Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC6.03□□□□□ -1.44
COL4A5P29400 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
COL4A5P29400 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
COL4A5P29400 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC6.03□□□□□ -1.44
COL4A5P29400 AMOT-201ENST00000304758 6888 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
COL4A5P29400 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.44
COL4A5P29400 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.45
COL4A5P29400 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.02□□□□□ -1.45
COL4A5P29400 NIPBL-202ENST00000448238 8729 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
COL4A5P29400 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
COL4A5P29400 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.02□□□□□ -1.45
COL4A5P29400 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
COL4A5P29400 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC6.02□□□□□ -1.45
COL4A5P29400 IGKV7-3-201ENST00000357453 298 ntBASIC6.02□□□□□ -1.45
COL4A5P29400 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
COL4A5P29400 RPL10P17-201ENST00000453852 316 ntBASIC6.02□□□□□ -1.45
COL4A5P29400 PPIAP21-201ENST00000464473 501 ntBASIC6.02□□□□□ -1.45
COL4A5P29400 IGKV2D-10-201ENST00000520194 281 ntBASIC6.02□□□□□ -1.45
COL4A5P29400 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC6.02□□□□□ -1.45
COL4A5P29400 AC079414.3-201ENST00000612986 1090 ntBASIC6.02□□□□□ -1.45
COL4A5P29400 AL138960.1-201ENST00000613838 513 ntBASIC6.02□□□□□ -1.45
COL4A5P29400 MIR6839-201ENST00000620425 113 ntBASIC6.02□□□□□ -1.45
COL4A5P29400 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.02□□□□□ -1.45
COL4A5P29400 TRPS1-203ENST00000395715 9990 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
COL4A5P29400 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC6.02□□□□□ -1.45
COL4A5P29400 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
COL4A5P29400 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
COL4A5P29400 NHLRC2-201ENST00000369301 11051 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
COL4A5P29400 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
COL4A5P29400 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
COL4A5P29400 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
COL4A5P29400 MMS22L-201ENST00000275053 8643 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
COL4A5P29400 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
COL4A5P29400 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
COL4A5P29400 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
COL4A5P29400 DLG2-211ENST00000426717 5927 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
COL4A5P29400 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL4A5P29400 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL4A5P29400 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
COL4A5P29400 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
COL4A5P29400 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL4A5P29400 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC6.01□□□□□ -1.45
COL4A5P29400 RPL21P108-201ENST00000413857 481 ntBASIC6.01□□□□□ -1.45
COL4A5P29400 RPL17P36-201ENST00000420302 549 ntBASIC6.01□□□□□ -1.45
COL4A5P29400 MRPS21P2-201ENST00000424704 264 ntBASIC6.01□□□□□ -1.45
COL4A5P29400 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC6.01□□□□□ -1.45
COL4A5P29400 NPM1P33-201ENST00000438918 872 ntBASIC6.01□□□□□ -1.45
COL4A5P29400 BX679664.2-201ENST00000439282 283 ntBASIC6.01□□□□□ -1.45
COL4A5P29400 RPS17P2-201ENST00000461663 408 ntBASIC6.01□□□□□ -1.45
COL4A5P29400 IMPA1P1-201ENST00000510718 842 ntBASIC6.01□□□□□ -1.45
COL4A5P29400 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
COL4A5P29400 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC6.01□□□□□ -1.45
COL4A5P29400 TVP23CP2-201ENST00000571473 623 ntBASIC6.01□□□□□ -1.45
COL4A5P29400 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC6.01□□□□□ -1.45
COL4A5P29400 AL022401.1-201ENST00000619498 108 ntBASIC6.01□□□□□ -1.45
COL4A5P29400 CDYL2-207ENST00000570137 8159 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL4A5P29400 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.01□□□□□ -1.45
COL4A5P29400 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL4A5P29400 FGFR1OP-202ENST00000366847 14166 ntAPPRIS P4 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL4A5P29400 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC6.01□□□□□ -1.45
COL4A5P29400 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL4A5P29400 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
COL4A5P29400 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL4A5P29400 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
COL4A5P29400 MTCO1P15-201ENST00000529569 1526 ntBASIC6.01□□□□□ -1.45
COL4A5P29400 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL4A5P29400 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
COL4A5P29400 OFD1P8Y-201ENST00000449148 1433 ntBASIC6.01□□□□□ -1.45
COL4A5P29400 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC6.01□□□□□ -1.45
COL4A5P29400 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL4A5P29400 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC6.01□□□□□ -1.45
COL4A5P29400 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
COL4A5P29400 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
COL4A5P29400 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
COL4A5P29400 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC6.01□□□□□ -1.45
COL4A5P29400 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC6.01□□□□□ -1.45
COL4A5P29400 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
COL4A5P29400 KCTD10P1-201ENST00000434203 625 ntBASIC6.01□□□□□ -1.45
COL4A5P29400 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC6.01□□□□□ -1.45
COL4A5P29400 AL136455.1-201ENST00000441083 1240 ntBASIC6.01□□□□□ -1.45
COL4A5P29400 RPL7AP61-201ENST00000443410 636 ntBASIC6.01□□□□□ -1.45
COL4A5P29400 MED28P3-201ENST00000444288 531 ntBASIC6.01□□□□□ -1.45
COL4A5P29400 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC6.01□□□□□ -1.45
COL4A5P29400 AC239367.2-201ENST00000447309 705 ntBASIC6.01□□□□□ -1.45
COL4A5P29400 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC6.01□□□□□ -1.45
COL4A5P29400 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC6.01□□□□□ -1.45
COL4A5P29400 MAL2-201ENST00000522112 573 ntTSL 4 BASIC6.01□□□□□ -1.45
COL4A5P29400 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC6.01□□□□□ -1.45
COL4A5P29400 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC6.01□□□□□ -1.45
COL4A5P29400 AC067959.1-201ENST00000604334 379 ntBASIC6.01□□□□□ -1.45
COL4A5P29400 FTO-223ENST00000640179 210 ntTSL 5 BASIC6.01□□□□□ -1.45
COL4A5P29400 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC6.01□□□□□ -1.45
COL4A5P29400 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
COL4A5P29400 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
COL4A5P29400 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC6□□□□□ -1.45
COL4A5P29400 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC6□□□□□ -1.45
COL4A5P29400 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC6□□□□□ -1.45
COL4A5P29400 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
COL4A5P29400 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC6□□□□□ -1.45
COL4A5P29400 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms