Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 RN7SL561P-201ENST00000488553 281 ntBASIC6.44□□□□□ -1.38
SYNPOQ8N3V7 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC6.44□□□□□ -1.38
SYNPOQ8N3V7 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SYNPOQ8N3V7 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC6.44□□□□□ -1.38
SYNPOQ8N3V7 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC6.44□□□□□ -1.38
SYNPOQ8N3V7 AC138938.1-201ENST00000515431 782 ntBASIC6.44□□□□□ -1.38
SYNPOQ8N3V7 AC023632.1-201ENST00000518463 375 ntBASIC6.44□□□□□ -1.38
SYNPOQ8N3V7 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC6.44□□□□□ -1.38
SYNPOQ8N3V7 LECT2-205ENST00000522943 574 ntTSL 3 BASIC6.44□□□□□ -1.38
SYNPOQ8N3V7 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SYNPOQ8N3V7 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC6.44□□□□□ -1.38
SYNPOQ8N3V7 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC6.44□□□□□ -1.38
SYNPOQ8N3V7 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC6.44□□□□□ -1.38
SYNPOQ8N3V7 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SYNPOQ8N3V7 AADACP1-206ENST00000561502 1193 ntBASIC6.44□□□□□ -1.38
SYNPOQ8N3V7 AL132657.2-201ENST00000564417 358 ntBASIC6.44□□□□□ -1.38
SYNPOQ8N3V7 AGGF1P6-201ENST00000569213 976 ntBASIC6.44□□□□□ -1.38
SYNPOQ8N3V7 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC6.44□□□□□ -1.38
SYNPOQ8N3V7 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC6.44□□□□□ -1.38
SYNPOQ8N3V7 AC090236.2-201ENST00000587933 1101 ntBASIC6.44□□□□□ -1.38
SYNPOQ8N3V7 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
SYNPOQ8N3V7 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC6.44□□□□□ -1.38
SYNPOQ8N3V7 uc_338.9-201ENST00000617424 182 ntBASIC6.44□□□□□ -1.38
SYNPOQ8N3V7 CASC22-202ENST00000628396 802 ntTSL 5 BASIC6.44□□□□□ -1.38
SYNPOQ8N3V7 AP001153.1-201ENST00000641024 338 ntBASIC6.44□□□□□ -1.38
SYNPOQ8N3V7 AL391261.1-201ENST00000555712 1479 ntBASIC6.44□□□□□ -1.38
SYNPOQ8N3V7 AC007485.2-201ENST00000623493 1667 ntBASIC6.44□□□□□ -1.38
SYNPOQ8N3V7 CASC19-228ENST00000641414 1684 ntBASIC6.44□□□□□ -1.38
SYNPOQ8N3V7 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SYNPOQ8N3V7 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC6.44□□□□□ -1.38
SYNPOQ8N3V7 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
SYNPOQ8N3V7 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
SYNPOQ8N3V7 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC6.44□□□□□ -1.38
SYNPOQ8N3V7 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC6.44□□□□□ -1.38
SYNPOQ8N3V7 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SYNPOQ8N3V7 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC6.44□□□□□ -1.38
SYNPOQ8N3V7 MTCO1P6-201ENST00000481192 1384 ntBASIC6.44□□□□□ -1.38
SYNPOQ8N3V7 AC009120.2-204ENST00000621548 2032 ntBASIC6.43□□□□□ -1.38
SYNPOQ8N3V7 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SYNPOQ8N3V7 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC6.43□□□□□ -1.38
SYNPOQ8N3V7 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
SYNPOQ8N3V7 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SYNPOQ8N3V7 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.43□□□□□ -1.38
SYNPOQ8N3V7 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC6.43□□□□□ -1.38
SYNPOQ8N3V7 OR2M1P-201ENST00000318104 951 ntBASIC6.43□□□□□ -1.38
SYNPOQ8N3V7 SNORA40.2-201ENST00000390847 128 ntBASIC6.43□□□□□ -1.38
SYNPOQ8N3V7 ELOCP9-201ENST00000418624 239 ntBASIC6.43□□□□□ -1.38
SYNPOQ8N3V7 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC6.43□□□□□ -1.38
SYNPOQ8N3V7 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC6.43□□□□□ -1.38
SYNPOQ8N3V7 USP9YP11-201ENST00000427537 717 ntBASIC6.43□□□□□ -1.38
SYNPOQ8N3V7 AC092473.1-201ENST00000441098 221 ntBASIC6.43□□□□□ -1.38
SYNPOQ8N3V7 EXTL2P1-201ENST00000446218 416 ntBASIC6.43□□□□□ -1.38
SYNPOQ8N3V7 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC6.43□□□□□ -1.38
SYNPOQ8N3V7 Z99714.1-201ENST00000450463 807 ntBASIC6.43□□□□□ -1.38
SYNPOQ8N3V7 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC6.43□□□□□ -1.38
SYNPOQ8N3V7 HLA-DPA3-207ENST00000454398 229 ntBASIC6.43□□□□□ -1.38
SYNPOQ8N3V7 ATG12P2-201ENST00000456830 416 ntBASIC6.43□□□□□ -1.38
SYNPOQ8N3V7 AL122001.1-201ENST00000457027 370 ntBASIC6.43□□□□□ -1.38
SYNPOQ8N3V7 ACA64.1-201ENST00000459171 127 ntBASIC6.43□□□□□ -1.38
SYNPOQ8N3V7 RPL23AP64-201ENST00000469465 435 ntBASIC6.43□□□□□ -1.38
SYNPOQ8N3V7 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC6.43□□□□□ -1.38
SYNPOQ8N3V7 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SYNPOQ8N3V7 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC6.43□□□□□ -1.38
SYNPOQ8N3V7 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC6.43□□□□□ -1.38
SYNPOQ8N3V7 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC6.43□□□□□ -1.38
SYNPOQ8N3V7 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC6.43□□□□□ -1.38
SYNPOQ8N3V7 AC090958.1-201ENST00000511122 351 ntBASIC6.43□□□□□ -1.38
SYNPOQ8N3V7 SNORD46.2-201ENST00000516021 102 ntBASIC6.43□□□□□ -1.38
SYNPOQ8N3V7 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC6.43□□□□□ -1.38
SYNPOQ8N3V7 AP000926.4-201ENST00000527351 454 ntBASIC6.43□□□□□ -1.38
SYNPOQ8N3V7 EIF4A2P5-201ENST00000529914 499 ntBASIC6.43□□□□□ -1.38
SYNPOQ8N3V7 ASB8-215ENST00000540782 659 ntTSL 3 BASIC6.43□□□□□ -1.38
SYNPOQ8N3V7 MTCYBP27-201ENST00000555160 670 ntBASIC6.43□□□□□ -1.38
SYNPOQ8N3V7 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC6.43□□□□□ -1.38
SYNPOQ8N3V7 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC6.43□□□□□ -1.38
SYNPOQ8N3V7 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC6.43□□□□□ -1.38
SYNPOQ8N3V7 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC6.43□□□□□ -1.38
SYNPOQ8N3V7 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC6.43□□□□□ -1.38
SYNPOQ8N3V7 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC6.43□□□□□ -1.38
SYNPOQ8N3V7 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC6.43□□□□□ -1.38
SYNPOQ8N3V7 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC6.43□□□□□ -1.38
SYNPOQ8N3V7 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC6.43□□□□□ -1.38
SYNPOQ8N3V7 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC6.43□□□□□ -1.38
SYNPOQ8N3V7 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SYNPOQ8N3V7 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
SYNPOQ8N3V7 AC027243.2-201ENST00000602530 724 ntBASIC6.43□□□□□ -1.38
SYNPOQ8N3V7 AL359704.2-201ENST00000604335 521 ntBASIC6.43□□□□□ -1.38
SYNPOQ8N3V7 AP003392.5-201ENST00000607857 415 ntBASIC6.43□□□□□ -1.38
SYNPOQ8N3V7 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC6.43□□□□□ -1.38
SYNPOQ8N3V7 AC099676.1-201ENST00000608886 657 ntBASIC6.43□□□□□ -1.38
SYNPOQ8N3V7 AC131159.1-201ENST00000621854 213 ntBASIC6.43□□□□□ -1.38
SYNPOQ8N3V7 AC026422.1-201ENST00000623961 452 ntBASIC6.43□□□□□ -1.38
SYNPOQ8N3V7 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
SYNPOQ8N3V7 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SYNPOQ8N3V7 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SYNPOQ8N3V7 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SYNPOQ8N3V7 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
SYNPOQ8N3V7 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC6.43□□□□□ -1.38
SYNPOQ8N3V7 AC013488.1-201ENST00000526618 1838 ntBASIC6.43□□□□□ -1.38
SYNPOQ8N3V7 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms