Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.22□□□□□ -1.57
LTBQ06643 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.22□□□□□ -1.57
LTBQ06643 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.22□□□□□ -1.57
LTBQ06643 CDY11P-201ENST00000447168 1651 ntBASIC5.22□□□□□ -1.57
LTBQ06643 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
LTBQ06643 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
LTBQ06643 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.22□□□□□ -1.57
LTBQ06643 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
LTBQ06643 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
LTBQ06643 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
LTBQ06643 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
LTBQ06643 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
LTBQ06643 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
LTBQ06643 RNA5SP132-201ENST00000364725 118 ntBASIC5.22□□□□□ -1.57
LTBQ06643 AC245060.4-201ENST00000413293 1121 ntBASIC5.22□□□□□ -1.57
LTBQ06643 MRPL53P1-201ENST00000414323 319 ntBASIC5.22□□□□□ -1.57
LTBQ06643 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.22□□□□□ -1.57
LTBQ06643 PCNPP4-201ENST00000414817 517 ntBASIC5.22□□□□□ -1.57
LTBQ06643 BX276092.6-201ENST00000430476 250 ntBASIC5.22□□□□□ -1.57
LTBQ06643 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC5.22□□□□□ -1.57
LTBQ06643 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.22□□□□□ -1.57
LTBQ06643 AC099063.2-201ENST00000446360 662 ntBASIC5.22□□□□□ -1.57
LTBQ06643 THAP12P8-201ENST00000447914 2115 ntBASIC5.22□□□□□ -1.57
LTBQ06643 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC5.22□□□□□ -1.57
LTBQ06643 BX276092.8-201ENST00000455722 250 ntBASIC5.22□□□□□ -1.57
LTBQ06643 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
LTBQ06643 RN7SL57P-201ENST00000493687 290 ntBASIC5.22□□□□□ -1.57
LTBQ06643 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.22□□□□□ -1.57
LTBQ06643 AC105384.2-201ENST00000508433 640 ntBASIC5.22□□□□□ -1.57
LTBQ06643 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC5.22□□□□□ -1.57
LTBQ06643 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC5.22□□□□□ -1.57
LTBQ06643 SETP21-201ENST00000514799 892 ntBASIC5.22□□□□□ -1.57
LTBQ06643 SCARNA18.1-201ENST00000516330 83 ntBASIC5.22□□□□□ -1.57
LTBQ06643 AC139365.2-201ENST00000517972 253 ntBASIC5.22□□□□□ -1.57
LTBQ06643 WBP1LP3-201ENST00000523033 208 ntBASIC5.22□□□□□ -1.57
LTBQ06643 OR7E13P-201ENST00000526052 910 ntBASIC5.22□□□□□ -1.57
LTBQ06643 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC5.22□□□□□ -1.57
LTBQ06643 VBP1-203ENST00000535916 944 ntTSL 2 BASIC5.22□□□□□ -1.57
LTBQ06643 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.22□□□□□ -1.57
LTBQ06643 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC5.22□□□□□ -1.57
LTBQ06643 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC5.22□□□□□ -1.57
LTBQ06643 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC5.22□□□□□ -1.57
LTBQ06643 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC5.22□□□□□ -1.57
LTBQ06643 AC096996.1-201ENST00000563813 325 ntBASIC5.22□□□□□ -1.57
LTBQ06643 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
LTBQ06643 MIR1269B-201ENST00000580405 75 ntBASIC5.22□□□□□ -1.57
LTBQ06643 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.22□□□□□ -1.57
LTBQ06643 VN1R87P-201ENST00000596706 487 ntBASIC5.22□□□□□ -1.57
LTBQ06643 KATNBL1P5-201ENST00000605015 517 ntBASIC5.22□□□□□ -1.57
LTBQ06643 AC024940.4-201ENST00000605507 246 ntBASIC5.22□□□□□ -1.57
LTBQ06643 RNA5SP439-201ENST00000617595 124 ntBASIC5.22□□□□□ -1.57
LTBQ06643 AC068787.1-201ENST00000623908 691 ntBASIC5.22□□□□□ -1.57
LTBQ06643 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.22□□□□□ -1.57
LTBQ06643 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.22□□□□□ -1.57
LTBQ06643 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
LTBQ06643 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
LTBQ06643 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
LTBQ06643 BX284613.1-201ENST00000452221 1641 ntBASIC5.22□□□□□ -1.57
LTBQ06643 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.22□□□□□ -1.57
LTBQ06643 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
LTBQ06643 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
LTBQ06643 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
LTBQ06643 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
LTBQ06643 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.57
LTBQ06643 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
LTBQ06643 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
LTBQ06643 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.57
LTBQ06643 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.21□□□□□ -1.57
LTBQ06643 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
LTBQ06643 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
LTBQ06643 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.21□□□□□ -1.58
LTBQ06643 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
LTBQ06643 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
LTBQ06643 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
LTBQ06643 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.58
LTBQ06643 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
LTBQ06643 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.21□□□□□ -1.58
LTBQ06643 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
LTBQ06643 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
LTBQ06643 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.21□□□□□ -1.58
LTBQ06643 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.21□□□□□ -1.58
LTBQ06643 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.21□□□□□ -1.58
LTBQ06643 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.21□□□□□ -1.58
LTBQ06643 MIR1203-201ENST00000408812 85 ntBASIC5.21□□□□□ -1.58
LTBQ06643 AL357752.1-201ENST00000412817 349 ntBASIC5.21□□□□□ -1.58
LTBQ06643 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC5.21□□□□□ -1.58
LTBQ06643 BX323845.3-201ENST00000428215 527 ntBASIC5.21□□□□□ -1.58
LTBQ06643 AL512637.2-201ENST00000431287 1256 ntBASIC5.21□□□□□ -1.58
LTBQ06643 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
LTBQ06643 RRM2P4-201ENST00000441721 562 ntBASIC5.21□□□□□ -1.58
LTBQ06643 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC5.21□□□□□ -1.58
LTBQ06643 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC5.21□□□□□ -1.58
LTBQ06643 AC073072.2-201ENST00000447425 348 ntBASIC5.21□□□□□ -1.58
LTBQ06643 AL645937.3-201ENST00000453647 936 ntBASIC5.21□□□□□ -1.58
LTBQ06643 RNU1-88P-201ENST00000459274 128 ntBASIC5.21□□□□□ -1.58
LTBQ06643 PRELID3BP6-201ENST00000503839 571 ntBASIC5.21□□□□□ -1.58
LTBQ06643 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC5.21□□□□□ -1.58
LTBQ06643 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC5.21□□□□□ -1.58
LTBQ06643 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.21□□□□□ -1.58
LTBQ06643 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 159.8 ms