714 603 ntTSL 2 BASIC4.14□□□□□ -1.75
RBFOX3A6NFN3 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
RBFOX3A6NFN3 HMGB3P10-201ENST00000434734 572 ntBASIC4.14□□□□□ -1.75
RBFOX3A6NFN3 AL353662.1-201ENST00000439099 327 ntBASIC4.14□□□□□ -1.75
RBFOX3A6NFN3 AC073587.1-201ENST00000447093 876 ntBASIC4.14□□□□□ -1.75
RBFOX3A6NFN3 AL591363.1-201ENST00000450091 483 ntBASIC4.14□□□□□ -1.75
RBFOX3A6NFN3 AC104339.1-201ENST00000465478 348 ntBASIC4.14□□□□□ -1.75
RBFOX3A6NFN3 AC108751.2-201ENST00000469993 231 ntBASIC4.14□□□□□ -1.75
RBFOX3A6NFN3 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC4.14□□□□□ -1.75
RBFOX3A6NFN3 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
RBFOX3A6NFN3 AC092754.1-201ENST00000472975 479 ntBASIC4.14□□□□□ -1.75
RBFOX3A6NFN3 AC117394.1-201ENST00000477323 567 ntBASIC4.14□□□□□ -1.75
RBFOX3A6NFN3 RPL7AP10-201ENST00000481016 791 ntBASIC4.14□□□□□ -1.75
RBFOX3A6NFN3 AC009120.1-201ENST00000493458 473 ntBASIC4.14□□□□□ -1.75
RBFOX3A6NFN3 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.14□□□□□ -1.75
RBFOX3A6NFN3 HMGN1P17-201ENST00000513734 295 ntBASIC4.14□□□□□ -1.75
RBFOX3A6NFN3 IGLV3-30-201ENST00000524362 298 ntBASIC4.14□□□□□ -1.75
RBFOX3A6NFN3 HNRNPRP2-201ENST00000528421 743 ntBASIC4.14□□□□□ -1.75
RBFOX3A6NFN3 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC4.14□□□□□ -1.75
RBFOX3A6NFN3 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.14□□□□□ -1.75
RBFOX3A6NFN3 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.14□□□□□ -1.75
RBFOX3A6NFN3 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC4.14□□□□□ -1.75
RBFOX3A6NFN3 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.14□□□□□ -1.75
RBFOX3A6NFN3 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
RBFOX3A6NFN3 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC4.14□□□□□ -1.75
RBFOX3A6NFN3 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC4.14□□□□□ -1.75
RBFOX3A6NFN3 MIR4675-201ENST00000577898 77 ntBASIC4.14□□□□□ -1.75
RBFOX3A6NFN3 AP005119.1-201ENST00000580956 292 ntBASIC4.14□□□□□ -1.75
RBFOX3A6NFN3 AC005244.1-201ENST00000582566 339 ntBASIC4.14□□□□□ -1.75
RBFOX3A6NFN3 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC4.14□□□□□ -1.75
RBFOX3A6NFN3 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC4.14□□□□□ -1.75
RBFOX3A6NFN3 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC4.14□□□□□ -1.75
RBFOX3A6NFN3 uc_338.31-201ENST00000615595 186 ntBASIC4.14□□□□□ -1.75
RBFOX3A6NFN3 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC4.14□□□□□ -1.75
RBFOX3A6NFN3 AL591926.1-201ENST00000620542 217 ntBASIC4.14□□□□□ -1.75
RBFOX3A6NFN3 AC073593.1-201ENST00000624500 411 ntBASIC4.14□□□□□ -1.75
RBFOX3A6NFN3 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC4.14□□□□□ -1.75
RBFOX3A6NFN3 RFC1-217ENST00000639695 867 ntTSL 5 BASIC4.14□□□□□ -1.75
RBFOX3A6NFN3 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
RBFOX3A6NFN3 HSPA8P18-201ENST00000439846 1928 ntBASIC4.14□□□□□ -1.75
RBFOX3A6NFN3 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
RBFOX3A6NFN3 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.14□□□□□ -1.75
RBFOX3A6NFN3 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
RBFOX3A6NFN3 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
RBFOX3A6NFN3 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
RBFOX3A6NFN3 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
RBFOX3A6NFN3 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
RBFOX3A6NFN3 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.13□□□□□ -1.75
RBFOX3A6NFN3 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.13□□□□□ -1.75
RBFOX3A6NFN3 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RBFOX3A6NFN3 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
RBFOX3A6NFN3 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC4.13□□□□□ -1.75
RBFOX3A6NFN3 MAPK10-286ENST00000641208 8747 ntBASIC4.13□□□□□ -1.75
RBFOX3A6NFN3 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RBFOX3A6NFN3 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.13□□□□□ -1.75
RBFOX3A6NFN3 AC008627.1-201ENST00000517511 1704 ntBASIC4.13□□□□□ -1.75
RBFOX3A6NFN3 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RBFOX3A6NFN3 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
RBFOX3A6NFN3 AC006210.2-201ENST00000367074 1545 ntBASIC4.13□□□□□ -1.75
RBFOX3A6NFN3 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RBFOX3A6NFN3 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RBFOX3A6NFN3 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
RBFOX3A6NFN3 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
RBFOX3A6NFN3 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC4.13□□□□□ -1.75
RBFOX3A6NFN3 RNU6-1331P-201ENST00000363658 106 ntBASIC4.13□□□□□ -1.75
RBFOX3A6NFN3 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC4.13□□□□□ -1.75
RBFOX3A6NFN3 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
RBFOX3A6NFN3 BMS1P3-201ENST00000372011 932 ntBASIC4.13□□□□□ -1.75
RBFOX3A6NFN3 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
RBFOX3A6NFN3 RNU6-167P-201ENST00000384292 106 ntBASIC4.13□□□□□ -1.75
RBFOX3A6NFN3 CXADRP1-201ENST00000398098 1095 ntBASIC4.13□□□□□ -1.75
RBFOX3A6NFN3 YWHAZP6-201ENST00000399764 738 ntBASIC4.13□□□□□ -1.75
RBFOX3A6NFN3 AL035079.1-201ENST00000405210 287 ntBASIC4.13□□□□□ -1.75
RBFOX3A6NFN3 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.13□□□□□ -1.75
RBFOX3A6NFN3 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.13□□□□□ -1.75
RBFOX3A6NFN3 E2F6P2-201ENST00000420708 748 ntBASIC4.13□□□□□ -1.75
RBFOX3A6NFN3 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.13□□□□□ -1.75
RBFOX3A6NFN3 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC4.13□□□□□ -1.75
RBFOX3A6NFN3 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms