Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
ABCD3P28288 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.39□□□□□ -1.55
ABCD3P28288 GNG5P2-201ENST00000372054 207 ntBASIC5.39□□□□□ -1.55
ABCD3P28288 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
ABCD3P28288 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
ABCD3P28288 RN7SKP29-201ENST00000410957 272 ntBASIC5.39□□□□□ -1.55
ABCD3P28288 SLC20A1P1-201ENST00000413906 956 ntBASIC5.39□□□□□ -1.55
ABCD3P28288 AC008173.1-201ENST00000418901 264 ntBASIC5.39□□□□□ -1.55
ABCD3P28288 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.39□□□□□ -1.55
ABCD3P28288 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC5.39□□□□□ -1.55
ABCD3P28288 HSFY7P-201ENST00000432672 318 ntBASIC5.39□□□□□ -1.55
ABCD3P28288 RPS3AP38-201ENST00000435889 763 ntBASIC5.39□□□□□ -1.55
ABCD3P28288 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
ABCD3P28288 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC5.39□□□□□ -1.55
ABCD3P28288 HSFY8P-201ENST00000437934 318 ntBASIC5.39□□□□□ -1.55
ABCD3P28288 AP006222.1-205ENST00000450734 457 ntBASIC5.39□□□□□ -1.55
ABCD3P28288 HSFY5P-201ENST00000453726 309 ntBASIC5.39□□□□□ -1.55
ABCD3P28288 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
ABCD3P28288 OSTCP1-201ENST00000455507 450 ntBASIC5.39□□□□□ -1.55
ABCD3P28288 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC5.39□□□□□ -1.55
ABCD3P28288 RPL7P48-201ENST00000461513 746 ntBASIC5.39□□□□□ -1.55
ABCD3P28288 AC011476.1-201ENST00000466725 307 ntBASIC5.39□□□□□ -1.55
ABCD3P28288 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.39□□□□□ -1.55
ABCD3P28288 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC5.39□□□□□ -1.55
ABCD3P28288 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
ABCD3P28288 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.39□□□□□ -1.55
ABCD3P28288 AC093890.1-201ENST00000502554 540 ntBASIC5.39□□□□□ -1.55
ABCD3P28288 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC5.39□□□□□ -1.55
ABCD3P28288 OR5H3P-201ENST00000502817 919 ntBASIC5.39□□□□□ -1.55
ABCD3P28288 C1GALT1P2-201ENST00000510813 1104 ntBASIC5.39□□□□□ -1.55
ABCD3P28288 AC108471.1-201ENST00000513977 287 ntBASIC5.39□□□□□ -1.55
ABCD3P28288 MAL2-205ENST00000521048 575 ntTSL 4 BASIC5.39□□□□□ -1.55
ABCD3P28288 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC5.39□□□□□ -1.55
ABCD3P28288 HMGN2P36-201ENST00000529541 409 ntBASIC5.39□□□□□ -1.55
ABCD3P28288 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC5.39□□□□□ -1.55
ABCD3P28288 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC5.39□□□□□ -1.55
ABCD3P28288 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.39□□□□□ -1.55
ABCD3P28288 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC5.39□□□□□ -1.55
ABCD3P28288 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.39□□□□□ -1.55
ABCD3P28288 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC5.39□□□□□ -1.55
ABCD3P28288 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.39□□□□□ -1.55
ABCD3P28288 AC133794.1-201ENST00000602731 914 ntBASIC5.39□□□□□ -1.55
ABCD3P28288 AC245100.7-201ENST00000609678 442 ntBASIC5.39□□□□□ -1.55
ABCD3P28288 AP005229.2-201ENST00000609980 697 ntBASIC5.39□□□□□ -1.55
ABCD3P28288 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
ABCD3P28288 MIR6861-201ENST00000618657 64 ntBASIC5.39□□□□□ -1.55
ABCD3P28288 AC011815.3-201ENST00000624194 473 ntBASIC5.39□□□□□ -1.55
ABCD3P28288 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.39□□□□□ -1.55
ABCD3P28288 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.39□□□□□ -1.55
ABCD3P28288 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC5.39□□□□□ -1.55
ABCD3P28288 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
ABCD3P28288 OR8G3P-202ENST00000641572 1255 ntBASIC5.39□□□□□ -1.55
ABCD3P28288 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
ABCD3P28288 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
ABCD3P28288 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
ABCD3P28288 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
ABCD3P28288 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
ABCD3P28288 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
ABCD3P28288 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
ABCD3P28288 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.38□□□□□ -1.55
ABCD3P28288 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
ABCD3P28288 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.38□□□□□ -1.55
ABCD3P28288 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
ABCD3P28288 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
ABCD3P28288 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.38□□□□□ -1.55
ABCD3P28288 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
ABCD3P28288 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
ABCD3P28288 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.38□□□□□ -1.55
ABCD3P28288 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
ABCD3P28288 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
ABCD3P28288 SNORD56.4-201ENST00000363883 71 ntBASIC5.38□□□□□ -1.55
ABCD3P28288 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
ABCD3P28288 MRPL53P1-201ENST00000414323 319 ntBASIC5.38□□□□□ -1.55
ABCD3P28288 AK4P4-201ENST00000419465 646 ntBASIC5.38□□□□□ -1.55
ABCD3P28288 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.38□□□□□ -1.55
ABCD3P28288 AC009506.2-201ENST00000420635 840 ntBASIC5.38□□□□□ -1.55
ABCD3P28288 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.38□□□□□ -1.55
ABCD3P28288 RPS3P2-201ENST00000421346 701 ntBASIC5.38□□□□□ -1.55
ABCD3P28288 MTCO3P21-201ENST00000430791 643 ntBASIC5.38□□□□□ -1.55
ABCD3P28288 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
ABCD3P28288 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC5.38□□□□□ -1.55
ABCD3P28288 MRPL50P1-201ENST00000431951 384 ntBASIC5.38□□□□□ -1.55
ABCD3P28288 AC096775.1-201ENST00000437724 448 ntBASIC5.38□□□□□ -1.55
ABCD3P28288 AL353093.1-201ENST00000441292 436 ntBASIC5.38□□□□□ -1.55
ABCD3P28288 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC5.38□□□□□ -1.55
ABCD3P28288 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.38□□□□□ -1.55
ABCD3P28288 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
ABCD3P28288 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.38□□□□□ -1.55
ABCD3P28288 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC5.38□□□□□ -1.55
ABCD3P28288 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC5.38□□□□□ -1.55
ABCD3P28288 RNU1-88P-201ENST00000459274 128 ntBASIC5.38□□□□□ -1.55
ABCD3P28288 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
ABCD3P28288 TPT1P3-201ENST00000492841 512 ntBASIC5.38□□□□□ -1.55
ABCD3P28288 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.38□□□□□ -1.55
ABCD3P28288 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.38□□□□□ -1.55
ABCD3P28288 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.38□□□□□ -1.55
ABCD3P28288 AC097486.1-201ENST00000515331 210 ntBASIC5.38□□□□□ -1.55
ABCD3P28288 AC112198.4-201ENST00000515450 351 ntBASIC5.38□□□□□ -1.55
ABCD3P28288 RNU5A-7P-201ENST00000515979 116 ntBASIC5.38□□□□□ -1.55
ABCD3P28288 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms