Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 RNA5SP187-201ENST00000384400 119 ntBASIC5.31□□□□□ -1.56
CENPAP49450 MIR122-201ENST00000385044 85 ntBASIC5.31□□□□□ -1.56
CENPAP49450 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CENPAP49450 AL034417.1-201ENST00000399343 800 ntBASIC5.31□□□□□ -1.56
CENPAP49450 RNA5SP198-201ENST00000410376 127 ntBASIC5.31□□□□□ -1.56
CENPAP49450 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC5.31□□□□□ -1.56
CENPAP49450 AL024507.1-201ENST00000412741 274 ntBASIC5.31□□□□□ -1.56
CENPAP49450 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC5.31□□□□□ -1.56
CENPAP49450 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.31□□□□□ -1.56
CENPAP49450 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC5.31□□□□□ -1.56
CENPAP49450 AC092865.3-201ENST00000425390 1026 ntBASIC5.31□□□□□ -1.56
CENPAP49450 CRIP1P1-201ENST00000427567 185 ntBASIC5.31□□□□□ -1.56
CENPAP49450 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC5.31□□□□□ -1.56
CENPAP49450 AC096775.1-201ENST00000437724 448 ntBASIC5.31□□□□□ -1.56
CENPAP49450 FTLP8-201ENST00000446770 267 ntBASIC5.31□□□□□ -1.56
CENPAP49450 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC5.31□□□□□ -1.56
CENPAP49450 KF459542.1-201ENST00000450908 553 ntBASIC5.31□□□□□ -1.56
CENPAP49450 RNU1-88P-201ENST00000459274 128 ntBASIC5.31□□□□□ -1.56
CENPAP49450 AC092691.2-201ENST00000461787 803 ntBASIC5.31□□□□□ -1.56
CENPAP49450 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
CENPAP49450 OR7E22P-201ENST00000478335 1035 ntBASIC5.31□□□□□ -1.56
CENPAP49450 CR383658.1-201ENST00000514609 734 ntBASIC5.31□□□□□ -1.56
CENPAP49450 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CENPAP49450 AC036111.2-201ENST00000533247 901 ntBASIC5.31□□□□□ -1.56
CENPAP49450 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.31□□□□□ -1.56
CENPAP49450 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC5.31□□□□□ -1.56
CENPAP49450 MT1CP-201ENST00000567054 174 ntBASIC5.31□□□□□ -1.56
CENPAP49450 AC090826.1-203ENST00000569235 490 ntBASIC5.31□□□□□ -1.56
CENPAP49450 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC5.31□□□□□ -1.56
CENPAP49450 STARD6-202ENST00000577499 696 ntTSL 2 BASIC5.31□□□□□ -1.56
CENPAP49450 RN7SL230P-201ENST00000580835 303 ntBASIC5.31□□□□□ -1.56
CENPAP49450 CBX3P2-202ENST00000583365 535 ntBASIC5.31□□□□□ -1.56
CENPAP49450 AP001357.1-201ENST00000586304 1053 ntBASIC5.31□□□□□ -1.56
CENPAP49450 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC5.31□□□□□ -1.56
CENPAP49450 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC5.31□□□□□ -1.56
CENPAP49450 AC025857.2-201ENST00000602711 238 ntBASIC5.31□□□□□ -1.56
CENPAP49450 AC096947.1-201ENST00000603233 470 ntBASIC5.31□□□□□ -1.56
CENPAP49450 AC005034.4-201ENST00000603612 899 ntBASIC5.31□□□□□ -1.56
CENPAP49450 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.31□□□□□ -1.56
CENPAP49450 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC5.31□□□□□ -1.56
CENPAP49450 AL133481.2-203ENST00000607558 139 ntBASIC5.31□□□□□ -1.56
CENPAP49450 AC090912.3-201ENST00000609775 533 ntBASIC5.31□□□□□ -1.56
CENPAP49450 AC008759.3-201ENST00000613300 508 ntBASIC5.31□□□□□ -1.56
CENPAP49450 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC5.31□□□□□ -1.56
CENPAP49450 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
CENPAP49450 AL512652.1-201ENST00000619006 500 ntBASIC5.31□□□□□ -1.56
CENPAP49450 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CENPAP49450 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CENPAP49450 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.31□□□□□ -1.56
CENPAP49450 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.31□□□□□ -1.56
CENPAP49450 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CENPAP49450 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.31□□□□□ -1.56
CENPAP49450 MAPK10-328ENST00000641553 4009 ntBASIC5.31□□□□□ -1.56
CENPAP49450 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CENPAP49450 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CENPAP49450 AC132825.1-201ENST00000463573 2247 ntBASIC5.31□□□□□ -1.56
CENPAP49450 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CENPAP49450 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
CENPAP49450 GNL2P1-201ENST00000451274 2190 ntBASIC5.31□□□□□ -1.56
CENPAP49450 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.3□□□□□ -1.56
CENPAP49450 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CENPAP49450 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.3□□□□□ -1.56
CENPAP49450 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC5.3□□□□□ -1.56
CENPAP49450 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.3□□□□□ -1.56
CENPAP49450 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CENPAP49450 AC079298.1-201ENST00000625026 1619 ntBASIC5.3□□□□□ -1.56
CENPAP49450 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CENPAP49450 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CENPAP49450 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
CENPAP49450 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CENPAP49450 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC5.3□□□□□ -1.56
CENPAP49450 SNORA5.1-201ENST00000384275 131 ntBASIC5.3□□□□□ -1.56
CENPAP49450 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.3□□□□□ -1.56
CENPAP49450 RPS26P13-201ENST00000419030 330 ntBASIC5.3□□□□□ -1.56
CENPAP49450 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.3□□□□□ -1.56
CENPAP49450 VN1R42P-201ENST00000424651 344 ntBASIC5.3□□□□□ -1.56
CENPAP49450 AC099782.1-201ENST00000425889 474 ntBASIC5.3□□□□□ -1.56
CENPAP49450 VN1R21P-201ENST00000426703 765 ntBASIC5.3□□□□□ -1.56
CENPAP49450 AC013262.1-201ENST00000426710 252 ntBASIC5.3□□□□□ -1.56
CENPAP49450 AC108479.1-201ENST00000431142 427 ntBASIC5.3□□□□□ -1.56
CENPAP49450 BX119904.1-201ENST00000432026 348 ntBASIC5.3□□□□□ -1.56
CENPAP49450 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CENPAP49450 CEACAMP11-201ENST00000455211 583 ntBASIC5.3□□□□□ -1.56
CENPAP49450 SETP6-201ENST00000479329 568 ntBASIC5.3□□□□□ -1.56
CENPAP49450 RN7SL809P-201ENST00000482040 297 ntBASIC5.3□□□□□ -1.56
CENPAP49450 AC008629.2-201ENST00000503783 483 ntBASIC5.3□□□□□ -1.56
CENPAP49450 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC5.3□□□□□ -1.56
CENPAP49450 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC5.3□□□□□ -1.56
CENPAP49450 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC5.3□□□□□ -1.56
CENPAP49450 NACAP5-201ENST00000509863 636 ntBASIC5.3□□□□□ -1.56
CENPAP49450 AC110760.3-202ENST00000515177 371 ntBASIC5.3□□□□□ -1.56
CENPAP49450 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.3□□□□□ -1.56
CENPAP49450 AC078899.1-201ENST00000521432 1185 ntBASIC5.3□□□□□ -1.56
CENPAP49450 AC136777.2-201ENST00000522979 358 ntBASIC5.3□□□□□ -1.56
CENPAP49450 HAUS1P3-201ENST00000523909 662 ntBASIC5.3□□□□□ -1.56
CENPAP49450 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC5.3□□□□□ -1.56
CENPAP49450 RAB30-209ENST00000532548 644 ntTSL 3 BASIC5.3□□□□□ -1.56
CENPAP49450 BTG1P1-201ENST00000540396 508 ntBASIC5.3□□□□□ -1.56
CENPAP49450 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC5.3□□□□□ -1.56
CENPAP49450 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms