Protein–RNA interactions for Protein: Q96P20

NLRP3, NACHT, LRR and PYD domains-containing protein 3, humanhuman

Predictions only

Length 1,036 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLRP3Q96P20 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC8.14□□□□□ -1.11
NLRP3Q96P20 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC8.14□□□□□ -1.11
NLRP3Q96P20 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC8.14□□□□□ -1.11
NLRP3Q96P20 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC8.14□□□□□ -1.11
NLRP3Q96P20 MTHFD1P1-201ENST00000413059 2764 ntBASIC8.14□□□□□ -1.11
NLRP3Q96P20 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
NLRP3Q96P20 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
NLRP3Q96P20 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC8.14□□□□□ -1.11
NLRP3Q96P20 ELF2P3-201ENST00000445099 1506 ntBASIC8.13□□□□□ -1.11
NLRP3Q96P20 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC8.13□□□□□ -1.11
NLRP3Q96P20 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
NLRP3Q96P20 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
NLRP3Q96P20 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
NLRP3Q96P20 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
NLRP3Q96P20 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
NLRP3Q96P20 HSD17B4-212ENST00000509514 2314 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
NLRP3Q96P20 LRRC37A4P-201ENST00000579913 3243 ntTSL 2 BASIC8.13□□□□□ -1.11
NLRP3Q96P20 EEF1A1P12-201ENST00000443590 1346 ntBASIC8.13□□□□□ -1.11
NLRP3Q96P20 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
NLRP3Q96P20 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC8.13□□□□□ -1.11
NLRP3Q96P20 RNU6-1331P-201ENST00000363658 106 ntBASIC8.13□□□□□ -1.11
NLRP3Q96P20 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC8.13□□□□□ -1.11
NLRP3Q96P20 Y_RNA.554-201ENST00000384672 102 ntBASIC8.13□□□□□ -1.11
NLRP3Q96P20 MIR1204-201ENST00000408388 67 ntBASIC8.13□□□□□ -1.11
NLRP3Q96P20 MIR1277-201ENST00000408536 78 ntBASIC8.13□□□□□ -1.11
NLRP3Q96P20 TPMTP3-201ENST00000411928 735 ntBASIC8.13□□□□□ -1.11
NLRP3Q96P20 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC8.13□□□□□ -1.11
NLRP3Q96P20 HMGB1P31-201ENST00000437242 427 ntBASIC8.13□□□□□ -1.11
NLRP3Q96P20 ARAFP2-201ENST00000440565 559 ntBASIC8.13□□□□□ -1.11
NLRP3Q96P20 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC8.13□□□□□ -1.11
NLRP3Q96P20 MTND1P30-201ENST00000441241 901 ntBASIC8.13□□□□□ -1.11
NLRP3Q96P20 TRIM60P18-201ENST00000441518 828 ntBASIC8.13□□□□□ -1.11
NLRP3Q96P20 AL662791.1-201ENST00000441992 928 ntBASIC8.13□□□□□ -1.11
NLRP3Q96P20 AC010240.2-201ENST00000445363 1205 ntBASIC8.13□□□□□ -1.11
NLRP3Q96P20 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
NLRP3Q96P20 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC8.13□□□□□ -1.11
NLRP3Q96P20 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC8.13□□□□□ -1.11
NLRP3Q96P20 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC8.13□□□□□ -1.11
NLRP3Q96P20 AC011979.1-201ENST00000472300 483 ntBASIC8.13□□□□□ -1.11
NLRP3Q96P20 PFN2-209ENST00000481275 560 ntTSL 4 BASIC8.13□□□□□ -1.11
NLRP3Q96P20 OR11I1P-201ENST00000486033 954 ntBASIC8.13□□□□□ -1.11
NLRP3Q96P20 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
NLRP3Q96P20 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC8.13□□□□□ -1.11
NLRP3Q96P20 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC8.13□□□□□ -1.11
NLRP3Q96P20 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC8.13□□□□□ -1.11
NLRP3Q96P20 AC092709.1-201ENST00000521355 1045 ntBASIC8.13□□□□□ -1.11
NLRP3Q96P20 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC8.13□□□□□ -1.11
NLRP3Q96P20 AP000619.3-201ENST00000535634 1127 ntBASIC8.13□□□□□ -1.11
NLRP3Q96P20 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC8.13□□□□□ -1.11
NLRP3Q96P20 AC012464.1-201ENST00000550687 540 ntTSL 4 BASIC8.13□□□□□ -1.11
NLRP3Q96P20 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC8.13□□□□□ -1.11
NLRP3Q96P20 AC074029.1-201ENST00000552531 1044 ntBASIC8.13□□□□□ -1.11
NLRP3Q96P20 ZNF519P2-201ENST00000557032 169 ntBASIC8.13□□□□□ -1.11
NLRP3Q96P20 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC8.13□□□□□ -1.11
NLRP3Q96P20 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC8.13□□□□□ -1.11
NLRP3Q96P20 AC097505.1-201ENST00000610199 565 ntBASIC8.13□□□□□ -1.11
NLRP3Q96P20 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
NLRP3Q96P20 MIR4278-201ENST00000636094 69 ntBASIC8.13□□□□□ -1.11
NLRP3Q96P20 BMX-201ENST00000342014 2499 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
NLRP3Q96P20 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
NLRP3Q96P20 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC8.13□□□□□ -1.11
NLRP3Q96P20 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
NLRP3Q96P20 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC8.13□□□□□ -1.11
NLRP3Q96P20 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
NLRP3Q96P20 ZNF585B-203ENST00000527838 2732 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
NLRP3Q96P20 DLG2-201ENST00000280241 7730 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
NLRP3Q96P20 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC8.13□□□□□ -1.11
NLRP3Q96P20 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
NLRP3Q96P20 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
NLRP3Q96P20 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
NLRP3Q96P20 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
NLRP3Q96P20 DYNC1I2P1-201ENST00000435916 1838 ntBASIC8.13□□□□□ -1.11
NLRP3Q96P20 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
NLRP3Q96P20 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
NLRP3Q96P20 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
NLRP3Q96P20 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
NLRP3Q96P20 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
NLRP3Q96P20 GDPD4-202ENST00000376217 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
NLRP3Q96P20 ZNF521-214ENST00000584787 4327 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
NLRP3Q96P20 CR1-203ENST00000367051 7469 ntTSL 5 BASIC8.12□□□□□ -1.11
NLRP3Q96P20 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
NLRP3Q96P20 TRIM5-203ENST00000396847 3170 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
NLRP3Q96P20 ZFHX3-207ENST00000641206 16414 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
NLRP3Q96P20 FBXL13-201ENST00000313221 2744 ntTSL 2 BASIC8.12□□□□□ -1.11
NLRP3Q96P20 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC8.12□□□□□ -1.11
NLRP3Q96P20 SMG1-210ENST00000565224 2372 ntTSL 5 BASIC8.12□□□□□ -1.11
NLRP3Q96P20 NRCAM-205ENST00000413765 6406 ntTSL 2 BASIC8.12□□□□□ -1.11
NLRP3Q96P20 ADAM20P1-202ENST00000556964 3034 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
NLRP3Q96P20 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
NLRP3Q96P20 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
NLRP3Q96P20 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC8.12□□□□□ -1.11
NLRP3Q96P20 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC8.12□□□□□ -1.11
NLRP3Q96P20 BRD7P1-201ENST00000557705 1915 ntBASIC8.12□□□□□ -1.11
NLRP3Q96P20 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
NLRP3Q96P20 RNU6-181P-201ENST00000363225 107 ntBASIC8.12□□□□□ -1.11
NLRP3Q96P20 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC8.12□□□□□ -1.11
NLRP3Q96P20 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
NLRP3Q96P20 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
NLRP3Q96P20 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC8.12□□□□□ -1.11
NLRP3Q96P20 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC8.12□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms