Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
SSX2IPQ9Y2D8 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
SSX2IPQ9Y2D8 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
SSX2IPQ9Y2D8 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
SSX2IPQ9Y2D8 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.42
SSX2IPQ9Y2D8 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SSX2IPQ9Y2D8 RN7SKP162-201ENST00000363605 345 ntBASIC6.21□□□□□ -1.42
SSX2IPQ9Y2D8 DNAJA1P3-201ENST00000399417 1194 ntBASIC6.21□□□□□ -1.42
SSX2IPQ9Y2D8 ZSCAN12P1-201ENST00000406489 419 ntBASIC6.21□□□□□ -1.42
SSX2IPQ9Y2D8 AL355433.1-201ENST00000422804 300 ntBASIC6.21□□□□□ -1.42
SSX2IPQ9Y2D8 AC113412.1-201ENST00000425840 504 ntBASIC6.21□□□□□ -1.42
SSX2IPQ9Y2D8 AL627308.1-201ENST00000435693 821 ntBASIC6.21□□□□□ -1.42
SSX2IPQ9Y2D8 AL645931.1-201ENST00000439737 410 ntBASIC6.21□□□□□ -1.42
SSX2IPQ9Y2D8 AL663074.2-201ENST00000440621 479 ntBASIC6.21□□□□□ -1.42
SSX2IPQ9Y2D8 CUBNP2-201ENST00000443534 1139 ntBASIC6.21□□□□□ -1.42
SSX2IPQ9Y2D8 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC6.21□□□□□ -1.42
SSX2IPQ9Y2D8 AC093166.4-201ENST00000457867 318 ntBASIC6.21□□□□□ -1.42
SSX2IPQ9Y2D8 ACA64.4-201ENST00000459070 127 ntBASIC6.21□□□□□ -1.42
SSX2IPQ9Y2D8 RNU1-88P-201ENST00000459274 128 ntBASIC6.21□□□□□ -1.42
SSX2IPQ9Y2D8 RPS23P6-201ENST00000466136 431 ntBASIC6.21□□□□□ -1.42
SSX2IPQ9Y2D8 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.42
SSX2IPQ9Y2D8 PFN1P6-201ENST00000476786 399 ntBASIC6.21□□□□□ -1.42
SSX2IPQ9Y2D8 SUMO2P4-201ENST00000504193 276 ntBASIC6.21□□□□□ -1.42
SSX2IPQ9Y2D8 DUTP7-201ENST00000507982 486 ntBASIC6.21□□□□□ -1.42
SSX2IPQ9Y2D8 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC6.21□□□□□ -1.42
SSX2IPQ9Y2D8 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC6.21□□□□□ -1.42
SSX2IPQ9Y2D8 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC6.21□□□□□ -1.42
SSX2IPQ9Y2D8 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC6.21□□□□□ -1.42
SSX2IPQ9Y2D8 KCTD9P6-201ENST00000522306 950 ntBASIC6.21□□□□□ -1.42
SSX2IPQ9Y2D8 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC6.21□□□□□ -1.42
SSX2IPQ9Y2D8 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC6.21□□□□□ -1.42
SSX2IPQ9Y2D8 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC6.21□□□□□ -1.42
SSX2IPQ9Y2D8 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC6.21□□□□□ -1.42
SSX2IPQ9Y2D8 DCN-210ENST00000547568 823 ntTSL 3 BASIC6.21□□□□□ -1.42
SSX2IPQ9Y2D8 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC6.21□□□□□ -1.42
SSX2IPQ9Y2D8 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC6.21□□□□□ -1.42
SSX2IPQ9Y2D8 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC6.21□□□□□ -1.42
SSX2IPQ9Y2D8 AC233266.2-201ENST00000567067 528 ntBASIC6.21□□□□□ -1.42
SSX2IPQ9Y2D8 AC016180.1-201ENST00000567945 403 ntBASIC6.21□□□□□ -1.42
SSX2IPQ9Y2D8 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC6.21□□□□□ -1.42
SSX2IPQ9Y2D8 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC6.21□□□□□ -1.42
SSX2IPQ9Y2D8 BNIP3P38-201ENST00000601117 544 ntBASIC6.21□□□□□ -1.42
SSX2IPQ9Y2D8 HMGB1P51-201ENST00000605166 638 ntBASIC6.21□□□□□ -1.42
SSX2IPQ9Y2D8 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC6.21□□□□□ -1.42
SSX2IPQ9Y2D8 uc_338.26-201ENST00000612659 160 ntBASIC6.21□□□□□ -1.42
SSX2IPQ9Y2D8 AL356752.1-201ENST00000615844 593 ntBASIC6.21□□□□□ -1.42
SSX2IPQ9Y2D8 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC6.21□□□□□ -1.42
SSX2IPQ9Y2D8 AL035661.1-201ENST00000620459 1144 ntBASIC6.21□□□□□ -1.42
SSX2IPQ9Y2D8 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC6.21□□□□□ -1.42
SSX2IPQ9Y2D8 AC068880.4-201ENST00000623082 495 ntBASIC6.21□□□□□ -1.42
SSX2IPQ9Y2D8 AL390318.1-201ENST00000624564 687 ntBASIC6.21□□□□□ -1.42
SSX2IPQ9Y2D8 AL109659.3-201ENST00000624985 950 ntBASIC6.21□□□□□ -1.42
SSX2IPQ9Y2D8 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC6.21□□□□□ -1.42
SSX2IPQ9Y2D8 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
SSX2IPQ9Y2D8 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SSX2IPQ9Y2D8 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
SSX2IPQ9Y2D8 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
SSX2IPQ9Y2D8 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC6.21□□□□□ -1.42
SSX2IPQ9Y2D8 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SSX2IPQ9Y2D8 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC6.21□□□□□ -1.42
SSX2IPQ9Y2D8 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.21□□□□□ -1.42
SSX2IPQ9Y2D8 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SSX2IPQ9Y2D8 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC6.2□□□□□ -1.42
SSX2IPQ9Y2D8 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
SSX2IPQ9Y2D8 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SSX2IPQ9Y2D8 CASC19-248ENST00000641674 1356 ntBASIC6.2□□□□□ -1.42
SSX2IPQ9Y2D8 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
SSX2IPQ9Y2D8 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
SSX2IPQ9Y2D8 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
SSX2IPQ9Y2D8 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SSX2IPQ9Y2D8 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
SSX2IPQ9Y2D8 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
SSX2IPQ9Y2D8 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
SSX2IPQ9Y2D8 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SSX2IPQ9Y2D8 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
SSX2IPQ9Y2D8 RNU6-1331P-201ENST00000363658 106 ntBASIC6.2□□□□□ -1.42
SSX2IPQ9Y2D8 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC6.2□□□□□ -1.42
SSX2IPQ9Y2D8 AP000534.2-201ENST00000412729 568 ntBASIC6.2□□□□□ -1.42
SSX2IPQ9Y2D8 AC106883.1-201ENST00000418805 562 ntBASIC6.2□□□□□ -1.42
SSX2IPQ9Y2D8 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.2□□□□□ -1.42
SSX2IPQ9Y2D8 MTCO2P1-201ENST00000424648 477 ntBASIC6.2□□□□□ -1.42
SSX2IPQ9Y2D8 AC092651.1-201ENST00000426110 312 ntBASIC6.2□□□□□ -1.42
SSX2IPQ9Y2D8 AL590399.2-201ENST00000427536 309 ntBASIC6.2□□□□□ -1.42
SSX2IPQ9Y2D8 MTCO1P45-201ENST00000431457 267 ntBASIC6.2□□□□□ -1.42
SSX2IPQ9Y2D8 MTND1P26-201ENST00000440488 538 ntBASIC6.2□□□□□ -1.42
SSX2IPQ9Y2D8 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC6.2□□□□□ -1.42
SSX2IPQ9Y2D8 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SSX2IPQ9Y2D8 AL445687.2-201ENST00000458156 728 ntBASIC6.2□□□□□ -1.42
SSX2IPQ9Y2D8 AC090602.1-201ENST00000469695 252 ntBASIC6.2□□□□□ -1.42
SSX2IPQ9Y2D8 OR2AO1P-201ENST00000476497 403 ntBASIC6.2□□□□□ -1.42
SSX2IPQ9Y2D8 OARD1-211ENST00000480585 829 ntTSL 3 BASIC6.2□□□□□ -1.42
SSX2IPQ9Y2D8 AC074255.1-201ENST00000511259 501 ntBASIC6.2□□□□□ -1.42
SSX2IPQ9Y2D8 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC6.2□□□□□ -1.42
SSX2IPQ9Y2D8 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC6.2□□□□□ -1.42
SSX2IPQ9Y2D8 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC6.2□□□□□ -1.42
SSX2IPQ9Y2D8 RNU6-334P-201ENST00000517072 102 ntBASIC6.2□□□□□ -1.42
SSX2IPQ9Y2D8 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC6.2□□□□□ -1.42
SSX2IPQ9Y2D8 MINCR-206ENST00000524335 499 ntTSL 2 BASIC6.2□□□□□ -1.42
SSX2IPQ9Y2D8 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC6.2□□□□□ -1.42
SSX2IPQ9Y2D8 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 212.4 ms