Protein–RNA interactions for Protein: Q9UPW6

SATB2, DNA-binding protein SATB2, humanhuman

Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2Q9UPW6 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.47□□□□□ -1.53
SATB2Q9UPW6 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SATB2Q9UPW6 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SATB2Q9UPW6 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.53
SATB2Q9UPW6 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
SATB2Q9UPW6 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
SATB2Q9UPW6 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.53
SATB2Q9UPW6 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.53
SATB2Q9UPW6 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
SATB2Q9UPW6 AP001029.2-203ENST00000589795 4910 ntBASIC5.46□□□□□ -1.53
SATB2Q9UPW6 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
SATB2Q9UPW6 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SATB2Q9UPW6 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SATB2Q9UPW6 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SATB2Q9UPW6 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.54
SATB2Q9UPW6 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
SATB2Q9UPW6 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SATB2Q9UPW6 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
SATB2Q9UPW6 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
SATB2Q9UPW6 RPL23AP27-201ENST00000415161 451 ntBASIC5.46□□□□□ -1.54
SATB2Q9UPW6 SLC35E1P1-201ENST00000419313 864 ntBASIC5.46□□□□□ -1.54
SATB2Q9UPW6 AC019205.1-201ENST00000421830 730 ntBASIC5.46□□□□□ -1.54
SATB2Q9UPW6 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.46□□□□□ -1.54
SATB2Q9UPW6 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.46□□□□□ -1.54
SATB2Q9UPW6 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC5.46□□□□□ -1.54
SATB2Q9UPW6 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.46□□□□□ -1.54
SATB2Q9UPW6 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.46□□□□□ -1.54
SATB2Q9UPW6 RPL12P3-201ENST00000440080 396 ntBASIC5.46□□□□□ -1.54
SATB2Q9UPW6 OR52Y1P-201ENST00000452418 828 ntBASIC5.46□□□□□ -1.54
SATB2Q9UPW6 AP000547.1-201ENST00000454360 617 ntBASIC5.46□□□□□ -1.54
SATB2Q9UPW6 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
SATB2Q9UPW6 AC079841.1-201ENST00000481228 950 ntBASIC5.46□□□□□ -1.54
SATB2Q9UPW6 AC004453.1-201ENST00000487895 408 ntBASIC5.46□□□□□ -1.54
SATB2Q9UPW6 RPL15P21-201ENST00000495592 567 ntBASIC5.46□□□□□ -1.54
SATB2Q9UPW6 RN7SL808P-201ENST00000496066 299 ntBASIC5.46□□□□□ -1.54
SATB2Q9UPW6 AC090638.1-201ENST00000498296 909 ntBASIC5.46□□□□□ -1.54
SATB2Q9UPW6 ST13P12-201ENST00000508958 1094 ntBASIC5.46□□□□□ -1.54
SATB2Q9UPW6 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.46□□□□□ -1.54
SATB2Q9UPW6 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.46□□□□□ -1.54
SATB2Q9UPW6 AC078899.1-201ENST00000521432 1185 ntBASIC5.46□□□□□ -1.54
SATB2Q9UPW6 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.46□□□□□ -1.54
SATB2Q9UPW6 OR4A46P-201ENST00000527255 933 ntBASIC5.46□□□□□ -1.54
SATB2Q9UPW6 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC5.46□□□□□ -1.54
SATB2Q9UPW6 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.46□□□□□ -1.54
SATB2Q9UPW6 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.46□□□□□ -1.54
SATB2Q9UPW6 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SATB2Q9UPW6 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC5.46□□□□□ -1.54
SATB2Q9UPW6 AL049779.2-201ENST00000553847 315 ntBASIC5.46□□□□□ -1.54
SATB2Q9UPW6 AC096996.1-201ENST00000563813 325 ntBASIC5.46□□□□□ -1.54
SATB2Q9UPW6 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.46□□□□□ -1.54
SATB2Q9UPW6 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.46□□□□□ -1.54
SATB2Q9UPW6 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.46□□□□□ -1.54
SATB2Q9UPW6 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.46□□□□□ -1.54
SATB2Q9UPW6 NANOGP3-201ENST00000605855 286 ntBASIC5.46□□□□□ -1.54
SATB2Q9UPW6 AC096586.2-201ENST00000610260 441 ntBASIC5.46□□□□□ -1.54
SATB2Q9UPW6 MIR6748-201ENST00000610433 71 ntBASIC5.46□□□□□ -1.54
SATB2Q9UPW6 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.46□□□□□ -1.54
SATB2Q9UPW6 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC5.46□□□□□ -1.54
SATB2Q9UPW6 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.46□□□□□ -1.54
SATB2Q9UPW6 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.46□□□□□ -1.54
SATB2Q9UPW6 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SATB2Q9UPW6 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SATB2Q9UPW6 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SATB2Q9UPW6 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.46□□□□□ -1.54
SATB2Q9UPW6 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SATB2Q9UPW6 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
SATB2Q9UPW6 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.46□□□□□ -1.54
SATB2Q9UPW6 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
SATB2Q9UPW6 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.46□□□□□ -1.54
SATB2Q9UPW6 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
SATB2Q9UPW6 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SATB2Q9UPW6 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SATB2Q9UPW6 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.45□□□□□ -1.54
SATB2Q9UPW6 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
SATB2Q9UPW6 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
SATB2Q9UPW6 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
SATB2Q9UPW6 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
SATB2Q9UPW6 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SATB2Q9UPW6 RN7SKP28-201ENST00000364770 305 ntBASIC5.45□□□□□ -1.54
SATB2Q9UPW6 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
SATB2Q9UPW6 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
SATB2Q9UPW6 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.45□□□□□ -1.54
SATB2Q9UPW6 Y_RNA.625-201ENST00000411256 107 ntBASIC5.45□□□□□ -1.54
SATB2Q9UPW6 NPM1P40-201ENST00000412758 733 ntBASIC5.45□□□□□ -1.54
SATB2Q9UPW6 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SATB2Q9UPW6 HMGB1P32-201ENST00000425971 565 ntBASIC5.45□□□□□ -1.54
SATB2Q9UPW6 CRIP1P1-201ENST00000427567 185 ntBASIC5.45□□□□□ -1.54
SATB2Q9UPW6 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.45□□□□□ -1.54
SATB2Q9UPW6 CYCSP6-201ENST00000434498 302 ntBASIC5.45□□□□□ -1.54
SATB2Q9UPW6 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SATB2Q9UPW6 AC015983.1-201ENST00000441577 373 ntBASIC5.45□□□□□ -1.54
SATB2Q9UPW6 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC5.45□□□□□ -1.54
SATB2Q9UPW6 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
SATB2Q9UPW6 AL450023.1-201ENST00000450868 751 ntBASIC5.45□□□□□ -1.54
SATB2Q9UPW6 MTCYBP14-201ENST00000457471 715 ntBASIC5.45□□□□□ -1.54
SATB2Q9UPW6 RNU1-88P-201ENST00000459274 128 ntBASIC5.45□□□□□ -1.54
SATB2Q9UPW6 AP000942.1-201ENST00000463969 747 ntBASIC5.45□□□□□ -1.54
SATB2Q9UPW6 TRBV8-1-201ENST00000481590 279 ntBASIC5.45□□□□□ -1.54
SATB2Q9UPW6 NPM1P29-201ENST00000483112 803 ntBASIC5.45□□□□□ -1.54
SATB2Q9UPW6 MTND3P6-201ENST00000485242 339 ntBASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms