Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC4.9□□□□□ -1.63
RFT1Q96AA3 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC4.9□□□□□ -1.63
RFT1Q96AA3 NPM1P33-201ENST00000438918 872 ntBASIC4.9□□□□□ -1.63
RFT1Q96AA3 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC4.9□□□□□ -1.63
RFT1Q96AA3 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
RFT1Q96AA3 AC073476.1-201ENST00000452854 407 ntBASIC4.9□□□□□ -1.63
RFT1Q96AA3 CST12P-201ENST00000457644 362 ntBASIC4.9□□□□□ -1.63
RFT1Q96AA3 AC009963.3-201ENST00000458090 486 ntBASIC4.9□□□□□ -1.63
RFT1Q96AA3 RPS23P2-201ENST00000463671 415 ntBASIC4.9□□□□□ -1.63
RFT1Q96AA3 AC023194.2-201ENST00000465398 406 ntBASIC4.9□□□□□ -1.63
RFT1Q96AA3 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC4.9□□□□□ -1.63
RFT1Q96AA3 ATP5LP5-201ENST00000483050 299 ntBASIC4.9□□□□□ -1.63
RFT1Q96AA3 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC4.9□□□□□ -1.63
RFT1Q96AA3 MYL12BP2-201ENST00000503948 512 ntBASIC4.9□□□□□ -1.63
RFT1Q96AA3 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC4.9□□□□□ -1.63
RFT1Q96AA3 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC4.9□□□□□ -1.63
RFT1Q96AA3 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC4.9□□□□□ -1.63
RFT1Q96AA3 AC034244.2-201ENST00000514668 858 ntBASIC4.9□□□□□ -1.63
RFT1Q96AA3 AC139365.2-201ENST00000517972 253 ntBASIC4.9□□□□□ -1.63
RFT1Q96AA3 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC4.9□□□□□ -1.63
RFT1Q96AA3 AP003396.4-201ENST00000527574 265 ntBASIC4.9□□□□□ -1.63
RFT1Q96AA3 MED21-206ENST00000546323 575 ntTSL 3 BASIC4.9□□□□□ -1.63
RFT1Q96AA3 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
RFT1Q96AA3 RPA2P1-201ENST00000556557 721 ntBASIC4.9□□□□□ -1.63
RFT1Q96AA3 AC002519.2-203ENST00000567043 837 ntBASIC4.9□□□□□ -1.63
RFT1Q96AA3 DHFRP1-201ENST00000579682 559 ntBASIC4.9□□□□□ -1.63
RFT1Q96AA3 AC233702.9-201ENST00000581528 203 ntBASIC4.9□□□□□ -1.63
RFT1Q96AA3 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.9□□□□□ -1.63
RFT1Q96AA3 FAM27E4-201ENST00000605259 342 ntBASIC4.9□□□□□ -1.63
RFT1Q96AA3 AL135786.2-201ENST00000608422 615 ntBASIC4.9□□□□□ -1.63
RFT1Q96AA3 AC090181.3-201ENST00000624777 1514 ntBASIC4.9□□□□□ -1.63
RFT1Q96AA3 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
RFT1Q96AA3 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.9□□□□□ -1.63
RFT1Q96AA3 AL121950.1-201ENST00000624993 2077 ntBASIC4.9□□□□□ -1.63
RFT1Q96AA3 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.63
RFT1Q96AA3 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
RFT1Q96AA3 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
RFT1Q96AA3 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
RFT1Q96AA3 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
RFT1Q96AA3 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.89□□□□□ -1.63
RFT1Q96AA3 AC027088.4-201ENST00000611559 1947 ntBASIC4.89□□□□□ -1.63
RFT1Q96AA3 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
RFT1Q96AA3 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
RFT1Q96AA3 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RFT1Q96AA3 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC4.89□□□□□ -1.63
RFT1Q96AA3 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC4.89□□□□□ -1.63
RFT1Q96AA3 AL034549.2-201ENST00000618285 3373 ntBASIC4.89□□□□□ -1.63
RFT1Q96AA3 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
RFT1Q96AA3 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RFT1Q96AA3 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
RFT1Q96AA3 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RFT1Q96AA3 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RFT1Q96AA3 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC4.89□□□□□ -1.63
RFT1Q96AA3 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RFT1Q96AA3 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
RFT1Q96AA3 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC4.89□□□□□ -1.63
RFT1Q96AA3 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RFT1Q96AA3 HIST1H3PS1-201ENST00000404612 417 ntBASIC4.89□□□□□ -1.63
RFT1Q96AA3 MIR1275-201ENST00000408770 80 ntBASIC4.89□□□□□ -1.63
RFT1Q96AA3 AC211486.3-201ENST00000412694 621 ntBASIC4.89□□□□□ -1.63
RFT1Q96AA3 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.89□□□□□ -1.63
RFT1Q96AA3 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
RFT1Q96AA3 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.89□□□□□ -1.63
RFT1Q96AA3 MTND4LP14-201ENST00000429447 288 ntBASIC4.89□□□□□ -1.63
RFT1Q96AA3 AC093716.1-201ENST00000435923 377 ntBASIC4.89□□□□□ -1.63
RFT1Q96AA3 MTCYBP29-201ENST00000436327 1006 ntBASIC4.89□□□□□ -1.63
RFT1Q96AA3 TUBB4BP6-201ENST00000437576 479 ntBASIC4.89□□□□□ -1.63
RFT1Q96AA3 MTND5P8-201ENST00000449817 1083 ntBASIC4.89□□□□□ -1.63
RFT1Q96AA3 CALM1P2-201ENST00000452941 448 ntBASIC4.89□□□□□ -1.63
RFT1Q96AA3 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC4.89□□□□□ -1.63
RFT1Q96AA3 AC245028.2-201ENST00000458673 253 ntBASIC4.89□□□□□ -1.63
RFT1Q96AA3 UBFD1P1-201ENST00000473259 814 ntBASIC4.89□□□□□ -1.63
RFT1Q96AA3 NPM1P29-201ENST00000483112 803 ntBASIC4.89□□□□□ -1.63
RFT1Q96AA3 RPL32P33-201ENST00000487023 394 ntBASIC4.89□□□□□ -1.63
RFT1Q96AA3 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC4.89□□□□□ -1.63
RFT1Q96AA3 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC4.89□□□□□ -1.63
RFT1Q96AA3 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC4.89□□□□□ -1.63
RFT1Q96AA3 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC4.89□□□□□ -1.63
RFT1Q96AA3 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
RFT1Q96AA3 PCNAP4-201ENST00000532690 730 ntBASIC4.89□□□□□ -1.63
RFT1Q96AA3 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC4.89□□□□□ -1.63
RFT1Q96AA3 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC4.89□□□□□ -1.63
RFT1Q96AA3 AP002373.2-201ENST00000541631 1060 ntBASIC4.89□□□□□ -1.63
RFT1Q96AA3 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC4.89□□□□□ -1.63
RFT1Q96AA3 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC4.89□□□□□ -1.63
RFT1Q96AA3 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC4.89□□□□□ -1.63
RFT1Q96AA3 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC4.89□□□□□ -1.63
RFT1Q96AA3 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
RFT1Q96AA3 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC4.89□□□□□ -1.63
RFT1Q96AA3 AL133247.2-201ENST00000603236 482 ntBASIC4.89□□□□□ -1.63
RFT1Q96AA3 AL136131.3-201ENST00000607600 188 ntBASIC4.89□□□□□ -1.63
RFT1Q96AA3 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC4.89□□□□□ -1.63
RFT1Q96AA3 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RFT1Q96AA3 RPL23AP61-201ENST00000623642 466 ntBASIC4.89□□□□□ -1.63
RFT1Q96AA3 AP003499.2-201ENST00000624100 483 ntBASIC4.89□□□□□ -1.63
RFT1Q96AA3 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC4.89□□□□□ -1.63
RFT1Q96AA3 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC4.89□□□□□ -1.63
RFT1Q96AA3 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RFT1Q96AA3 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.89□□□□□ -1.63
RFT1Q96AA3 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms