Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.7□□□□□ -1.5
HADHAP40939 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.7□□□□□ -1.5
HADHAP40939 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
HADHAP40939 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HADHAP40939 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.7□□□□□ -1.5
HADHAP40939 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HADHAP40939 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
HADHAP40939 AC007938.2-201ENST00000604666 2634 ntBASIC5.7□□□□□ -1.5
HADHAP40939 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HADHAP40939 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
HADHAP40939 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
HADHAP40939 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
HADHAP40939 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
HADHAP40939 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
HADHAP40939 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HADHAP40939 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HADHAP40939 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.69□□□□□ -1.5
HADHAP40939 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
HADHAP40939 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HADHAP40939 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HADHAP40939 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HADHAP40939 RN7SKP81-201ENST00000365603 331 ntBASIC5.69□□□□□ -1.5
HADHAP40939 UBE2V1P15-201ENST00000407776 448 ntBASIC5.69□□□□□ -1.5
HADHAP40939 RNA5SP178-201ENST00000410380 128 ntBASIC5.69□□□□□ -1.5
HADHAP40939 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.69□□□□□ -1.5
HADHAP40939 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.69□□□□□ -1.5
HADHAP40939 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC5.69□□□□□ -1.5
HADHAP40939 MED28P3-201ENST00000444288 531 ntBASIC5.69□□□□□ -1.5
HADHAP40939 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.69□□□□□ -1.5
HADHAP40939 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.69□□□□□ -1.5
HADHAP40939 CALM1P2-201ENST00000452941 448 ntBASIC5.69□□□□□ -1.5
HADHAP40939 RPS3AP15-201ENST00000483874 781 ntBASIC5.69□□□□□ -1.5
HADHAP40939 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.69□□□□□ -1.5
HADHAP40939 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC5.69□□□□□ -1.5
HADHAP40939 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.69□□□□□ -1.5
HADHAP40939 AC021087.2-201ENST00000504656 1203 ntBASIC5.69□□□□□ -1.5
HADHAP40939 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC5.69□□□□□ -1.5
HADHAP40939 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.69□□□□□ -1.5
HADHAP40939 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC5.69□□□□□ -1.5
HADHAP40939 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.69□□□□□ -1.5
HADHAP40939 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.69□□□□□ -1.5
HADHAP40939 IGBP1P1-201ENST00000554337 1009 ntBASIC5.69□□□□□ -1.5
HADHAP40939 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.69□□□□□ -1.5
HADHAP40939 AC027243.2-201ENST00000602530 724 ntBASIC5.69□□□□□ -1.5
HADHAP40939 AC084373.1-201ENST00000603311 235 ntBASIC5.69□□□□□ -1.5
HADHAP40939 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC5.69□□□□□ -1.5
HADHAP40939 AC103703.1-201ENST00000634783 663 ntBASIC5.69□□□□□ -1.5
HADHAP40939 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
HADHAP40939 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
HADHAP40939 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HADHAP40939 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5.69□□□□□ -1.5
HADHAP40939 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.69□□□□□ -1.5
HADHAP40939 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HADHAP40939 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.69□□□□□ -1.5
HADHAP40939 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HADHAP40939 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.69□□□□□ -1.5
HADHAP40939 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HADHAP40939 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
HADHAP40939 MRRFP1-201ENST00000435941 1675 ntBASIC5.69□□□□□ -1.5
HADHAP40939 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.69□□□□□ -1.5
HADHAP40939 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
HADHAP40939 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HADHAP40939 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HADHAP40939 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HADHAP40939 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
HADHAP40939 MT-RNR2-201ENST00000387347 1559 ntBASIC5.68□□□□□ -1.5
HADHAP40939 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.68□□□□□ -1.5
HADHAP40939 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HADHAP40939 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.68□□□□□ -1.5
HADHAP40939 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.68□□□□□ -1.5
HADHAP40939 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HADHAP40939 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HADHAP40939 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC5.68□□□□□ -1.5
HADHAP40939 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC5.68□□□□□ -1.5
HADHAP40939 UGT2B26P-201ENST00000508672 1613 ntBASIC5.68□□□□□ -1.5
HADHAP40939 RN7SKP145-201ENST00000363291 303 ntBASIC5.68□□□□□ -1.5
HADHAP40939 SNORD115-48-201ENST00000364764 76 ntBASIC5.68□□□□□ -1.5
HADHAP40939 AL512422.1-201ENST00000407033 553 ntBASIC5.68□□□□□ -1.5
HADHAP40939 RANP4-201ENST00000413361 655 ntBASIC5.68□□□□□ -1.5
HADHAP40939 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.68□□□□□ -1.5
HADHAP40939 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.68□□□□□ -1.5
HADHAP40939 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC5.68□□□□□ -1.5
HADHAP40939 VTI1BP4-201ENST00000427516 527 ntBASIC5.68□□□□□ -1.5
HADHAP40939 MTND4LP7-201ENST00000431728 294 ntBASIC5.68□□□□□ -1.5
HADHAP40939 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC5.68□□□□□ -1.5
HADHAP40939 HMGB3P24-201ENST00000433260 622 ntBASIC5.68□□□□□ -1.5
HADHAP40939 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.68□□□□□ -1.5
HADHAP40939 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC5.68□□□□□ -1.5
HADHAP40939 AL359265.1-201ENST00000440296 795 ntBASIC5.68□□□□□ -1.5
HADHAP40939 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.68□□□□□ -1.5
HADHAP40939 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.68□□□□□ -1.5
HADHAP40939 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.68□□□□□ -1.5
HADHAP40939 RN7SL188P-201ENST00000469842 285 ntBASIC5.68□□□□□ -1.5
HADHAP40939 RPSAP37-201ENST00000470913 821 ntBASIC5.68□□□□□ -1.5
HADHAP40939 AC087672.1-201ENST00000479876 766 ntBASIC5.68□□□□□ -1.5
HADHAP40939 OR9N1P-202ENST00000494289 481 ntBASIC5.68□□□□□ -1.5
HADHAP40939 SSR3-208ENST00000496050 579 ntTSL 4 BASIC5.68□□□□□ -1.5
HADHAP40939 HMGB1P3-201ENST00000502802 616 ntBASIC5.68□□□□□ -1.5
HADHAP40939 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.68□□□□□ -1.5
HADHAP40939 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms