Protein–RNA interactions for Protein: Q5SW96

LDLRAP1, Low density lipoprotein receptor adapter protein 1, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1Q5SW96 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC5.36□□□□□ -1.55
LDLRAP1Q5SW96 DUX4L52-201ENST00000549363 777 ntBASIC5.36□□□□□ -1.55
LDLRAP1Q5SW96 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
LDLRAP1Q5SW96 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC5.36□□□□□ -1.55
LDLRAP1Q5SW96 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.36□□□□□ -1.55
LDLRAP1Q5SW96 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
LDLRAP1Q5SW96 AC007225.2-201ENST00000562529 256 ntBASIC5.36□□□□□ -1.55
LDLRAP1Q5SW96 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
LDLRAP1Q5SW96 RN7SL356P-201ENST00000582228 248 ntBASIC5.36□□□□□ -1.55
LDLRAP1Q5SW96 MIR4660-201ENST00000583549 74 ntBASIC5.36□□□□□ -1.55
LDLRAP1Q5SW96 MIR7853-201ENST00000584820 132 ntBASIC5.36□□□□□ -1.55
LDLRAP1Q5SW96 AP001542.1-201ENST00000591314 200 ntBASIC5.36□□□□□ -1.55
LDLRAP1Q5SW96 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.36□□□□□ -1.55
LDLRAP1Q5SW96 AC006363.1-201ENST00000603806 463 ntBASIC5.36□□□□□ -1.55
LDLRAP1Q5SW96 AC092944.2-201ENST00000605443 889 ntBASIC5.36□□□□□ -1.55
LDLRAP1Q5SW96 AC067838.1-201ENST00000606064 577 ntBASIC5.36□□□□□ -1.55
LDLRAP1Q5SW96 AL159169.2-201ENST00000610061 1269 ntBASIC5.36□□□□□ -1.55
LDLRAP1Q5SW96 MIR6837-201ENST00000620884 64 ntBASIC5.36□□□□□ -1.55
LDLRAP1Q5SW96 AC074101.1-201ENST00000637861 241 ntBASIC5.36□□□□□ -1.55
LDLRAP1Q5SW96 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.36□□□□□ -1.55
LDLRAP1Q5SW96 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
LDLRAP1Q5SW96 TCP11X1-202ENST00000622971 1372 ntBASIC5.36□□□□□ -1.55
LDLRAP1Q5SW96 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
LDLRAP1Q5SW96 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
LDLRAP1Q5SW96 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
LDLRAP1Q5SW96 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.36□□□□□ -1.55
LDLRAP1Q5SW96 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.36□□□□□ -1.55
LDLRAP1Q5SW96 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
LDLRAP1Q5SW96 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LDLRAP1Q5SW96 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LDLRAP1Q5SW96 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
LDLRAP1Q5SW96 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.35□□□□□ -1.55
LDLRAP1Q5SW96 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
LDLRAP1Q5SW96 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LDLRAP1Q5SW96 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.35□□□□□ -1.55
LDLRAP1Q5SW96 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LDLRAP1Q5SW96 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.35□□□□□ -1.55
LDLRAP1Q5SW96 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
LDLRAP1Q5SW96 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
LDLRAP1Q5SW96 RNU6-697P-201ENST00000363348 107 ntBASIC5.35□□□□□ -1.55
LDLRAP1Q5SW96 DBIP1-201ENST00000401435 260 ntBASIC5.35□□□□□ -1.55
LDLRAP1Q5SW96 AL133388.1-201ENST00000404509 287 ntBASIC5.35□□□□□ -1.55
LDLRAP1Q5SW96 RNA5SP487-201ENST00000410186 122 ntBASIC5.35□□□□□ -1.55
LDLRAP1Q5SW96 RN7SKP59-201ENST00000410520 314 ntBASIC5.35□□□□□ -1.55
LDLRAP1Q5SW96 NPM1P4-201ENST00000414095 812 ntBASIC5.35□□□□□ -1.55
LDLRAP1Q5SW96 AL133325.1-201ENST00000421090 382 ntBASIC5.35□□□□□ -1.55
LDLRAP1Q5SW96 CYCSP6-201ENST00000434498 302 ntBASIC5.35□□□□□ -1.55
LDLRAP1Q5SW96 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.35□□□□□ -1.55
LDLRAP1Q5SW96 NPM1P19-201ENST00000450070 712 ntBASIC5.35□□□□□ -1.55
LDLRAP1Q5SW96 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.35□□□□□ -1.55
LDLRAP1Q5SW96 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC5.35□□□□□ -1.55
LDLRAP1Q5SW96 OR2AO1P-201ENST00000476497 403 ntBASIC5.35□□□□□ -1.55
LDLRAP1Q5SW96 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.35□□□□□ -1.55
LDLRAP1Q5SW96 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC5.35□□□□□ -1.55
LDLRAP1Q5SW96 SCARNA20.4-201ENST00000516969 131 ntBASIC5.35□□□□□ -1.55
LDLRAP1Q5SW96 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC5.35□□□□□ -1.55
LDLRAP1Q5SW96 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.35□□□□□ -1.55
LDLRAP1Q5SW96 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.35□□□□□ -1.55
LDLRAP1Q5SW96 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.35□□□□□ -1.55
LDLRAP1Q5SW96 AP000769.2-201ENST00000602344 396 ntBASIC5.35□□□□□ -1.55
LDLRAP1Q5SW96 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.35□□□□□ -1.55
LDLRAP1Q5SW96 AL356608.1-201ENST00000610034 820 ntBASIC5.35□□□□□ -1.55
LDLRAP1Q5SW96 AL359513.1-201ENST00000614364 557 ntBASIC5.35□□□□□ -1.55
LDLRAP1Q5SW96 AC109583.2-201ENST00000617367 129 ntBASIC5.35□□□□□ -1.55
LDLRAP1Q5SW96 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC5.35□□□□□ -1.55
LDLRAP1Q5SW96 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC5.35□□□□□ -1.55
LDLRAP1Q5SW96 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.35□□□□□ -1.55
LDLRAP1Q5SW96 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
LDLRAP1Q5SW96 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.35□□□□□ -1.55
LDLRAP1Q5SW96 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
LDLRAP1Q5SW96 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
LDLRAP1Q5SW96 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.35□□□□□ -1.55
LDLRAP1Q5SW96 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.35□□□□□ -1.55
LDLRAP1Q5SW96 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LDLRAP1Q5SW96 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LDLRAP1Q5SW96 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.35□□□□□ -1.55
LDLRAP1Q5SW96 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.35□□□□□ -1.55
LDLRAP1Q5SW96 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
LDLRAP1Q5SW96 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
LDLRAP1Q5SW96 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.34□□□□□ -1.55
LDLRAP1Q5SW96 AC100757.1-201ENST00000616872 1835 ntBASIC5.34□□□□□ -1.55
LDLRAP1Q5SW96 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
LDLRAP1Q5SW96 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
LDLRAP1Q5SW96 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
LDLRAP1Q5SW96 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.55
LDLRAP1Q5SW96 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.34□□□□□ -1.55
LDLRAP1Q5SW96 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
LDLRAP1Q5SW96 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.34□□□□□ -1.55
LDLRAP1Q5SW96 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.34□□□□□ -1.55
LDLRAP1Q5SW96 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.34□□□□□ -1.55
LDLRAP1Q5SW96 RN7SKP162-201ENST00000363605 345 ntBASIC5.34□□□□□ -1.55
LDLRAP1Q5SW96 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC5.34□□□□□ -1.55
LDLRAP1Q5SW96 AL353625.1-202ENST00000366273 571 ntBASIC5.34□□□□□ -1.55
LDLRAP1Q5SW96 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
LDLRAP1Q5SW96 AL672167.2-201ENST00000377164 879 ntBASIC5.34□□□□□ -1.55
LDLRAP1Q5SW96 RNU6-729P-201ENST00000384399 107 ntBASIC5.34□□□□□ -1.55
LDLRAP1Q5SW96 RNU1-77P-201ENST00000390868 162 ntBASIC5.34□□□□□ -1.55
LDLRAP1Q5SW96 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.34□□□□□ -1.55
LDLRAP1Q5SW96 AL390774.1-201ENST00000411924 246 ntBASIC5.34□□□□□ -1.55
LDLRAP1Q5SW96 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms