Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
NPAS4Q8IUM7 KIDINS220-201ENST00000256707 7361 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
NPAS4Q8IUM7 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC7.18□□□□□ -1.26
NPAS4Q8IUM7 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
NPAS4Q8IUM7 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
NPAS4Q8IUM7 RNU6-1066P-201ENST00000363573 105 ntBASIC7.18□□□□□ -1.26
NPAS4Q8IUM7 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
NPAS4Q8IUM7 TINAG-202ENST00000370864 692 ntTSL 2 BASIC7.18□□□□□ -1.26
NPAS4Q8IUM7 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC7.18□□□□□ -1.26
NPAS4Q8IUM7 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
NPAS4Q8IUM7 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
NPAS4Q8IUM7 CEACAMP8-201ENST00000413902 580 ntBASIC7.18□□□□□ -1.26
NPAS4Q8IUM7 AL161449.1-201ENST00000414531 1199 ntBASIC7.18□□□□□ -1.26
NPAS4Q8IUM7 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC7.18□□□□□ -1.26
NPAS4Q8IUM7 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC7.18□□□□□ -1.26
NPAS4Q8IUM7 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
NPAS4Q8IUM7 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC7.18□□□□□ -1.26
NPAS4Q8IUM7 OFD1P2Y-201ENST00000421895 1149 ntBASIC7.18□□□□□ -1.26
NPAS4Q8IUM7 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC7.18□□□□□ -1.26
NPAS4Q8IUM7 AC108479.1-201ENST00000431142 427 ntBASIC7.18□□□□□ -1.26
NPAS4Q8IUM7 YWHAQP9-201ENST00000445891 512 ntBASIC7.18□□□□□ -1.26
NPAS4Q8IUM7 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
NPAS4Q8IUM7 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC7.18□□□□□ -1.26
NPAS4Q8IUM7 RPL23AP71-201ENST00000470966 469 ntBASIC7.18□□□□□ -1.26
NPAS4Q8IUM7 AC048346.1-201ENST00000510247 144 ntBASIC7.18□□□□□ -1.26
NPAS4Q8IUM7 AC108471.1-201ENST00000513977 287 ntBASIC7.18□□□□□ -1.26
NPAS4Q8IUM7 MTCO2P32-201ENST00000514865 403 ntBASIC7.18□□□□□ -1.26
NPAS4Q8IUM7 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC7.18□□□□□ -1.26
NPAS4Q8IUM7 RNA5SP135-201ENST00000517019 125 ntBASIC7.18□□□□□ -1.26
NPAS4Q8IUM7 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
NPAS4Q8IUM7 CYCSP25-201ENST00000525280 316 ntBASIC7.18□□□□□ -1.26
NPAS4Q8IUM7 RGS4-207ENST00000527809 817 ntTSL 4 BASIC7.18□□□□□ -1.26
NPAS4Q8IUM7 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
NPAS4Q8IUM7 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC7.18□□□□□ -1.26
NPAS4Q8IUM7 AC002519.2-203ENST00000567043 837 ntBASIC7.18□□□□□ -1.26
NPAS4Q8IUM7 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
NPAS4Q8IUM7 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC7.18□□□□□ -1.26
NPAS4Q8IUM7 AC011921.2-201ENST00000589465 152 ntBASIC7.18□□□□□ -1.26
NPAS4Q8IUM7 AC008759.1-201ENST00000589783 983 ntBASIC7.18□□□□□ -1.26
NPAS4Q8IUM7 AL157899.1-201ENST00000604110 936 ntBASIC7.18□□□□□ -1.26
NPAS4Q8IUM7 AL139286.2-201ENST00000606838 396 ntBASIC7.18□□□□□ -1.26
NPAS4Q8IUM7 AP004247.3-201ENST00000608682 624 ntBASIC7.18□□□□□ -1.26
NPAS4Q8IUM7 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC7.18□□□□□ -1.26
NPAS4Q8IUM7 AL445670.1-201ENST00000618889 801 ntBASIC7.18□□□□□ -1.26
NPAS4Q8IUM7 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC7.18□□□□□ -1.26
NPAS4Q8IUM7 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC7.18□□□□□ -1.26
NPAS4Q8IUM7 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC7.18□□□□□ -1.26
NPAS4Q8IUM7 BEST3-212ENST00000553096 2929 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
NPAS4Q8IUM7 AC027514.1-201ENST00000588561 1603 ntBASIC7.18□□□□□ -1.26
NPAS4Q8IUM7 OR8H1-203ENST00000641600 2927 ntAPPRIS P2 BASIC7.18□□□□□ -1.26
NPAS4Q8IUM7 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC7.18□□□□□ -1.26
NPAS4Q8IUM7 SOD2-211ENST00000538183 14266 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
NPAS4Q8IUM7 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC7.18□□□□□ -1.26
NPAS4Q8IUM7 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC7.18□□□□□ -1.26
NPAS4Q8IUM7 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
NPAS4Q8IUM7 NRXN3-207ENST00000554719 4156 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
NPAS4Q8IUM7 PJA2-201ENST00000361189 4889 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
NPAS4Q8IUM7 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
NPAS4Q8IUM7 CD46-204ENST00000357714 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
NPAS4Q8IUM7 MRE11P1-201ENST00000464884 2127 ntBASIC7.18□□□□□ -1.26
NPAS4Q8IUM7 AC073429.2-201ENST00000569694 1444 ntBASIC7.18□□□□□ -1.26
NPAS4Q8IUM7 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
NPAS4Q8IUM7 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC7.18□□□□□ -1.26
NPAS4Q8IUM7 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC7.18□□□□□ -1.26
NPAS4Q8IUM7 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
NPAS4Q8IUM7 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
NPAS4Q8IUM7 ZBTB34-202ENST00000373452 6528 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
NPAS4Q8IUM7 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC7.17□□□□□ -1.26
NPAS4Q8IUM7 SLA-201ENST00000338087 3451 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
NPAS4Q8IUM7 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
NPAS4Q8IUM7 AL590542.1-201ENST00000449314 1596 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
NPAS4Q8IUM7 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
NPAS4Q8IUM7 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC7.17□□□□□ -1.26
NPAS4Q8IUM7 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC7.17□□□□□ -1.26
NPAS4Q8IUM7 AL121768.1-201ENST00000613917 2544 ntBASIC7.17□□□□□ -1.26
NPAS4Q8IUM7 RPL11P4-201ENST00000332269 436 ntBASIC7.17□□□□□ -1.26
NPAS4Q8IUM7 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC7.17□□□□□ -1.26
NPAS4Q8IUM7 GARNL3-202ENST00000373387 3800 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
NPAS4Q8IUM7 RNA5SP122-201ENST00000384457 108 ntBASIC7.17□□□□□ -1.26
NPAS4Q8IUM7 MT-TH-201ENST00000387441 69 ntBASIC7.17□□□□□ -1.26
NPAS4Q8IUM7 AC003045.1-201ENST00000398779 713 ntBASIC7.17□□□□□ -1.26
NPAS4Q8IUM7 ERMN-202ENST00000409216 746 ntTSL 4 BASIC7.17□□□□□ -1.26
NPAS4Q8IUM7 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC7.17□□□□□ -1.26
NPAS4Q8IUM7 AC083862.1-201ENST00000427378 1242 ntBASIC7.17□□□□□ -1.26
NPAS4Q8IUM7 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC7.17□□□□□ -1.26
NPAS4Q8IUM7 CCNB1IP1P2-201ENST00000432876 818 ntBASIC7.17□□□□□ -1.26
NPAS4Q8IUM7 AC069154.1-201ENST00000432914 542 ntBASIC7.17□□□□□ -1.26
NPAS4Q8IUM7 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC7.17□□□□□ -1.26
NPAS4Q8IUM7 CRYGGP-201ENST00000443337 145 ntBASIC7.17□□□□□ -1.26
NPAS4Q8IUM7 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC7.17□□□□□ -1.26
NPAS4Q8IUM7 TVP23CP1-201ENST00000450317 639 ntBASIC7.17□□□□□ -1.26
NPAS4Q8IUM7 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC7.17□□□□□ -1.26
NPAS4Q8IUM7 SUN3-208ENST00000453192 801 ntTSL 5 BASIC7.17□□□□□ -1.26
NPAS4Q8IUM7 DDX39BP2-208ENST00000453923 258 ntBASIC7.17□□□□□ -1.26
NPAS4Q8IUM7 Z83838.1-202ENST00000456225 839 ntBASIC7.17□□□□□ -1.26
NPAS4Q8IUM7 F11-205ENST00000492972 1204 ntTSL 2 BASIC7.17□□□□□ -1.26
NPAS4Q8IUM7 AC010424.1-201ENST00000506336 297 ntBASIC7.17□□□□□ -1.26
NPAS4Q8IUM7 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC7.17□□□□□ -1.26
NPAS4Q8IUM7 SCARNA5-201ENST00000516201 276 ntBASIC7.17□□□□□ -1.26
NPAS4Q8IUM7 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC7.17□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 162.3 ms