Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 AL136228.1-201ENST00000622221 319 ntBASIC6.1□□□□□ -1.43
NEK3P51956 AC090772.4-201ENST00000623599 362 ntBASIC6.1□□□□□ -1.43
NEK3P51956 AC129915.3-201ENST00000634128 948 ntBASIC6.1□□□□□ -1.43
NEK3P51956 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
NEK3P51956 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
NEK3P51956 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
NEK3P51956 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
NEK3P51956 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC6.1□□□□□ -1.43
NEK3P51956 TTC39DP-201ENST00000416781 1688 ntBASIC6.1□□□□□ -1.43
NEK3P51956 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
NEK3P51956 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
NEK3P51956 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
NEK3P51956 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
NEK3P51956 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
NEK3P51956 AC092079.1-201ENST00000558620 1985 ntBASIC6.09□□□□□ -1.43
NEK3P51956 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC6.09□□□□□ -1.43
NEK3P51956 AL355488.2-201ENST00000609909 2850 ntBASIC6.09□□□□□ -1.43
NEK3P51956 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
NEK3P51956 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC6.09□□□□□ -1.43
NEK3P51956 AC017007.4-201ENST00000503353 1352 ntBASIC6.09□□□□□ -1.43
NEK3P51956 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
NEK3P51956 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
NEK3P51956 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC6.09□□□□□ -1.43
NEK3P51956 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
NEK3P51956 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
NEK3P51956 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC6.09□□□□□ -1.43
NEK3P51956 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
NEK3P51956 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
NEK3P51956 RNA5SP273-201ENST00000362484 113 ntBASIC6.09□□□□□ -1.43
NEK3P51956 U3.10-201ENST00000364459 214 ntBASIC6.09□□□□□ -1.43
NEK3P51956 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.09□□□□□ -1.43
NEK3P51956 AC234772.1-201ENST00000377927 937 ntBASIC6.09□□□□□ -1.43
NEK3P51956 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
NEK3P51956 ATF1P1-201ENST00000406040 927 ntBASIC6.09□□□□□ -1.43
NEK3P51956 HMGB3P31-201ENST00000413333 595 ntBASIC6.09□□□□□ -1.43
NEK3P51956 VTA1P1-201ENST00000414044 866 ntBASIC6.09□□□□□ -1.43
NEK3P51956 GAS5-202ENST00000414075 413 ntTSL 2 BASIC6.09□□□□□ -1.43
NEK3P51956 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC6.09□□□□□ -1.43
NEK3P51956 TRGV6-201ENST00000417928 299 ntBASIC6.09□□□□□ -1.43
NEK3P51956 RPS3P2-201ENST00000421346 701 ntBASIC6.09□□□□□ -1.43
NEK3P51956 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC6.09□□□□□ -1.43
NEK3P51956 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6.09□□□□□ -1.43
NEK3P51956 RPS29P14-201ENST00000431518 171 ntBASIC6.09□□□□□ -1.43
NEK3P51956 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC6.09□□□□□ -1.43
NEK3P51956 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC6.09□□□□□ -1.43
NEK3P51956 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
NEK3P51956 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC6.09□□□□□ -1.43
NEK3P51956 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC6.09□□□□□ -1.43
NEK3P51956 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
NEK3P51956 AC083795.1-201ENST00000491760 320 ntBASIC6.09□□□□□ -1.43
NEK3P51956 CAB39P1-201ENST00000502277 460 ntBASIC6.09□□□□□ -1.43
NEK3P51956 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC6.09□□□□□ -1.43
NEK3P51956 AC006499.4-201ENST00000510947 694 ntBASIC6.09□□□□□ -1.43
NEK3P51956 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
NEK3P51956 Y_RNA.667-201ENST00000516212 107 ntBASIC6.09□□□□□ -1.43
NEK3P51956 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC6.09□□□□□ -1.43
NEK3P51956 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC6.09□□□□□ -1.43
NEK3P51956 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC6.09□□□□□ -1.43
NEK3P51956 CETN3-206ENST00000522864 738 ntTSL 3 BASIC6.09□□□□□ -1.43
NEK3P51956 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC6.09□□□□□ -1.43
NEK3P51956 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC6.09□□□□□ -1.43
NEK3P51956 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
NEK3P51956 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC6.09□□□□□ -1.43
NEK3P51956 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC6.09□□□□□ -1.43
NEK3P51956 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC6.09□□□□□ -1.43
NEK3P51956 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC6.09□□□□□ -1.43
NEK3P51956 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC6.09□□□□□ -1.43
NEK3P51956 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC6.09□□□□□ -1.43
NEK3P51956 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC6.09□□□□□ -1.43
NEK3P51956 MIR6793-201ENST00000612376 63 ntBASIC6.09□□□□□ -1.43
NEK3P51956 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC6.09□□□□□ -1.43
NEK3P51956 AL357562.1-201ENST00000624911 609 ntBASIC6.09□□□□□ -1.43
NEK3P51956 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC6.09□□□□□ -1.43
NEK3P51956 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC6.09□□□□□ -1.43
NEK3P51956 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
NEK3P51956 AC093671.1-201ENST00000624981 2929 ntBASIC6.09□□□□□ -1.43
NEK3P51956 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC6.09□□□□□ -1.43
NEK3P51956 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
NEK3P51956 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
NEK3P51956 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
NEK3P51956 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC6.09□□□□□ -1.43
NEK3P51956 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC6.09□□□□□ -1.44
NEK3P51956 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
NEK3P51956 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
NEK3P51956 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC6.08□□□□□ -1.44
NEK3P51956 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
NEK3P51956 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
NEK3P51956 RBPJP7-201ENST00000442803 1447 ntBASIC6.08□□□□□ -1.44
NEK3P51956 RBPJP5-201ENST00000449433 1447 ntBASIC6.08□□□□□ -1.44
NEK3P51956 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC6.08□□□□□ -1.44
NEK3P51956 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
NEK3P51956 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
NEK3P51956 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
NEK3P51956 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
NEK3P51956 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
NEK3P51956 AL132640.2-201ENST00000559968 1698 ntBASIC6.08□□□□□ -1.44
NEK3P51956 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6.08□□□□□ -1.44
NEK3P51956 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
NEK3P51956 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
NEK3P51956 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms