Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
C9orf72Q96LT7 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
C9orf72Q96LT7 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.42□□□□□ -1.54
C9orf72Q96LT7 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
C9orf72Q96LT7 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.42□□□□□ -1.54
C9orf72Q96LT7 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
C9orf72Q96LT7 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
C9orf72Q96LT7 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
C9orf72Q96LT7 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
C9orf72Q96LT7 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.41□□□□□ -1.54
C9orf72Q96LT7 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
C9orf72Q96LT7 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
C9orf72Q96LT7 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC5.41□□□□□ -1.54
C9orf72Q96LT7 GNG5P5-201ENST00000420444 220 ntBASIC5.41□□□□□ -1.54
C9orf72Q96LT7 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.41□□□□□ -1.54
C9orf72Q96LT7 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
C9orf72Q96LT7 AC019185.1-201ENST00000442718 389 ntBASIC5.41□□□□□ -1.54
C9orf72Q96LT7 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5.41□□□□□ -1.54
C9orf72Q96LT7 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC5.41□□□□□ -1.54
C9orf72Q96LT7 AC011225.1-201ENST00000457751 369 ntBASIC5.41□□□□□ -1.54
C9orf72Q96LT7 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.41□□□□□ -1.54
C9orf72Q96LT7 RN7SL51P-201ENST00000468230 285 ntBASIC5.41□□□□□ -1.54
C9orf72Q96LT7 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.41□□□□□ -1.54
C9orf72Q96LT7 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.41□□□□□ -1.54
C9orf72Q96LT7 AC022133.1-201ENST00000490961 571 ntBASIC5.41□□□□□ -1.54
C9orf72Q96LT7 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.41□□□□□ -1.54
C9orf72Q96LT7 AC022360.1-201ENST00000521058 340 ntBASIC5.41□□□□□ -1.54
C9orf72Q96LT7 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.41□□□□□ -1.54
C9orf72Q96LT7 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC5.41□□□□□ -1.54
C9orf72Q96LT7 OR7E18P-201ENST00000592589 702 ntBASIC5.41□□□□□ -1.54
C9orf72Q96LT7 FKBP1AP1-201ENST00000594588 318 ntBASIC5.41□□□□□ -1.54
C9orf72Q96LT7 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.41□□□□□ -1.54
C9orf72Q96LT7 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.41□□□□□ -1.54
C9orf72Q96LT7 IMMP1LP3-201ENST00000604197 224 ntBASIC5.41□□□□□ -1.54
C9orf72Q96LT7 SUGT1P3-202ENST00000604259 383 ntBASIC5.41□□□□□ -1.54
C9orf72Q96LT7 OR51C1P-201ENST00000608504 942 ntBASIC5.41□□□□□ -1.54
C9orf72Q96LT7 AL359513.1-201ENST00000614364 557 ntBASIC5.41□□□□□ -1.54
C9orf72Q96LT7 AC005840.5-201ENST00000619166 599 ntBASIC5.41□□□□□ -1.54
C9orf72Q96LT7 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC5.41□□□□□ -1.54
C9orf72Q96LT7 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC5.41□□□□□ -1.54
C9orf72Q96LT7 AC073869.7-201ENST00000640874 297 ntBASIC5.41□□□□□ -1.54
C9orf72Q96LT7 SAMMSON-227ENST00000642114 1199 ntBASIC5.41□□□□□ -1.54
C9orf72Q96LT7 AL031595.2-201ENST00000624215 19071 ntBASIC5.41□□□□□ -1.54
C9orf72Q96LT7 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
C9orf72Q96LT7 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.41□□□□□ -1.54
C9orf72Q96LT7 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
C9orf72Q96LT7 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
C9orf72Q96LT7 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
C9orf72Q96LT7 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.41□□□□□ -1.54
C9orf72Q96LT7 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
C9orf72Q96LT7 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.41□□□□□ -1.54
C9orf72Q96LT7 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.41□□□□□ -1.54
C9orf72Q96LT7 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
C9orf72Q96LT7 AP005432.1-201ENST00000580891 3485 ntBASIC5.4□□□□□ -1.54
C9orf72Q96LT7 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
C9orf72Q96LT7 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.4□□□□□ -1.54
C9orf72Q96LT7 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.54
C9orf72Q96LT7 AL731532.2-201ENST00000623542 1953 ntBASIC5.4□□□□□ -1.54
C9orf72Q96LT7 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
C9orf72Q96LT7 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
C9orf72Q96LT7 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
C9orf72Q96LT7 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
C9orf72Q96LT7 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
C9orf72Q96LT7 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
C9orf72Q96LT7 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
C9orf72Q96LT7 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.4□□□□□ -1.54
C9orf72Q96LT7 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
C9orf72Q96LT7 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
C9orf72Q96LT7 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.4□□□□□ -1.54
C9orf72Q96LT7 RNA5SP234-201ENST00000363916 119 ntBASIC5.4□□□□□ -1.54
C9orf72Q96LT7 AC009804.1-201ENST00000400949 179 ntBASIC5.4□□□□□ -1.54
C9orf72Q96LT7 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
C9orf72Q96LT7 RN7SKP16-201ENST00000410180 299 ntBASIC5.4□□□□□ -1.54
C9orf72Q96LT7 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC5.4□□□□□ -1.54
C9orf72Q96LT7 PCNPP4-201ENST00000414817 517 ntBASIC5.4□□□□□ -1.54
C9orf72Q96LT7 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC5.4□□□□□ -1.54
C9orf72Q96LT7 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC5.4□□□□□ -1.54
C9orf72Q96LT7 GSTM5P1-201ENST00000434751 660 ntBASIC5.4□□□□□ -1.54
C9orf72Q96LT7 AC046176.1-201ENST00000435260 1170 ntBASIC5.4□□□□□ -1.54
C9orf72Q96LT7 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.4□□□□□ -1.54
C9orf72Q96LT7 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
C9orf72Q96LT7 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.4□□□□□ -1.54
C9orf72Q96LT7 OR2AO1P-201ENST00000476497 403 ntBASIC5.4□□□□□ -1.54
C9orf72Q96LT7 AC090638.1-201ENST00000498296 909 ntBASIC5.4□□□□□ -1.54
C9orf72Q96LT7 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.4□□□□□ -1.54
C9orf72Q96LT7 RNA5SP34-201ENST00000516887 130 ntBASIC5.4□□□□□ -1.54
C9orf72Q96LT7 SCARNA16.4-201ENST00000516956 187 ntBASIC5.4□□□□□ -1.54
C9orf72Q96LT7 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.4□□□□□ -1.54
C9orf72Q96LT7 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
C9orf72Q96LT7 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC5.4□□□□□ -1.54
C9orf72Q96LT7 AC105036.1-201ENST00000566222 271 ntBASIC5.4□□□□□ -1.54
C9orf72Q96LT7 AC009852.2-201ENST00000567898 485 ntBASIC5.4□□□□□ -1.54
C9orf72Q96LT7 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
C9orf72Q96LT7 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.4□□□□□ -1.54
C9orf72Q96LT7 AC006363.1-201ENST00000603806 463 ntBASIC5.4□□□□□ -1.54
C9orf72Q96LT7 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.4□□□□□ -1.54
C9orf72Q96LT7 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.4□□□□□ -1.54
C9orf72Q96LT7 SDR42E1P1-201ENST00000611327 477 ntBASIC5.4□□□□□ -1.54
C9orf72Q96LT7 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.4□□□□□ -1.54
C9orf72Q96LT7 CASC19-264ENST00000641912 1184 ntBASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms