Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC6.29□□□□□ -1.4
NUP98P52948 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC6.29□□□□□ -1.4
NUP98P52948 IGKV1-32-201ENST00000519290 311 ntBASIC6.29□□□□□ -1.4
NUP98P52948 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC6.29□□□□□ -1.4
NUP98P52948 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC6.29□□□□□ -1.4
NUP98P52948 BGLT3-201ENST00000564523 994 ntBASIC6.29□□□□□ -1.4
NUP98P52948 MTCYBP13-201ENST00000578634 1093 ntBASIC6.29□□□□□ -1.4
NUP98P52948 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC6.29□□□□□ -1.4
NUP98P52948 RNF123-214ENST00000629802 207 ntTSL 5 BASIC6.29□□□□□ -1.4
NUP98P52948 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
NUP98P52948 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
NUP98P52948 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
NUP98P52948 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
NUP98P52948 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
NUP98P52948 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
NUP98P52948 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC6.28□□□□□ -1.4
NUP98P52948 ECM1P2-201ENST00000503354 1577 ntBASIC6.28□□□□□ -1.4
NUP98P52948 Z95114.1-201ENST00000624264 14574 ntBASIC6.28□□□□□ -1.4
NUP98P52948 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC6.28□□□□□ -1.4
NUP98P52948 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
NUP98P52948 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC6.28□□□□□ -1.4
NUP98P52948 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
NUP98P52948 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC6.28□□□□□ -1.4
NUP98P52948 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC6.28□□□□□ -1.4
NUP98P52948 RNA5SP223-201ENST00000365174 120 ntBASIC6.28□□□□□ -1.4
NUP98P52948 RNU6-398P-201ENST00000384143 109 ntBASIC6.28□□□□□ -1.4
NUP98P52948 MIR589-201ENST00000385238 99 ntBASIC6.28□□□□□ -1.4
NUP98P52948 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC6.28□□□□□ -1.4
NUP98P52948 CYCSP11-201ENST00000436426 315 ntBASIC6.28□□□□□ -1.4
NUP98P52948 AURKAPS2-201ENST00000454983 333 ntBASIC6.28□□□□□ -1.4
NUP98P52948 AL672167.3-201ENST00000465951 960 ntBASIC6.28□□□□□ -1.4
NUP98P52948 RN7SL354P-201ENST00000469282 294 ntBASIC6.28□□□□□ -1.4
NUP98P52948 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC6.28□□□□□ -1.4
NUP98P52948 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC6.28□□□□□ -1.4
NUP98P52948 AC012339.2-201ENST00000523996 453 ntBASIC6.28□□□□□ -1.4
NUP98P52948 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC6.28□□□□□ -1.4
NUP98P52948 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
NUP98P52948 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC6.28□□□□□ -1.4
NUP98P52948 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
NUP98P52948 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC6.28□□□□□ -1.4
NUP98P52948 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
NUP98P52948 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
NUP98P52948 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
NUP98P52948 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC6.28□□□□□ -1.4
NUP98P52948 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC6.28□□□□□ -1.4
NUP98P52948 AC010928.1-201ENST00000592477 1447 ntBASIC6.28□□□□□ -1.4
NUP98P52948 AL132640.2-201ENST00000559968 1698 ntBASIC6.28□□□□□ -1.4
NUP98P52948 RMST-209ENST00000639542 3269 ntTSL 5 BASIC6.27□□□□□ -1.4
NUP98P52948 MSL3P1-202ENST00000440028 1468 ntBASIC6.27□□□□□ -1.4
NUP98P52948 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
NUP98P52948 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
NUP98P52948 MTND2P40-201ENST00000436718 841 ntBASIC6.27□□□□□ -1.41
NUP98P52948 RN7SL189P-201ENST00000468631 289 ntBASIC6.27□□□□□ -1.41
NUP98P52948 AC022133.1-201ENST00000490961 571 ntBASIC6.27□□□□□ -1.41
NUP98P52948 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC6.27□□□□□ -1.41
NUP98P52948 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
NUP98P52948 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
NUP98P52948 NLN-202ENST00000502464 8354 ntTSL 5 BASIC6.27□□□□□ -1.41
NUP98P52948 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
NUP98P52948 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
NUP98P52948 AC063976.2-201ENST00000425667 3556 ntBASIC6.27□□□□□ -1.41
NUP98P52948 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC6.27□□□□□ -1.41
NUP98P52948 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC6.27□□□□□ -1.41
NUP98P52948 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6.27□□□□□ -1.41
NUP98P52948 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
NUP98P52948 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC6.27□□□□□ -1.41
NUP98P52948 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
NUP98P52948 SNORA70.6-201ENST00000383934 134 ntBASIC6.27□□□□□ -1.41
NUP98P52948 RNA5SP332-201ENST00000391063 115 ntBASIC6.27□□□□□ -1.41
NUP98P52948 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
NUP98P52948 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC6.27□□□□□ -1.41
NUP98P52948 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC6.27□□□□□ -1.41
NUP98P52948 AC138761.5-201ENST00000433967 325 ntBASIC6.27□□□□□ -1.41
NUP98P52948 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC6.27□□□□□ -1.41
NUP98P52948 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC6.27□□□□□ -1.41
NUP98P52948 AL356390.1-201ENST00000455684 397 ntBASIC6.27□□□□□ -1.41
NUP98P52948 RN7SL197P-201ENST00000466981 299 ntBASIC6.27□□□□□ -1.41
NUP98P52948 SSR3-206ENST00000476217 807 ntTSL 3 BASIC6.27□□□□□ -1.41
NUP98P52948 RN7SL319P-201ENST00000480656 221 ntBASIC6.27□□□□□ -1.41
NUP98P52948 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC6.27□□□□□ -1.41
NUP98P52948 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
NUP98P52948 FAM174B-202ENST00000553393 495 ntTSL 2 BASIC6.27□□□□□ -1.41
NUP98P52948 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC6.27□□□□□ -1.41
NUP98P52948 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
NUP98P52948 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
NUP98P52948 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC6.27□□□□□ -1.41
NUP98P52948 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
NUP98P52948 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
NUP98P52948 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
NUP98P52948 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC6.26□□□□□ -1.41
NUP98P52948 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
NUP98P52948 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
NUP98P52948 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
NUP98P52948 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.26□□□□□ -1.41
NUP98P52948 ERVFRD-3-201ENST00000578561 1617 ntBASIC6.26□□□□□ -1.41
NUP98P52948 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
NUP98P52948 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
NUP98P52948 AC092017.2-201ENST00000427600 362 ntBASIC6.26□□□□□ -1.41
NUP98P52948 TEX41-206ENST00000432608 661 ntTSL 3 BASIC6.26□□□□□ -1.41
NUP98P52948 NRBF2P3-201ENST00000432731 865 ntBASIC6.26□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms