Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AC023512.1-201ENST00000444513 499 ntBASIC6.23□□□□□ -1.41
TRIM48Q8IWZ4 AC007327.1-201ENST00000447461 264 ntBASIC6.23□□□□□ -1.41
TRIM48Q8IWZ4 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC6.23□□□□□ -1.41
TRIM48Q8IWZ4 AC097262.1-201ENST00000452559 548 ntBASIC6.23□□□□□ -1.41
TRIM48Q8IWZ4 CCNJP2-201ENST00000457810 1163 ntBASIC6.23□□□□□ -1.41
TRIM48Q8IWZ4 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC6.23□□□□□ -1.41
TRIM48Q8IWZ4 RN7SL254P-201ENST00000460609 284 ntBASIC6.23□□□□□ -1.41
TRIM48Q8IWZ4 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC6.23□□□□□ -1.41
TRIM48Q8IWZ4 AP002453.1-201ENST00000492327 668 ntBASIC6.23□□□□□ -1.41
TRIM48Q8IWZ4 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC6.23□□□□□ -1.41
TRIM48Q8IWZ4 AC113347.3-201ENST00000509113 148 ntBASIC6.23□□□□□ -1.41
TRIM48Q8IWZ4 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC6.23□□□□□ -1.41
TRIM48Q8IWZ4 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC6.23□□□□□ -1.41
TRIM48Q8IWZ4 RNA5SP473-201ENST00000516402 125 ntBASIC6.23□□□□□ -1.41
TRIM48Q8IWZ4 MTCYBP19-201ENST00000517463 1124 ntBASIC6.23□□□□□ -1.41
TRIM48Q8IWZ4 AC011853.1-201ENST00000518911 454 ntBASIC6.23□□□□□ -1.41
TRIM48Q8IWZ4 IGKV1D-22-201ENST00000518953 324 ntBASIC6.23□□□□□ -1.41
TRIM48Q8IWZ4 AC073581.1-201ENST00000519036 575 ntBASIC6.23□□□□□ -1.41
TRIM48Q8IWZ4 AC134698.4-201ENST00000523451 826 ntBASIC6.23□□□□□ -1.41
TRIM48Q8IWZ4 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC6.23□□□□□ -1.41
TRIM48Q8IWZ4 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC6.23□□□□□ -1.41
TRIM48Q8IWZ4 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC6.23□□□□□ -1.41
TRIM48Q8IWZ4 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC6.23□□□□□ -1.41
TRIM48Q8IWZ4 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC6.23□□□□□ -1.41
TRIM48Q8IWZ4 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC6.23□□□□□ -1.41
TRIM48Q8IWZ4 MIR3915-201ENST00000578518 97 ntBASIC6.23□□□□□ -1.41
TRIM48Q8IWZ4 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC6.23□□□□□ -1.41
TRIM48Q8IWZ4 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC6.23□□□□□ -1.41
TRIM48Q8IWZ4 SMIM12P1-201ENST00000603004 274 ntBASIC6.23□□□□□ -1.41
TRIM48Q8IWZ4 DUXAP11-201ENST00000603858 526 ntBASIC6.23□□□□□ -1.41
TRIM48Q8IWZ4 AC097467.4-201ENST00000605504 141 ntBASIC6.23□□□□□ -1.41
TRIM48Q8IWZ4 RPSAP75-201ENST00000605848 301 ntBASIC6.23□□□□□ -1.41
TRIM48Q8IWZ4 AL645933.2-201ENST00000606743 1207 ntBASIC6.23□□□□□ -1.41
TRIM48Q8IWZ4 uc_338.31-201ENST00000615595 186 ntBASIC6.23□□□□□ -1.41
TRIM48Q8IWZ4 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
TRIM48Q8IWZ4 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
TRIM48Q8IWZ4 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
TRIM48Q8IWZ4 AL359757.1-201ENST00000623176 255 ntBASIC6.23□□□□□ -1.41
TRIM48Q8IWZ4 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC6.23□□□□□ -1.41
TRIM48Q8IWZ4 RBM12B-AS1-201ENST00000623283 653 ntBASIC6.23□□□□□ -1.41
TRIM48Q8IWZ4 AL359715.5-201ENST00000623431 443 ntBASIC6.23□□□□□ -1.41
TRIM48Q8IWZ4 AF246928.1-201ENST00000623768 87 ntBASIC6.23□□□□□ -1.41
TRIM48Q8IWZ4 AC073593.1-201ENST00000624500 411 ntBASIC6.23□□□□□ -1.41
TRIM48Q8IWZ4 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC6.23□□□□□ -1.41
TRIM48Q8IWZ4 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC6.23□□□□□ -1.41
TRIM48Q8IWZ4 AC111152.1-202ENST00000635848 339 ntBASIC6.23□□□□□ -1.41
TRIM48Q8IWZ4 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC6.23□□□□□ -1.41
TRIM48Q8IWZ4 AL392088.2-201ENST00000637607 285 ntBASIC6.23□□□□□ -1.41
TRIM48Q8IWZ4 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
TRIM48Q8IWZ4 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
TRIM48Q8IWZ4 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC6.23□□□□□ -1.41
TRIM48Q8IWZ4 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
TRIM48Q8IWZ4 CAP1P2-201ENST00000417455 1409 ntBASIC6.23□□□□□ -1.41
TRIM48Q8IWZ4 AC092104.1-201ENST00000497346 1441 ntBASIC6.23□□□□□ -1.41
TRIM48Q8IWZ4 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
TRIM48Q8IWZ4 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
TRIM48Q8IWZ4 ECM1P2-201ENST00000503354 1577 ntBASIC6.23□□□□□ -1.41
TRIM48Q8IWZ4 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
TRIM48Q8IWZ4 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
TRIM48Q8IWZ4 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC6.22□□□□□ -1.41
TRIM48Q8IWZ4 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
TRIM48Q8IWZ4 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC6.22□□□□□ -1.41
TRIM48Q8IWZ4 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
TRIM48Q8IWZ4 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
TRIM48Q8IWZ4 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
TRIM48Q8IWZ4 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
TRIM48Q8IWZ4 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
TRIM48Q8IWZ4 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
TRIM48Q8IWZ4 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
TRIM48Q8IWZ4 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
TRIM48Q8IWZ4 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
TRIM48Q8IWZ4 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
TRIM48Q8IWZ4 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
TRIM48Q8IWZ4 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
TRIM48Q8IWZ4 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
TRIM48Q8IWZ4 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
TRIM48Q8IWZ4 Y_RNA.465-201ENST00000384293 102 ntBASIC6.22□□□□□ -1.41
TRIM48Q8IWZ4 Y_RNA.559-201ENST00000384686 107 ntBASIC6.22□□□□□ -1.41
TRIM48Q8IWZ4 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.22□□□□□ -1.41
TRIM48Q8IWZ4 AL590084.2-201ENST00000401481 382 ntBASIC6.22□□□□□ -1.41
TRIM48Q8IWZ4 AL121977.1-201ENST00000401636 979 ntBASIC6.22□□□□□ -1.41
TRIM48Q8IWZ4 AF274854.1-201ENST00000413236 615 ntBASIC6.22□□□□□ -1.41
TRIM48Q8IWZ4 HMGB3P31-201ENST00000413333 595 ntBASIC6.22□□□□□ -1.41
TRIM48Q8IWZ4 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC6.22□□□□□ -1.41
TRIM48Q8IWZ4 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
TRIM48Q8IWZ4 DSTNP5-201ENST00000427921 523 ntBASIC6.22□□□□□ -1.41
TRIM48Q8IWZ4 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
TRIM48Q8IWZ4 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC6.22□□□□□ -1.41
TRIM48Q8IWZ4 AL365220.1-201ENST00000432923 399 ntBASIC6.22□□□□□ -1.41
TRIM48Q8IWZ4 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC6.22□□□□□ -1.41
TRIM48Q8IWZ4 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
TRIM48Q8IWZ4 GAPDHP59-201ENST00000435908 267 ntBASIC6.22□□□□□ -1.41
TRIM48Q8IWZ4 AC129850.1-201ENST00000436203 508 ntBASIC6.22□□□□□ -1.41
TRIM48Q8IWZ4 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC6.22□□□□□ -1.41
TRIM48Q8IWZ4 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
TRIM48Q8IWZ4 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC6.22□□□□□ -1.41
TRIM48Q8IWZ4 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC6.22□□□□□ -1.41
TRIM48Q8IWZ4 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC6.22□□□□□ -1.41
TRIM48Q8IWZ4 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC6.22□□□□□ -1.41
TRIM48Q8IWZ4 RN7SL369P-201ENST00000477138 299 ntBASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 135.1 ms