Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
GAFA1Q96PS6 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
GAFA1Q96PS6 SNURFL-201ENST00000309296 343 ntBASIC4.25□□□□□ -1.73
GAFA1Q96PS6 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
GAFA1Q96PS6 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
GAFA1Q96PS6 U8.4-201ENST00000363626 134 ntBASIC4.25□□□□□ -1.73
GAFA1Q96PS6 AL353625.1-202ENST00000366273 571 ntBASIC4.25□□□□□ -1.73
GAFA1Q96PS6 ACADSB-202ENST00000368869 1599 ntTSL 2 BASIC4.25□□□□□ -1.73
GAFA1Q96PS6 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC4.25□□□□□ -1.73
GAFA1Q96PS6 RNU1-106P-201ENST00000384382 164 ntBASIC4.25□□□□□ -1.73
GAFA1Q96PS6 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
GAFA1Q96PS6 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.25□□□□□ -1.73
GAFA1Q96PS6 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.25□□□□□ -1.73
GAFA1Q96PS6 DDX39BP1-205ENST00000422507 192 ntBASIC4.25□□□□□ -1.73
GAFA1Q96PS6 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC4.25□□□□□ -1.73
GAFA1Q96PS6 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.25□□□□□ -1.73
GAFA1Q96PS6 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC4.25□□□□□ -1.73
GAFA1Q96PS6 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC4.25□□□□□ -1.73
GAFA1Q96PS6 MYL12BP2-201ENST00000503948 512 ntBASIC4.25□□□□□ -1.73
GAFA1Q96PS6 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.25□□□□□ -1.73
GAFA1Q96PS6 RN7SKP260-201ENST00000516907 149 ntBASIC4.25□□□□□ -1.73
GAFA1Q96PS6 NOP10-202ENST00000557912 436 ntTSL 2 BASIC4.25□□□□□ -1.73
GAFA1Q96PS6 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.25□□□□□ -1.73
GAFA1Q96PS6 MIR3691-201ENST00000578066 90 ntBASIC4.25□□□□□ -1.73
GAFA1Q96PS6 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC4.25□□□□□ -1.73
GAFA1Q96PS6 AC092944.2-201ENST00000605443 889 ntBASIC4.25□□□□□ -1.73
GAFA1Q96PS6 AL121612.2-201ENST00000612261 482 ntBASIC4.25□□□□□ -1.73
GAFA1Q96PS6 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC4.25□□□□□ -1.73
GAFA1Q96PS6 TEX41-254ENST00000626394 423 ntTSL 5 BASIC4.25□□□□□ -1.73
GAFA1Q96PS6 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
GAFA1Q96PS6 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
GAFA1Q96PS6 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.25□□□□□ -1.73
GAFA1Q96PS6 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.25□□□□□ -1.73
GAFA1Q96PS6 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC4.25□□□□□ -1.73
GAFA1Q96PS6 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.25□□□□□ -1.73
GAFA1Q96PS6 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
GAFA1Q96PS6 AC002525.1-201ENST00000624392 1622 ntBASIC4.24□□□□□ -1.73
GAFA1Q96PS6 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
GAFA1Q96PS6 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
GAFA1Q96PS6 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC4.24□□□□□ -1.73
GAFA1Q96PS6 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
GAFA1Q96PS6 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
GAFA1Q96PS6 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
GAFA1Q96PS6 AC078880.4-201ENST00000617627 1749 ntBASIC4.24□□□□□ -1.73
GAFA1Q96PS6 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.24□□□□□ -1.73
GAFA1Q96PS6 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.24□□□□□ -1.73
GAFA1Q96PS6 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC4.24□□□□□ -1.73
GAFA1Q96PS6 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.24□□□□□ -1.73
GAFA1Q96PS6 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
GAFA1Q96PS6 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC4.24□□□□□ -1.73
GAFA1Q96PS6 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
GAFA1Q96PS6 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
GAFA1Q96PS6 U3.32-201ENST00000408116 212 ntBASIC4.24□□□□□ -1.73
GAFA1Q96PS6 RN7SKP16-201ENST00000410180 299 ntBASIC4.24□□□□□ -1.73
GAFA1Q96PS6 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC4.24□□□□□ -1.73
GAFA1Q96PS6 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
GAFA1Q96PS6 COX6CP13-201ENST00000428703 226 ntBASIC4.24□□□□□ -1.73
GAFA1Q96PS6 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.24□□□□□ -1.73
GAFA1Q96PS6 BX323845.1-201ENST00000432417 179 ntBASIC4.24□□□□□ -1.73
GAFA1Q96PS6 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC4.24□□□□□ -1.73
GAFA1Q96PS6 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC4.24□□□□□ -1.73
GAFA1Q96PS6 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.24□□□□□ -1.73
GAFA1Q96PS6 KNOP1P3-201ENST00000446933 426 ntBASIC4.24□□□□□ -1.73
GAFA1Q96PS6 AC110749.1-201ENST00000462007 357 ntBASIC4.24□□□□□ -1.73
GAFA1Q96PS6 AC090114.3-201ENST00000479267 829 ntBASIC4.24□□□□□ -1.73
GAFA1Q96PS6 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.24□□□□□ -1.73
GAFA1Q96PS6 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC4.24□□□□□ -1.73
GAFA1Q96PS6 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC4.24□□□□□ -1.73
GAFA1Q96PS6 OR10G5P-201ENST00000532733 358 ntBASIC4.24□□□□□ -1.73
GAFA1Q96PS6 AC092490.3-201ENST00000545370 572 ntBASIC4.24□□□□□ -1.73
GAFA1Q96PS6 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC4.24□□□□□ -1.73
GAFA1Q96PS6 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC4.24□□□□□ -1.73
GAFA1Q96PS6 MYLK-221ENST00000583087 678 ntTSL 4 BASIC4.24□□□□□ -1.73
GAFA1Q96PS6 OR7E18P-201ENST00000592589 702 ntBASIC4.24□□□□□ -1.73
GAFA1Q96PS6 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC4.24□□□□□ -1.73
GAFA1Q96PS6 AC006116.3-201ENST00000592968 361 ntBASIC4.24□□□□□ -1.73
GAFA1Q96PS6 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC4.24□□□□□ -1.73
GAFA1Q96PS6 AC018695.5-201ENST00000605872 315 ntBASIC4.24□□□□□ -1.73
GAFA1Q96PS6 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.24□□□□□ -1.73
GAFA1Q96PS6 LINC01739-205ENST00000641890 573 ntBASIC4.24□□□□□ -1.73
GAFA1Q96PS6 SAMMSON-227ENST00000642114 1199 ntBASIC4.24□□□□□ -1.73
GAFA1Q96PS6 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
GAFA1Q96PS6 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
GAFA1Q96PS6 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
GAFA1Q96PS6 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
GAFA1Q96PS6 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.24□□□□□ -1.73
GAFA1Q96PS6 AC092376.2-201ENST00000622621 4116 ntBASIC4.24□□□□□ -1.73
GAFA1Q96PS6 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
GAFA1Q96PS6 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
GAFA1Q96PS6 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.24□□□□□ -1.73
GAFA1Q96PS6 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.23□□□□□ -1.73
GAFA1Q96PS6 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
GAFA1Q96PS6 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
GAFA1Q96PS6 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.23□□□□□ -1.73
GAFA1Q96PS6 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
GAFA1Q96PS6 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.23□□□□□ -1.73
GAFA1Q96PS6 THAP12P4-201ENST00000528321 2266 ntBASIC4.23□□□□□ -1.73
GAFA1Q96PS6 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
GAFA1Q96PS6 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
GAFA1Q96PS6 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms