Protein–RNA interactions for Protein: P27658

COL8A1, Collagen alpha-1(VIII) chain, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1P27658 WDR61-205ENST00000558459 884 ntTSL 3 BASIC6.61□□□□□ -1.35
COL8A1P27658 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC6.61□□□□□ -1.35
COL8A1P27658 MIR5697-201ENST00000578045 78 ntBASIC6.61□□□□□ -1.35
COL8A1P27658 AC011840.5-201ENST00000582125 771 ntBASIC6.61□□□□□ -1.35
COL8A1P27658 MIR4271-201ENST00000582451 67 ntBASIC6.61□□□□□ -1.35
COL8A1P27658 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC6.61□□□□□ -1.35
COL8A1P27658 ACP5-208ENST00000590420 301 ntTSL 5 BASIC6.61□□□□□ -1.35
COL8A1P27658 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC6.61□□□□□ -1.35
COL8A1P27658 AC112191.3-201ENST00000604371 277 ntBASIC6.61□□□□□ -1.35
COL8A1P27658 AC080078.3-201ENST00000605407 463 ntBASIC6.61□□□□□ -1.35
COL8A1P27658 AC103710.3-201ENST00000608157 948 ntBASIC6.61□□□□□ -1.35
COL8A1P27658 AL031777.2-201ENST00000611953 196 ntBASIC6.61□□□□□ -1.35
COL8A1P27658 AC104237.2-201ENST00000612456 443 ntBASIC6.61□□□□□ -1.35
COL8A1P27658 MIR6823-201ENST00000622118 61 ntBASIC6.61□□□□□ -1.35
COL8A1P27658 AC091905.1-201ENST00000624400 311 ntBASIC6.61□□□□□ -1.35
COL8A1P27658 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC6.61□□□□□ -1.35
COL8A1P27658 LINC01002-204ENST00000631644 473 ntTSL 5 BASIC6.61□□□□□ -1.35
COL8A1P27658 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC6.61□□□□□ -1.35
COL8A1P27658 BCL2L11-224ENST00000639340 243 ntTSL 5 BASIC6.61□□□□□ -1.35
COL8A1P27658 ADA2-202ENST00000330232 3195 ntTSL 2 BASIC6.61□□□□□ -1.35
COL8A1P27658 ASAH1-203ENST00000381733 2512 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
COL8A1P27658 CDC42SE1-201ENST00000357235 3045 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
COL8A1P27658 PHYHIPL-202ENST00000373880 3578 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
COL8A1P27658 CDC27-201ENST00000066544 5801 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
COL8A1P27658 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC6.61□□□□□ -1.35
COL8A1P27658 CD46-205ENST00000358170 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
COL8A1P27658 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC6.61□□□□□ -1.35
COL8A1P27658 IQGAP1-201ENST00000268182 7233 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
COL8A1P27658 TAB3P1-202ENST00000452645 1634 ntBASIC6.61□□□□□ -1.35
COL8A1P27658 ATP5A1P10-201ENST00000622403 1603 ntBASIC6.61□□□□□ -1.35
COL8A1P27658 PTPRR-203ENST00000378778 2632 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
COL8A1P27658 ZNF814-201ENST00000435989 3146 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
COL8A1P27658 AP2B1-221ENST00000621914 5702 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
COL8A1P27658 MT-CO1-201ENST00000361624 1542 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
COL8A1P27658 MTCO1P12-201ENST00000414273 1543 ntBASIC6.6□□□□□ -1.35
COL8A1P27658 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
COL8A1P27658 MEF2C-232ENST00000629612 2851 ntTSL 5 BASIC6.6□□□□□ -1.35
COL8A1P27658 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
COL8A1P27658 CYP1D1P-201ENST00000416662 1433 ntBASIC6.6□□□□□ -1.35
COL8A1P27658 ZFHX3-207ENST00000641206 16414 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
COL8A1P27658 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC6.6□□□□□ -1.35
COL8A1P27658 LMLN-202ENST00000332636 1812 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
COL8A1P27658 CKAP2L-201ENST00000302450 4533 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
COL8A1P27658 NCKAP1L-201ENST00000293373 9016 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
COL8A1P27658 SH3D19-204ENST00000427414 2656 ntAPPRIS ALT1 TSL 1 (best) BASIC6.6□□□□□ -1.35
COL8A1P27658 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC6.6□□□□□ -1.35
COL8A1P27658 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
COL8A1P27658 GALK2-201ENST00000327171 5299 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
COL8A1P27658 C10orf25-201ENST00000625168 3078 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
COL8A1P27658 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
COL8A1P27658 RNU6-433P-201ENST00000363216 104 ntBASIC6.6□□□□□ -1.35
COL8A1P27658 Y_RNA.257-201ENST00000364596 102 ntBASIC6.6□□□□□ -1.35
COL8A1P27658 SNORA19-201ENST00000384737 128 ntBASIC6.6□□□□□ -1.35
COL8A1P27658 TRAV8-3-201ENST00000390435 341 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
COL8A1P27658 AL589994.1-201ENST00000404962 340 ntBASIC6.6□□□□□ -1.35
COL8A1P27658 OFD1P1Y-201ENST00000411756 1225 ntBASIC6.6□□□□□ -1.35
COL8A1P27658 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC6.6□□□□□ -1.35
COL8A1P27658 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC6.6□□□□□ -1.35
COL8A1P27658 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC6.6□□□□□ -1.35
COL8A1P27658 AC007365.1-201ENST00000439964 627 ntTSL 2 BASIC6.6□□□□□ -1.35
COL8A1P27658 AL031681.1-201ENST00000443304 400 ntBASIC6.6□□□□□ -1.35
COL8A1P27658 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC6.6□□□□□ -1.35
COL8A1P27658 EEF1B2P3-201ENST00000447718 678 ntBASIC6.6□□□□□ -1.35
COL8A1P27658 AC079448.1-201ENST00000449377 373 ntBASIC6.6□□□□□ -1.35
COL8A1P27658 AC144530.1-201ENST00000452862 555 ntBASIC6.6□□□□□ -1.35
COL8A1P27658 RN7SL372P-201ENST00000461982 298 ntBASIC6.6□□□□□ -1.35
COL8A1P27658 RN7SL868P-201ENST00000485915 303 ntBASIC6.6□□□□□ -1.35
COL8A1P27658 AC117395.1-201ENST00000487390 403 ntBASIC6.6□□□□□ -1.35
COL8A1P27658 AC009567.2-201ENST00000502989 349 ntBASIC6.6□□□□□ -1.35
COL8A1P27658 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC6.6□□□□□ -1.35
COL8A1P27658 MRPS35P2-201ENST00000508242 191 ntBASIC6.6□□□□□ -1.35
COL8A1P27658 AC083902.1-201ENST00000508578 359 ntTSL 5 BASIC6.6□□□□□ -1.35
COL8A1P27658 AC005741.1-201ENST00000511094 432 ntBASIC6.6□□□□□ -1.35
COL8A1P27658 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC6.6□□□□□ -1.35
COL8A1P27658 FTH1P9-201ENST00000513251 355 ntBASIC6.6□□□□□ -1.35
COL8A1P27658 LINC01094-206ENST00000514130 594 ntTSL 4 BASIC6.6□□□□□ -1.35
COL8A1P27658 CYP4F27P-201ENST00000514557 494 ntBASIC6.6□□□□□ -1.35
COL8A1P27658 MINOS1P4-201ENST00000515470 318 ntBASIC6.6□□□□□ -1.35
COL8A1P27658 LY96-202ENST00000518893 430 ntTSL 3 BASIC6.6□□□□□ -1.35
COL8A1P27658 ADAM2-205ENST00000521880 2125 ntAPPRIS ALT2 TSL 2 BASIC6.6□□□□□ -1.35
COL8A1P27658 AC079362.1-202ENST00000547089 278 ntTSL 3 BASIC6.6□□□□□ -1.35
COL8A1P27658 KRT73-AS1-203ENST00000552364 3808 ntTSL 2 BASIC6.6□□□□□ -1.35
COL8A1P27658 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC6.6□□□□□ -1.35
COL8A1P27658 AC068152.1-203ENST00000570314 254 ntTSL 3 BASIC6.6□□□□□ -1.35
COL8A1P27658 MIR3680-2-201ENST00000578247 87 ntBASIC6.6□□□□□ -1.35
COL8A1P27658 MIR3680-1-201ENST00000581433 87 ntBASIC6.6□□□□□ -1.35
COL8A1P27658 AC009977.1-201ENST00000586015 570 ntBASIC6.6□□□□□ -1.35
COL8A1P27658 MIR663AHG-213ENST00000596767 837 ntTSL 5 BASIC6.6□□□□□ -1.35
COL8A1P27658 AL390240.1-201ENST00000612950 384 ntBASIC6.6□□□□□ -1.35
COL8A1P27658 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC6.6□□□□□ -1.35
COL8A1P27658 CNTNAP3P1-201ENST00000616657 906 ntBASIC6.6□□□□□ -1.35
COL8A1P27658 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC6.6□□□□□ -1.35
COL8A1P27658 AC137590.2-201ENST00000619709 240 ntBASIC6.6□□□□□ -1.35
COL8A1P27658 AC093591.3-201ENST00000634516 308 ntBASIC6.6□□□□□ -1.35
COL8A1P27658 AC100810.6-201ENST00000638068 285 ntBASIC6.6□□□□□ -1.35
COL8A1P27658 CASC19-212ENST00000641153 1287 ntBASIC6.6□□□□□ -1.35
COL8A1P27658 PRKCA-202ENST00000413366 8751 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
COL8A1P27658 LPAR1-205ENST00000541779 2490 ntAPPRIS ALT1 TSL 1 (best) BASIC6.6□□□□□ -1.35
COL8A1P27658 CEACAM7-201ENST00000006724 2489 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
COL8A1P27658 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms