Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 AC007204.1-201ENST00000621794 555 ntBASIC5.17□□□□□ -1.58
SOX2P48431 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC5.17□□□□□ -1.58
SOX2P48431 AC139713.2-210ENST00000641741 992 ntBASIC5.17□□□□□ -1.58
SOX2P48431 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
SOX2P48431 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
SOX2P48431 AC117409.1-201ENST00000470499 1310 ntBASIC5.17□□□□□ -1.58
SOX2P48431 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SOX2P48431 MTCO1P7-201ENST00000419523 1542 ntBASIC5.17□□□□□ -1.58
SOX2P48431 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
SOX2P48431 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.17□□□□□ -1.58
SOX2P48431 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
SOX2P48431 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SOX2P48431 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SOX2P48431 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SOX2P48431 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
SOX2P48431 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
SOX2P48431 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SOX2P48431 MTCO1P18-201ENST00000455518 1419 ntBASIC5.16□□□□□ -1.58
SOX2P48431 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.16□□□□□ -1.58
SOX2P48431 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SOX2P48431 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SOX2P48431 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SOX2P48431 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SOX2P48431 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
SOX2P48431 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
SOX2P48431 AC087752.1-201ENST00000391360 558 ntBASIC5.16□□□□□ -1.58
SOX2P48431 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC5.16□□□□□ -1.58
SOX2P48431 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC5.16□□□□□ -1.58
SOX2P48431 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC5.16□□□□□ -1.58
SOX2P48431 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC5.16□□□□□ -1.58
SOX2P48431 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC5.16□□□□□ -1.58
SOX2P48431 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC5.16□□□□□ -1.58
SOX2P48431 KRR1P1-201ENST00000419430 803 ntBASIC5.16□□□□□ -1.58
SOX2P48431 AC023128.2-201ENST00000420880 1223 ntBASIC5.16□□□□□ -1.58
SOX2P48431 AC010099.3-201ENST00000423896 409 ntBASIC5.16□□□□□ -1.58
SOX2P48431 AC099677.3-201ENST00000427081 395 ntBASIC5.16□□□□□ -1.58
SOX2P48431 MTND5P25-201ENST00000430499 799 ntBASIC5.16□□□□□ -1.58
SOX2P48431 RPL7P34-201ENST00000433316 712 ntBASIC5.16□□□□□ -1.58
SOX2P48431 AC096632.2-201ENST00000438139 1239 ntBASIC5.16□□□□□ -1.58
SOX2P48431 AC092601.1-201ENST00000444526 383 ntBASIC5.16□□□□□ -1.58
SOX2P48431 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC5.16□□□□□ -1.58
SOX2P48431 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.16□□□□□ -1.58
SOX2P48431 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC5.16□□□□□ -1.58
SOX2P48431 PTGES3P5-201ENST00000455109 434 ntBASIC5.16□□□□□ -1.58
SOX2P48431 AC087672.1-201ENST00000479876 766 ntBASIC5.16□□□□□ -1.58
SOX2P48431 AC098583.1-201ENST00000480875 255 ntBASIC5.16□□□□□ -1.58
SOX2P48431 RPS7P11-201ENST00000484240 586 ntBASIC5.16□□□□□ -1.58
SOX2P48431 AC079203.1-201ENST00000487972 404 ntBASIC5.16□□□□□ -1.58
SOX2P48431 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC5.16□□□□□ -1.58
SOX2P48431 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC5.16□□□□□ -1.58
SOX2P48431 AC122714.1-201ENST00000502510 459 ntBASIC5.16□□□□□ -1.58
SOX2P48431 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SOX2P48431 MGST2-204ENST00000506797 634 ntTSL 2 BASIC5.16□□□□□ -1.58
SOX2P48431 AC093325.1-201ENST00000508378 326 ntBASIC5.16□□□□□ -1.58
SOX2P48431 NDUFS5P6-201ENST00000529136 295 ntBASIC5.16□□□□□ -1.58
SOX2P48431 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC5.16□□□□□ -1.58
SOX2P48431 AC087897.1-201ENST00000550134 156 ntBASIC5.16□□□□□ -1.58
SOX2P48431 AC126615.2-201ENST00000553003 515 ntBASIC5.16□□□□□ -1.58
SOX2P48431 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC5.16□□□□□ -1.58
SOX2P48431 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.16□□□□□ -1.58
SOX2P48431 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.16□□□□□ -1.58
SOX2P48431 AC007346.1-201ENST00000569208 867 ntBASIC5.16□□□□□ -1.58
SOX2P48431 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC5.16□□□□□ -1.58
SOX2P48431 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC5.16□□□□□ -1.58
SOX2P48431 PCNAP1-202ENST00000595299 752 ntBASIC5.16□□□□□ -1.58
SOX2P48431 AL591222.2-201ENST00000604443 754 ntBASIC5.16□□□□□ -1.58
SOX2P48431 IGKV2OR2-1-201ENST00000605129 304 ntBASIC5.16□□□□□ -1.58
SOX2P48431 AL645933.2-201ENST00000606743 1207 ntBASIC5.16□□□□□ -1.58
SOX2P48431 AC024060.1-201ENST00000607052 494 ntBASIC5.16□□□□□ -1.58
SOX2P48431 FAM72A-208ENST00000607379 1139 ntBASIC5.16□□□□□ -1.58
SOX2P48431 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC5.16□□□□□ -1.58
SOX2P48431 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC5.16□□□□□ -1.58
SOX2P48431 AP003485.2-201ENST00000623636 610 ntBASIC5.16□□□□□ -1.58
SOX2P48431 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.16□□□□□ -1.58
SOX2P48431 AC090897.3-201ENST00000636973 1157 ntBASIC5.16□□□□□ -1.58
SOX2P48431 AC073869.7-201ENST00000640874 297 ntBASIC5.16□□□□□ -1.58
SOX2P48431 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
SOX2P48431 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.16□□□□□ -1.58
SOX2P48431 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SOX2P48431 MTCO1P15-201ENST00000529569 1526 ntBASIC5.16□□□□□ -1.58
SOX2P48431 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SOX2P48431 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SOX2P48431 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.16□□□□□ -1.58
SOX2P48431 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SOX2P48431 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5.16□□□□□ -1.58
SOX2P48431 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
SOX2P48431 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
SOX2P48431 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
SOX2P48431 RBMY1HP-201ENST00000382759 1389 ntBASIC5.16□□□□□ -1.58
SOX2P48431 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SOX2P48431 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SOX2P48431 AP004607.3-201ENST00000530354 3915 ntBASIC5.16□□□□□ -1.58
SOX2P48431 CAP1P2-201ENST00000417455 1409 ntBASIC5.15□□□□□ -1.58
SOX2P48431 ING3-204ENST00000431467 1447 ntTSL 2 BASIC5.15□□□□□ -1.58
SOX2P48431 AL158152.1-201ENST00000602652 1435 ntBASIC5.15□□□□□ -1.58
SOX2P48431 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
SOX2P48431 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
SOX2P48431 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
SOX2P48431 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.58
SOX2P48431 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.15□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms