Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC5.44□□□□□ -1.54
CDH6P55285 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
CDH6P55285 AC002524.1-201ENST00000411687 547 ntBASIC5.44□□□□□ -1.54
CDH6P55285 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC5.44□□□□□ -1.54
CDH6P55285 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC5.44□□□□□ -1.54
CDH6P55285 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.44□□□□□ -1.54
CDH6P55285 AC013268.2-201ENST00000420753 337 ntBASIC5.44□□□□□ -1.54
CDH6P55285 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.44□□□□□ -1.54
CDH6P55285 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
CDH6P55285 AL161722.2-201ENST00000434731 981 ntBASIC5.44□□□□□ -1.54
CDH6P55285 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC5.44□□□□□ -1.54
CDH6P55285 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.44□□□□□ -1.54
CDH6P55285 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.44□□□□□ -1.54
CDH6P55285 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC5.44□□□□□ -1.54
CDH6P55285 AC006427.1-201ENST00000514359 712 ntBASIC5.44□□□□□ -1.54
CDH6P55285 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CDH6P55285 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CDH6P55285 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC5.44□□□□□ -1.54
CDH6P55285 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC5.44□□□□□ -1.54
CDH6P55285 AC092747.4-201ENST00000620519 1861 ntBASIC5.44□□□□□ -1.54
CDH6P55285 IPO5-229ENST00000631030 192 ntTSL 5 BASIC5.44□□□□□ -1.54
CDH6P55285 AC004158.1-201ENST00000564508 4319 ntBASIC5.44□□□□□ -1.54
CDH6P55285 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
CDH6P55285 MTCO1P46-201ENST00000451639 1491 ntBASIC5.44□□□□□ -1.54
CDH6P55285 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
CDH6P55285 AC022417.1-201ENST00000624768 1303 ntBASIC5.44□□□□□ -1.54
CDH6P55285 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CDH6P55285 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CDH6P55285 DDX18P6-201ENST00000450119 1997 ntBASIC5.44□□□□□ -1.54
CDH6P55285 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CDH6P55285 AC006210.2-201ENST00000367074 1545 ntBASIC5.43□□□□□ -1.54
CDH6P55285 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.43□□□□□ -1.54
CDH6P55285 TRIM51GP-201ENST00000534741 1350 ntBASIC5.43□□□□□ -1.54
CDH6P55285 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
CDH6P55285 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.43□□□□□ -1.54
CDH6P55285 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CDH6P55285 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
CDH6P55285 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.43□□□□□ -1.54
CDH6P55285 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.43□□□□□ -1.54
CDH6P55285 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
CDH6P55285 U3.7-201ENST00000363668 216 ntBASIC5.43□□□□□ -1.54
CDH6P55285 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC5.43□□□□□ -1.54
CDH6P55285 OR8V1P-201ENST00000395193 873 ntBASIC5.43□□□□□ -1.54
CDH6P55285 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.43□□□□□ -1.54
CDH6P55285 RN7SKP59-201ENST00000410520 314 ntBASIC5.43□□□□□ -1.54
CDH6P55285 COX5BP7-201ENST00000414780 274 ntBASIC5.43□□□□□ -1.54
CDH6P55285 RPL7P6-201ENST00000480903 738 ntBASIC5.43□□□□□ -1.54
CDH6P55285 NPM1P28-201ENST00000492269 840 ntBASIC5.43□□□□□ -1.54
CDH6P55285 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CDH6P55285 RN7SKP5-201ENST00000517045 272 ntBASIC5.43□□□□□ -1.54
CDH6P55285 IGKV2-18-201ENST00000522607 343 ntBASIC5.43□□□□□ -1.54
CDH6P55285 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.43□□□□□ -1.54
CDH6P55285 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.43□□□□□ -1.54
CDH6P55285 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.43□□□□□ -1.54
CDH6P55285 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CDH6P55285 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CDH6P55285 AC006363.1-201ENST00000603806 463 ntBASIC5.43□□□□□ -1.54
CDH6P55285 AC136428.4-201ENST00000634254 1155 ntBASIC5.43□□□□□ -1.54
CDH6P55285 METTL15-211ENST00000634762 718 ntTSL 5 BASIC5.43□□□□□ -1.54
CDH6P55285 CASC19-264ENST00000641912 1184 ntBASIC5.43□□□□□ -1.54
CDH6P55285 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
CDH6P55285 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
CDH6P55285 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CDH6P55285 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CDH6P55285 Z95331.1-201ENST00000623075 23112 ntBASIC5.43□□□□□ -1.54
CDH6P55285 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
CDH6P55285 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
CDH6P55285 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CDH6P55285 AC019072.1-201ENST00000604535 1551 ntBASIC5.42□□□□□ -1.54
CDH6P55285 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
CDH6P55285 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.42□□□□□ -1.54
CDH6P55285 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
CDH6P55285 RNA5SP183-201ENST00000362452 119 ntBASIC5.42□□□□□ -1.54
CDH6P55285 RNU6-249P-201ENST00000363016 102 ntBASIC5.42□□□□□ -1.54
CDH6P55285 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CDH6P55285 RNU1-74P-201ENST00000384108 171 ntBASIC5.42□□□□□ -1.54
CDH6P55285 RPL21P67-201ENST00000402896 478 ntBASIC5.42□□□□□ -1.54
CDH6P55285 NPM1P4-201ENST00000414095 812 ntBASIC5.42□□□□□ -1.54
CDH6P55285 PCNPP4-201ENST00000414817 517 ntBASIC5.42□□□□□ -1.54
CDH6P55285 RPL7L1P9-201ENST00000431298 745 ntBASIC5.42□□□□□ -1.54
CDH6P55285 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC5.42□□□□□ -1.54
CDH6P55285 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.42□□□□□ -1.54
CDH6P55285 NPM1P48-201ENST00000436002 853 ntBASIC5.42□□□□□ -1.54
CDH6P55285 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5.42□□□□□ -1.54
CDH6P55285 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.42□□□□□ -1.54
CDH6P55285 BX842559.2-201ENST00000451418 605 ntBASIC5.42□□□□□ -1.54
CDH6P55285 RPL7P39-201ENST00000481157 744 ntBASIC5.42□□□□□ -1.54
CDH6P55285 AC091544.1-201ENST00000484702 348 ntBASIC5.42□□□□□ -1.54
CDH6P55285 EIF3LP3-201ENST00000495197 822 ntBASIC5.42□□□□□ -1.54
CDH6P55285 RPL7L1P4-201ENST00000513004 707 ntBASIC5.42□□□□□ -1.54
CDH6P55285 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.42□□□□□ -1.54
CDH6P55285 AC100784.1-201ENST00000522790 310 ntBASIC5.42□□□□□ -1.54
CDH6P55285 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC5.42□□□□□ -1.54
CDH6P55285 ASB8-215ENST00000540782 659 ntTSL 3 BASIC5.42□□□□□ -1.54
CDH6P55285 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC5.42□□□□□ -1.54
CDH6P55285 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.42□□□□□ -1.54
CDH6P55285 AL049779.2-201ENST00000553847 315 ntBASIC5.42□□□□□ -1.54
CDH6P55285 AC040958.1-201ENST00000561102 201 ntBASIC5.42□□□□□ -1.54
CDH6P55285 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CDH6P55285 AC109309.2-201ENST00000612597 332 ntBASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms