Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC8.02□□□□□ -1.12
VPS9D1Q9Y2B5 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC8.02□□□□□ -1.12
VPS9D1Q9Y2B5 MYO6-207ENST00000615563 4026 ntTSL 1 (best) BASIC8.02□□□□□ -1.12
VPS9D1Q9Y2B5 CDH6-201ENST00000265071 8476 ntAPPRIS P1 TSL 2 BASIC8.02□□□□□ -1.13
VPS9D1Q9Y2B5 AL136985.3-201ENST00000637377 2219 ntTSL 5 BASIC8.02□□□□□ -1.13
VPS9D1Q9Y2B5 GAPVD1-204ENST00000394083 4747 ntTSL 5 BASIC8.02□□□□□ -1.13
VPS9D1Q9Y2B5 BBS12-203ENST00000542236 3431 ntAPPRIS P1 TSL 2 BASIC8.02□□□□□ -1.13
VPS9D1Q9Y2B5 ADGRF2-201ENST00000296862 2127 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
VPS9D1Q9Y2B5 CD46-208ENST00000367042 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
VPS9D1Q9Y2B5 CFAP61-205ENST00000377306 2017 ntTSL 5 BASIC8.02□□□□□ -1.13
VPS9D1Q9Y2B5 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC8.02□□□□□ -1.13
VPS9D1Q9Y2B5 SAXO1-203ENST00000542071 1923 ntAPPRIS ALT2 TSL 3 BASIC8.02□□□□□ -1.13
VPS9D1Q9Y2B5 SORBS1-204ENST00000361941 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
VPS9D1Q9Y2B5 AL442128.2-201ENST00000620246 1824 ntBASIC8.02□□□□□ -1.13
VPS9D1Q9Y2B5 LHFPL3-AS2-202ENST00000631061 1832 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
VPS9D1Q9Y2B5 Y_RNA.373-201ENST00000365600 103 ntBASIC8.02□□□□□ -1.13
VPS9D1Q9Y2B5 RNA5SP256-201ENST00000390978 113 ntBASIC8.02□□□□□ -1.13
VPS9D1Q9Y2B5 SOD2P1-201ENST00000396543 562 ntBASIC8.02□□□□□ -1.13
VPS9D1Q9Y2B5 AL445529.1-201ENST00000398713 389 ntBASIC8.02□□□□□ -1.13
VPS9D1Q9Y2B5 SNORA11C-201ENST00000408532 129 ntBASIC8.02□□□□□ -1.13
VPS9D1Q9Y2B5 RNA5SP265-201ENST00000411023 111 ntBASIC8.02□□□□□ -1.13
VPS9D1Q9Y2B5 AC099560.1-201ENST00000412811 500 ntTSL 4 BASIC8.02□□□□□ -1.13
VPS9D1Q9Y2B5 AL713965.1-201ENST00000421166 230 ntTSL 5 BASIC8.02□□□□□ -1.13
VPS9D1Q9Y2B5 COX6CP17-201ENST00000421389 185 ntBASIC8.02□□□□□ -1.13
VPS9D1Q9Y2B5 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC8.02□□□□□ -1.13
VPS9D1Q9Y2B5 AL158073.1-201ENST00000426848 1104 ntBASIC8.02□□□□□ -1.13
VPS9D1Q9Y2B5 HMGB1P9-201ENST00000429856 646 ntBASIC8.02□□□□□ -1.13
VPS9D1Q9Y2B5 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC8.02□□□□□ -1.13
VPS9D1Q9Y2B5 AL606534.2-201ENST00000436756 624 ntTSL 5 BASIC8.02□□□□□ -1.13
VPS9D1Q9Y2B5 GHRL-207ENST00000437422 443 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
VPS9D1Q9Y2B5 AC009237.4-201ENST00000441078 238 ntBASIC8.02□□□□□ -1.13
VPS9D1Q9Y2B5 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC8.02□□□□□ -1.13
VPS9D1Q9Y2B5 AC002553.2-201ENST00000453217 340 ntBASIC8.02□□□□□ -1.13
VPS9D1Q9Y2B5 Z82173.1-201ENST00000453924 484 ntTSL 3 BASIC8.02□□□□□ -1.13
VPS9D1Q9Y2B5 TUBB4BP2-201ENST00000454125 798 ntBASIC8.02□□□□□ -1.13
VPS9D1Q9Y2B5 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC8.02□□□□□ -1.13
VPS9D1Q9Y2B5 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC8.02□□□□□ -1.13
VPS9D1Q9Y2B5 RN7SL403P-201ENST00000481783 305 ntBASIC8.02□□□□□ -1.13
VPS9D1Q9Y2B5 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
VPS9D1Q9Y2B5 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC8.02□□□□□ -1.13
VPS9D1Q9Y2B5 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC8.02□□□□□ -1.13
VPS9D1Q9Y2B5 RN7SKP190-201ENST00000516079 286 ntBASIC8.02□□□□□ -1.13
VPS9D1Q9Y2B5 RPS20-202ENST00000518875 671 ntTSL 2 BASIC8.02□□□□□ -1.13
VPS9D1Q9Y2B5 RPL7P20-201ENST00000520308 745 ntBASIC8.02□□□□□ -1.13
VPS9D1Q9Y2B5 PPP1R1AP1-201ENST00000525622 425 ntBASIC8.02□□□□□ -1.13
VPS9D1Q9Y2B5 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC8.02□□□□□ -1.13
VPS9D1Q9Y2B5 AP001994.1-201ENST00000527539 826 ntBASIC8.02□□□□□ -1.13
VPS9D1Q9Y2B5 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC8.02□□□□□ -1.13
VPS9D1Q9Y2B5 OR4R1P-201ENST00000529879 463 ntBASIC8.02□□□□□ -1.13
VPS9D1Q9Y2B5 AC023157.2-201ENST00000540596 141 ntBASIC8.02□□□□□ -1.13
VPS9D1Q9Y2B5 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC8.02□□□□□ -1.13
VPS9D1Q9Y2B5 PLA2G1B-203ENST00000549767 562 ntTSL 2 BASIC8.02□□□□□ -1.13
VPS9D1Q9Y2B5 LINC01397-201ENST00000554808 579 ntTSL 4 BASIC8.02□□□□□ -1.13
VPS9D1Q9Y2B5 CYP4A26P-201ENST00000563017 196 ntBASIC8.02□□□□□ -1.13
VPS9D1Q9Y2B5 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC8.02□□□□□ -1.13
VPS9D1Q9Y2B5 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
VPS9D1Q9Y2B5 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
VPS9D1Q9Y2B5 AL451085.1-201ENST00000604546 690 ntBASIC8.02□□□□□ -1.13
VPS9D1Q9Y2B5 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC8.02□□□□□ -1.13
VPS9D1Q9Y2B5 AL606760.4-201ENST00000617613 718 ntBASIC8.02□□□□□ -1.13
VPS9D1Q9Y2B5 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
VPS9D1Q9Y2B5 ATM-230ENST00000640388 578 ntTSL 5 BASIC8.02□□□□□ -1.13
VPS9D1Q9Y2B5 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
VPS9D1Q9Y2B5 GTF2H1-210ENST00000530496 1700 ntTSL 2 BASIC8.02□□□□□ -1.13
VPS9D1Q9Y2B5 AC131649.2-201ENST00000624925 4439 ntBASIC8.02□□□□□ -1.13
VPS9D1Q9Y2B5 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC8.02□□□□□ -1.13
VPS9D1Q9Y2B5 LINC00663-203ENST00000586885 2546 ntBASIC8.02□□□□□ -1.13
VPS9D1Q9Y2B5 UTY-210ENST00000538878 6574 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
VPS9D1Q9Y2B5 DDX18P6-201ENST00000450119 1997 ntBASIC8.02□□□□□ -1.13
VPS9D1Q9Y2B5 KCNH7-202ENST00000332142 4113 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
VPS9D1Q9Y2B5 LINC01268-201ENST00000434296 2755 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
VPS9D1Q9Y2B5 KLHL8-202ENST00000425278 4049 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
VPS9D1Q9Y2B5 CLEC2D-203ENST00000290855 5279 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
VPS9D1Q9Y2B5 OSBPL9-202ENST00000371714 3352 ntAPPRIS ALT1 TSL 2 BASIC8.02□□□□□ -1.13
VPS9D1Q9Y2B5 AC011447.6-201ENST00000623510 2598 ntBASIC8.02□□□□□ -1.13
VPS9D1Q9Y2B5 ANKRD36BP1-201ENST00000358576 1779 ntBASIC8.02□□□□□ -1.13
VPS9D1Q9Y2B5 AURKA-203ENST00000371356 2112 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
VPS9D1Q9Y2B5 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
VPS9D1Q9Y2B5 HBP1-208ENST00000468410 2704 ntAPPRIS P1 TSL 2 BASIC8.01□□□□□ -1.13
VPS9D1Q9Y2B5 GCSAM-201ENST00000308910 3336 ntAPPRIS P3 TSL 1 (best) BASIC8.01□□□□□ -1.13
VPS9D1Q9Y2B5 NFRKB-203ENST00000524794 4351 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
VPS9D1Q9Y2B5 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
VPS9D1Q9Y2B5 MYT1L-AS1-202ENST00000448106 3230 ntTSL 2 BASIC8.01□□□□□ -1.13
VPS9D1Q9Y2B5 NF1P2-201ENST00000556855 2505 ntBASIC8.01□□□□□ -1.13
VPS9D1Q9Y2B5 RNF24-203ENST00000432261 3149 ntTSL 5 BASIC8.01□□□□□ -1.13
VPS9D1Q9Y2B5 FMO10P-201ENST00000455032 1493 ntBASIC8.01□□□□□ -1.13
VPS9D1Q9Y2B5 RECQL5-203ENST00000420326 3710 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
VPS9D1Q9Y2B5 ZNF878-201ENST00000547628 1734 ntAPPRIS P1 TSL 3 BASIC8.01□□□□□ -1.13
VPS9D1Q9Y2B5 OR9M1P-202ENST00000641564 3163 ntBASIC8.01□□□□□ -1.13
VPS9D1Q9Y2B5 HYDIN2-203ENST00000614586 13885 ntBASIC8.01□□□□□ -1.13
VPS9D1Q9Y2B5 ATP5A1P4-201ENST00000556888 1605 ntBASIC8.01□□□□□ -1.13
VPS9D1Q9Y2B5 ART4-201ENST00000228936 5129 ntAPPRIS P2 TSL 1 (best) BASIC8.01□□□□□ -1.13
VPS9D1Q9Y2B5 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC8.01□□□□□ -1.13
VPS9D1Q9Y2B5 OR10G4-201ENST00000320891 936 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
VPS9D1Q9Y2B5 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC8.01□□□□□ -1.13
VPS9D1Q9Y2B5 OR10A3-201ENST00000360759 1061 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
VPS9D1Q9Y2B5 RNU6-996P-201ENST00000365438 107 ntBASIC8.01□□□□□ -1.13
VPS9D1Q9Y2B5 AC073842.1-201ENST00000376482 342 ntTSL 5 BASIC8.01□□□□□ -1.13
VPS9D1Q9Y2B5 TRAJ24-201ENST00000390513 63 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
VPS9D1Q9Y2B5 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms