Protein–RNA interactions for Protein: Q15853

USF2, Upstream stimulatory factor 2, humanhuman

Predicted RBP Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF2Q15853 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
USF2Q15853 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC4.44□□□□□ -1.7
USF2Q15853 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC4.44□□□□□ -1.7
USF2Q15853 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
USF2Q15853 CYCSP11-201ENST00000436426 315 ntBASIC4.44□□□□□ -1.7
USF2Q15853 TUBB4BP6-201ENST00000437576 479 ntBASIC4.44□□□□□ -1.7
USF2Q15853 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC4.44□□□□□ -1.7
USF2Q15853 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.44□□□□□ -1.7
USF2Q15853 ATP5LP2-201ENST00000440646 311 ntBASIC4.44□□□□□ -1.7
USF2Q15853 AC073109.1-201ENST00000445066 978 ntBASIC4.44□□□□□ -1.7
USF2Q15853 AC073587.1-201ENST00000447093 876 ntBASIC4.44□□□□□ -1.7
USF2Q15853 RPS23P9-201ENST00000448848 438 ntBASIC4.44□□□□□ -1.7
USF2Q15853 AC009963.3-201ENST00000458090 486 ntBASIC4.44□□□□□ -1.7
USF2Q15853 AC245028.2-201ENST00000458673 253 ntBASIC4.44□□□□□ -1.7
USF2Q15853 AC099521.1-201ENST00000482557 334 ntBASIC4.44□□□□□ -1.7
USF2Q15853 AC021006.1-201ENST00000489849 553 ntBASIC4.44□□□□□ -1.7
USF2Q15853 APOBEC3AP1-201ENST00000511396 287 ntBASIC4.44□□□□□ -1.7
USF2Q15853 SCARNA18.1-201ENST00000516330 83 ntBASIC4.44□□□□□ -1.7
USF2Q15853 AP003396.4-201ENST00000527574 265 ntBASIC4.44□□□□□ -1.7
USF2Q15853 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC4.44□□□□□ -1.7
USF2Q15853 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.44□□□□□ -1.7
USF2Q15853 SMARCE1P3-201ENST00000553649 1231 ntBASIC4.44□□□□□ -1.7
USF2Q15853 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
USF2Q15853 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
USF2Q15853 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC4.44□□□□□ -1.7
USF2Q15853 AC134669.1-201ENST00000581275 672 ntBASIC4.44□□□□□ -1.7
USF2Q15853 AC090236.2-201ENST00000587933 1101 ntBASIC4.44□□□□□ -1.7
USF2Q15853 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC4.44□□□□□ -1.7
USF2Q15853 AC091167.5-201ENST00000605689 894 ntBASIC4.44□□□□□ -1.7
USF2Q15853 AC108673.3-201ENST00000609183 335 ntBASIC4.44□□□□□ -1.7
USF2Q15853 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
USF2Q15853 AC026367.3-201ENST00000619032 590 ntBASIC4.44□□□□□ -1.7
USF2Q15853 AC105105.5-201ENST00000622635 1294 ntBASIC4.44□□□□□ -1.7
USF2Q15853 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC4.44□□□□□ -1.7
USF2Q15853 KARSP1-201ENST00000451871 1752 ntBASIC4.44□□□□□ -1.7
USF2Q15853 LINC01963-201ENST00000562038 3148 ntBASIC4.44□□□□□ -1.7
USF2Q15853 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
USF2Q15853 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
USF2Q15853 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.44□□□□□ -1.7
USF2Q15853 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
USF2Q15853 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.44□□□□□ -1.7
USF2Q15853 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
USF2Q15853 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
USF2Q15853 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.43□□□□□ -1.7
USF2Q15853 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
USF2Q15853 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
USF2Q15853 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.43□□□□□ -1.7
USF2Q15853 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.43□□□□□ -1.7
USF2Q15853 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC4.43□□□□□ -1.7
USF2Q15853 EEF1A1P33-201ENST00000554413 1362 ntBASIC4.43□□□□□ -1.7
USF2Q15853 AC027088.4-201ENST00000611559 1947 ntBASIC4.43□□□□□ -1.7
USF2Q15853 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
USF2Q15853 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
USF2Q15853 OR10J6P-201ENST00000289731 930 ntBASIC4.43□□□□□ -1.7
USF2Q15853 ODF3-202ENST00000342593 386 ntTSL 5 BASIC4.43□□□□□ -1.7
USF2Q15853 MIR130A-201ENST00000385274 89 ntBASIC4.43□□□□□ -1.7
USF2Q15853 AL359643.1-201ENST00000404109 423 ntBASIC4.43□□□□□ -1.7
USF2Q15853 MIR1271-201ENST00000408537 86 ntBASIC4.43□□□□□ -1.7
USF2Q15853 RN7SKP29-201ENST00000410957 272 ntBASIC4.43□□□□□ -1.7
USF2Q15853 RNU6-603P-201ENST00000411403 107 ntBASIC4.43□□□□□ -1.7
USF2Q15853 AC009784.1-201ENST00000426484 460 ntBASIC4.43□□□□□ -1.7
USF2Q15853 AC104843.2-201ENST00000427666 297 ntBASIC4.43□□□□□ -1.7
USF2Q15853 DSTNP5-201ENST00000427921 523 ntBASIC4.43□□□□□ -1.7
USF2Q15853 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC4.43□□□□□ -1.7
USF2Q15853 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC4.43□□□□□ -1.7
USF2Q15853 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC4.43□□□□□ -1.7
USF2Q15853 EIF5AP4-201ENST00000441206 465 ntBASIC4.43□□□□□ -1.7
USF2Q15853 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC4.43□□□□□ -1.7
USF2Q15853 AC069277.2-201ENST00000454211 432 ntBASIC4.43□□□□□ -1.7
USF2Q15853 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC4.43□□□□□ -1.7
USF2Q15853 AC096741.1-201ENST00000472250 846 ntBASIC4.43□□□□□ -1.7
USF2Q15853 RPS7P6-201ENST00000485777 579 ntBASIC4.43□□□□□ -1.7
USF2Q15853 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC4.43□□□□□ -1.7
USF2Q15853 DUTP1-201ENST00000493631 470 ntBASIC4.43□□□□□ -1.7
USF2Q15853 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
USF2Q15853 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC4.43□□□□□ -1.7
USF2Q15853 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC4.43□□□□□ -1.7
USF2Q15853 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC4.43□□□□□ -1.7
USF2Q15853 HSD3BP3-201ENST00000514706 994 ntBASIC4.43□□□□□ -1.7
USF2Q15853 RNA5SP360-201ENST00000516555 118 ntBASIC4.43□□□□□ -1.7
USF2Q15853 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC4.43□□□□□ -1.7
USF2Q15853 WBP1LP3-201ENST00000523033 208 ntBASIC4.43□□□□□ -1.7
USF2Q15853 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.43□□□□□ -1.7
USF2Q15853 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC4.43□□□□□ -1.7
USF2Q15853 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC4.43□□□□□ -1.7
USF2Q15853 MED21-206ENST00000546323 575 ntTSL 3 BASIC4.43□□□□□ -1.7
USF2Q15853 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
USF2Q15853 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC4.43□□□□□ -1.7
USF2Q15853 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.43□□□□□ -1.7
USF2Q15853 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC4.43□□□□□ -1.7
USF2Q15853 SNX6P1-201ENST00000601728 1224 ntBASIC4.43□□□□□ -1.7
USF2Q15853 AC017076.1-201ENST00000607613 578 ntBASIC4.43□□□□□ -1.7
USF2Q15853 AL683826.1-201ENST00000624104 627 ntBASIC4.43□□□□□ -1.7
USF2Q15853 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.43□□□□□ -1.7
USF2Q15853 AC073592.6-201ENST00000624271 415 ntBASIC4.43□□□□□ -1.7
USF2Q15853 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC4.43□□□□□ -1.7
USF2Q15853 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
USF2Q15853 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
USF2Q15853 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC4.43□□□□□ -1.7
USF2Q15853 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms