Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 LINC00672-201ENST00000583195 3692 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
LHX6Q9UPM6 UBE2V1-223ENST00000617119 2432 ntTSL 4 BASIC7.98□□□□□ -1.13
LHX6Q9UPM6 TBC1D31-202ENST00000327098 2985 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
LHX6Q9UPM6 GNPAT-201ENST00000366647 2643 ntAPPRIS P2 TSL 1 (best) BASIC7.98□□□□□ -1.13
LHX6Q9UPM6 CLIP1-218ENST00000545889 4633 ntTSL 5 BASIC7.98□□□□□ -1.13
LHX6Q9UPM6 ADGRF4-201ENST00000283303 3162 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
LHX6Q9UPM6 RBM5-201ENST00000347869 3188 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
LHX6Q9UPM6 VPS11-206ENST00000614944 3388 ntTSL 2 BASIC7.97□□□□□ -1.13
LHX6Q9UPM6 HM13-224ENST00000498035 3932 ntTSL 2 BASIC7.97□□□□□ -1.13
LHX6Q9UPM6 CLUHP3-206ENST00000562354 4117 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
LHX6Q9UPM6 NOS1-203ENST00000344089 4340 ntTSL 5 BASIC7.97□□□□□ -1.13
LHX6Q9UPM6 BMPR1APS1-201ENST00000403332 1598 ntBASIC7.97□□□□□ -1.13
LHX6Q9UPM6 CNR1-204ENST00000428600 1550 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
LHX6Q9UPM6 CR1-206ENST00000400960 6959 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
LHX6Q9UPM6 KCNH5-204ENST00000420622 2711 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
LHX6Q9UPM6 AC121333.1-201ENST00000567488 2709 ntBASIC7.97□□□□□ -1.13
LHX6Q9UPM6 ERC1-203ENST00000360905 5789 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
LHX6Q9UPM6 EMC1-202ENST00000375208 4084 ntTSL 2 BASIC7.97□□□□□ -1.13
LHX6Q9UPM6 TBC1D8B-206ENST00000481617 4098 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
LHX6Q9UPM6 COL6A6-201ENST00000358511 9581 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
LHX6Q9UPM6 AMPD1-203ENST00000520113 2375 ntAPPRIS P3 TSL 1 (best) BASIC7.97□□□□□ -1.13
LHX6Q9UPM6 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
LHX6Q9UPM6 FGF1-204ENST00000378046 2582 ntAPPRIS P1 TSL 3 BASIC7.97□□□□□ -1.13
LHX6Q9UPM6 FAM49A-201ENST00000381323 4670 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
LHX6Q9UPM6 CEP128-209ENST00000555265 4662 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
LHX6Q9UPM6 CNTN4-AS1-201ENST00000442749 1640 ntTSL 3 BASIC7.97□□□□□ -1.13
LHX6Q9UPM6 AC009948.1-205ENST00000453026 2007 ntTSL 3 BASIC7.97□□□□□ -1.13
LHX6Q9UPM6 FAH-204ENST00000539156 3427 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
LHX6Q9UPM6 SCGB1A1-201ENST00000278282 441 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
LHX6Q9UPM6 OR10T2-201ENST00000334438 945 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
LHX6Q9UPM6 OR8B4-201ENST00000356130 990 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
LHX6Q9UPM6 RNU6-1252P-201ENST00000363054 104 ntBASIC7.97□□□□□ -1.13
LHX6Q9UPM6 SMCP-201ENST00000368765 775 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
LHX6Q9UPM6 AMELY-202ENST00000383036 621 ntTSL 5 BASIC7.97□□□□□ -1.13
LHX6Q9UPM6 RNU6-1027P-201ENST00000383998 107 ntBASIC7.97□□□□□ -1.13
LHX6Q9UPM6 Y_RNA.424-201ENST00000384063 103 ntBASIC7.97□□□□□ -1.13
LHX6Q9UPM6 TRAV12-1-201ENST00000390433 340 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
LHX6Q9UPM6 AL359715.1-201ENST00000404330 555 ntBASIC7.97□□□□□ -1.13
LHX6Q9UPM6 LINC01384-201ENST00000422494 659 ntTSL 3 BASIC7.97□□□□□ -1.13
LHX6Q9UPM6 AC092832.1-201ENST00000422934 400 ntBASIC7.97□□□□□ -1.13
LHX6Q9UPM6 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC7.97□□□□□ -1.13
LHX6Q9UPM6 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC7.97□□□□□ -1.13
LHX6Q9UPM6 RPL21P2-201ENST00000440049 481 ntBASIC7.97□□□□□ -1.13
LHX6Q9UPM6 AC239800.1-201ENST00000442049 719 ntBASIC7.97□□□□□ -1.13
LHX6Q9UPM6 AC242426.2-201ENST00000446956 795 ntBASIC7.97□□□□□ -1.13
LHX6Q9UPM6 RPS27AP15-201ENST00000447672 466 ntBASIC7.97□□□□□ -1.13
LHX6Q9UPM6 AC119424.1-201ENST00000472513 350 ntTSL 5 BASIC7.97□□□□□ -1.13
LHX6Q9UPM6 RPL7P43-201ENST00000478876 753 ntBASIC7.97□□□□□ -1.13
LHX6Q9UPM6 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
LHX6Q9UPM6 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
LHX6Q9UPM6 RNU6-470P-201ENST00000515954 104 ntBASIC7.97□□□□□ -1.13
LHX6Q9UPM6 RN7SKP92-201ENST00000517266 244 ntBASIC7.97□□□□□ -1.13
LHX6Q9UPM6 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC7.97□□□□□ -1.13
LHX6Q9UPM6 AC107934.1-201ENST00000522215 217 ntBASIC7.97□□□□□ -1.13
LHX6Q9UPM6 AP000763.2-201ENST00000540641 163 ntBASIC7.97□□□□□ -1.13
LHX6Q9UPM6 PTCSC3-201ENST00000556013 571 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
LHX6Q9UPM6 LINC01588-211ENST00000556434 892 ntTSL 5 BASIC7.97□□□□□ -1.13
LHX6Q9UPM6 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC7.97□□□□□ -1.13
LHX6Q9UPM6 ZEB2-AS1-206ENST00000602006 572 ntTSL 5 BASIC7.97□□□□□ -1.13
LHX6Q9UPM6 AC092447.9-201ENST00000603395 144 ntBASIC7.97□□□□□ -1.13
LHX6Q9UPM6 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC7.97□□□□□ -1.13
LHX6Q9UPM6 LINC02391-201ENST00000615716 800 ntTSL 5 BASIC7.97□□□□□ -1.13
LHX6Q9UPM6 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC7.97□□□□□ -1.13
LHX6Q9UPM6 PISRT1.1-201ENST00000616930 107 ntBASIC7.97□□□□□ -1.13
LHX6Q9UPM6 AP003789.1-201ENST00000617737 605 ntBASIC7.97□□□□□ -1.13
LHX6Q9UPM6 MAPK10-232ENST00000515400 2076 ntTSL 5 BASIC7.97□□□□□ -1.13
LHX6Q9UPM6 USP30-203ENST00000392784 2483 ntTSL 2 BASIC7.97□□□□□ -1.13
LHX6Q9UPM6 COLGALT2-203ENST00000367521 4723 ntTSL 2 BASIC7.97□□□□□ -1.13
LHX6Q9UPM6 SLF2-203ENST00000370271 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
LHX6Q9UPM6 AEBP2-202ENST00000360995 2533 ntAPPRIS ALT2 TSL 2 BASIC7.97□□□□□ -1.13
LHX6Q9UPM6 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC7.97□□□□□ -1.13
LHX6Q9UPM6 AURKA-205ENST00000395911 2145 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
LHX6Q9UPM6 SLC17A3-203ENST00000361703 1543 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
LHX6Q9UPM6 STAT2-202ENST00000418572 1548 ntTSL 2 BASIC7.97□□□□□ -1.13
LHX6Q9UPM6 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC7.97□□□□□ -1.13
LHX6Q9UPM6 NFIB-218ENST00000636432 1953 ntTSL 5 BASIC7.97□□□□□ -1.13
LHX6Q9UPM6 AC090017.1-201ENST00000548612 1779 ntBASIC7.97□□□□□ -1.13
LHX6Q9UPM6 NUSAP1-210ENST00000560177 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
LHX6Q9UPM6 ZNFX1-204ENST00000396105 7371 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
LHX6Q9UPM6 FBXL13-202ENST00000379305 2478 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
LHX6Q9UPM6 GALR1-201ENST00000299727 10044 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
LHX6Q9UPM6 ZSCAN9-204ENST00000527436 2062 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
LHX6Q9UPM6 AC046144.1-201ENST00000478559 1853 ntBASIC7.96□□□□□ -1.13
LHX6Q9UPM6 ZNF844-201ENST00000439326 6620 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
LHX6Q9UPM6 AL049833.3-201ENST00000623920 3738 ntBASIC7.96□□□□□ -1.13
LHX6Q9UPM6 CLCN3P1-202ENST00000609203 1944 ntTSL 2 BASIC7.96□□□□□ -1.13
LHX6Q9UPM6 C18orf32-203ENST00000613385 5395 ntAPPRIS P1 TSL 2 BASIC7.96□□□□□ -1.14
LHX6Q9UPM6 CCT5-213ENST00000515390 1728 ntTSL 2 BASIC7.96□□□□□ -1.14
LHX6Q9UPM6 ZNF562-208ENST00000590155 1712 ntAPPRIS ALT2 TSL 2 BASIC7.96□□□□□ -1.14
LHX6Q9UPM6 FAM126A-202ENST00000409923 3130 ntTSL 5 BASIC7.96□□□□□ -1.14
LHX6Q9UPM6 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
LHX6Q9UPM6 Y_RNA.167-201ENST00000363735 109 ntBASIC7.96□□□□□ -1.14
LHX6Q9UPM6 Y_RNA.506-201ENST00000384494 102 ntBASIC7.96□□□□□ -1.14
LHX6Q9UPM6 OR2L6P-201ENST00000416377 940 ntBASIC7.96□□□□□ -1.14
LHX6Q9UPM6 AC048351.1-201ENST00000420064 602 ntBASIC7.96□□□□□ -1.14
LHX6Q9UPM6 AC007679.2-201ENST00000422116 781 ntTSL 3 BASIC7.96□□□□□ -1.14
LHX6Q9UPM6 LINC00851-201ENST00000423033 727 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
LHX6Q9UPM6 RPS10P21-201ENST00000430654 475 ntBASIC7.96□□□□□ -1.14
LHX6Q9UPM6 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC7.96□□□□□ -1.14
LHX6Q9UPM6 MIATNB-204ENST00000437071 1006 ntTSL 3 BASIC7.96□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms