Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC6.43□□□□□ -1.38
CDK5RAP3Q96JB5 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC6.43□□□□□ -1.38
CDK5RAP3Q96JB5 RNU6-1257P-201ENST00000384625 110 ntBASIC6.43□□□□□ -1.38
CDK5RAP3Q96JB5 MIR130A-201ENST00000385274 89 ntBASIC6.43□□□□□ -1.38
CDK5RAP3Q96JB5 HMGN1P20-201ENST00000411849 300 ntBASIC6.43□□□□□ -1.38
CDK5RAP3Q96JB5 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CDK5RAP3Q96JB5 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC6.43□□□□□ -1.38
CDK5RAP3Q96JB5 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CDK5RAP3Q96JB5 BX119321.1-201ENST00000428912 797 ntBASIC6.43□□□□□ -1.38
CDK5RAP3Q96JB5 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC6.43□□□□□ -1.38
CDK5RAP3Q96JB5 FTO-202ENST00000431610 707 ntTSL 3 BASIC6.43□□□□□ -1.38
CDK5RAP3Q96JB5 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC6.43□□□□□ -1.38
CDK5RAP3Q96JB5 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CDK5RAP3Q96JB5 MTCYBP21-201ENST00000443300 1113 ntBASIC6.43□□□□□ -1.38
CDK5RAP3Q96JB5 RPL5P10-201ENST00000445207 894 ntBASIC6.43□□□□□ -1.38
CDK5RAP3Q96JB5 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CDK5RAP3Q96JB5 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CDK5RAP3Q96JB5 AC022215.1-201ENST00000481770 362 ntBASIC6.43□□□□□ -1.38
CDK5RAP3Q96JB5 RPS7P6-201ENST00000485777 579 ntBASIC6.43□□□□□ -1.38
CDK5RAP3Q96JB5 AC090058.1-201ENST00000498788 435 ntBASIC6.43□□□□□ -1.38
CDK5RAP3Q96JB5 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC6.43□□□□□ -1.38
CDK5RAP3Q96JB5 AC121161.1-201ENST00000510606 652 ntBASIC6.43□□□□□ -1.38
CDK5RAP3Q96JB5 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC6.43□□□□□ -1.38
CDK5RAP3Q96JB5 AC021678.3-201ENST00000517893 476 ntBASIC6.43□□□□□ -1.38
CDK5RAP3Q96JB5 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC6.43□□□□□ -1.38
CDK5RAP3Q96JB5 AL512310.9-201ENST00000553311 948 ntBASIC6.43□□□□□ -1.38
CDK5RAP3Q96JB5 AC025918.2-201ENST00000558683 763 ntBASIC6.43□□□□□ -1.38
CDK5RAP3Q96JB5 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC6.43□□□□□ -1.38
CDK5RAP3Q96JB5 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC6.43□□□□□ -1.38
CDK5RAP3Q96JB5 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC6.43□□□□□ -1.38
CDK5RAP3Q96JB5 RN7SL339P-201ENST00000580597 296 ntBASIC6.43□□□□□ -1.38
CDK5RAP3Q96JB5 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CDK5RAP3Q96JB5 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CDK5RAP3Q96JB5 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC6.43□□□□□ -1.38
CDK5RAP3Q96JB5 AC018754.1-201ENST00000607486 925 ntBASIC6.43□□□□□ -1.38
CDK5RAP3Q96JB5 Z95327.3-201ENST00000610385 572 ntBASIC6.43□□□□□ -1.38
CDK5RAP3Q96JB5 AL035661.1-201ENST00000620459 1144 ntBASIC6.43□□□□□ -1.38
CDK5RAP3Q96JB5 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC6.43□□□□□ -1.38
CDK5RAP3Q96JB5 AC099654.6-201ENST00000636487 512 ntBASIC6.43□□□□□ -1.38
CDK5RAP3Q96JB5 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC6.43□□□□□ -1.38
CDK5RAP3Q96JB5 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CDK5RAP3Q96JB5 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC6.43□□□□□ -1.38
CDK5RAP3Q96JB5 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
CDK5RAP3Q96JB5 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CDK5RAP3Q96JB5 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
CDK5RAP3Q96JB5 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC6.42□□□□□ -1.38
CDK5RAP3Q96JB5 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
CDK5RAP3Q96JB5 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC6.42□□□□□ -1.38
CDK5RAP3Q96JB5 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CDK5RAP3Q96JB5 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CDK5RAP3Q96JB5 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
CDK5RAP3Q96JB5 OR7E101P-201ENST00000400428 513 ntBASIC6.42□□□□□ -1.38
CDK5RAP3Q96JB5 TAF9BP2-201ENST00000400856 499 ntBASIC6.42□□□□□ -1.38
CDK5RAP3Q96JB5 AL391422.1-201ENST00000402155 436 ntBASIC6.42□□□□□ -1.38
CDK5RAP3Q96JB5 LSM5-206ENST00000409987 504 ntTSL 5 BASIC6.42□□□□□ -1.38
CDK5RAP3Q96JB5 RN7SKP279-201ENST00000411383 298 ntBASIC6.42□□□□□ -1.38
CDK5RAP3Q96JB5 AL158050.1-201ENST00000416077 457 ntBASIC6.42□□□□□ -1.38
CDK5RAP3Q96JB5 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC6.42□□□□□ -1.38
CDK5RAP3Q96JB5 AC021876.1-201ENST00000425959 359 ntBASIC6.42□□□□□ -1.38
CDK5RAP3Q96JB5 AC242426.1-201ENST00000435270 960 ntBASIC6.42□□□□□ -1.38
CDK5RAP3Q96JB5 GAPDHP48-201ENST00000436626 961 ntBASIC6.42□□□□□ -1.38
CDK5RAP3Q96JB5 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC6.42□□□□□ -1.38
CDK5RAP3Q96JB5 NDUFA5P5-201ENST00000468361 342 ntBASIC6.42□□□□□ -1.38
CDK5RAP3Q96JB5 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC6.42□□□□□ -1.38
CDK5RAP3Q96JB5 PPM1AP1-201ENST00000502740 1135 ntBASIC6.42□□□□□ -1.38
CDK5RAP3Q96JB5 AC118282.1-201ENST00000506408 765 ntBASIC6.42□□□□□ -1.38
CDK5RAP3Q96JB5 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC6.42□□□□□ -1.38
CDK5RAP3Q96JB5 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CDK5RAP3Q96JB5 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC6.42□□□□□ -1.38
CDK5RAP3Q96JB5 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC6.42□□□□□ -1.38
CDK5RAP3Q96JB5 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC6.42□□□□□ -1.38
CDK5RAP3Q96JB5 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC6.42□□□□□ -1.38
CDK5RAP3Q96JB5 AC079600.1-201ENST00000550326 297 ntBASIC6.42□□□□□ -1.38
CDK5RAP3Q96JB5 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC6.42□□□□□ -1.38
CDK5RAP3Q96JB5 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC6.42□□□□□ -1.38
CDK5RAP3Q96JB5 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC6.42□□□□□ -1.38
CDK5RAP3Q96JB5 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC6.42□□□□□ -1.38
CDK5RAP3Q96JB5 AC063944.3-201ENST00000609969 533 ntBASIC6.42□□□□□ -1.38
CDK5RAP3Q96JB5 AP005229.2-201ENST00000609980 697 ntBASIC6.42□□□□□ -1.38
CDK5RAP3Q96JB5 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC6.42□□□□□ -1.38
CDK5RAP3Q96JB5 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC6.42□□□□□ -1.38
CDK5RAP3Q96JB5 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC6.42□□□□□ -1.38
CDK5RAP3Q96JB5 AC000095.2-202ENST00000637415 154 ntBASIC6.42□□□□□ -1.38
CDK5RAP3Q96JB5 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
CDK5RAP3Q96JB5 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC6.42□□□□□ -1.38
CDK5RAP3Q96JB5 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC6.42□□□□□ -1.38
CDK5RAP3Q96JB5 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CDK5RAP3Q96JB5 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CDK5RAP3Q96JB5 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC6.42□□□□□ -1.38
CDK5RAP3Q96JB5 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC6.42□□□□□ -1.38
CDK5RAP3Q96JB5 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CDK5RAP3Q96JB5 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CDK5RAP3Q96JB5 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CDK5RAP3Q96JB5 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
CDK5RAP3Q96JB5 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC6.41□□□□□ -1.38
CDK5RAP3Q96JB5 AL159987.1-201ENST00000347911 293 ntBASIC6.41□□□□□ -1.38
CDK5RAP3Q96JB5 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
CDK5RAP3Q96JB5 RPS3AP2-201ENST00000407190 754 ntBASIC6.41□□□□□ -1.38
CDK5RAP3Q96JB5 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC6.41□□□□□ -1.38
CDK5RAP3Q96JB5 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms