Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 OR2AF1P-201ENST00000454899 889 ntBASIC7.35□□□□□ -1.23
LIG1P18858 SNX18P26-201ENST00000458433 740 ntBASIC7.35□□□□□ -1.23
LIG1P18858 RN7SL83P-201ENST00000468131 297 ntBASIC7.35□□□□□ -1.23
LIG1P18858 AC105918.1-201ENST00000474399 838 ntBASIC7.35□□□□□ -1.23
LIG1P18858 LINC00888-204ENST00000487386 421 ntBASIC7.35□□□□□ -1.23
LIG1P18858 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC7.35□□□□□ -1.23
LIG1P18858 AC091965.3-201ENST00000506236 208 ntBASIC7.35□□□□□ -1.23
LIG1P18858 AC010424.1-201ENST00000506336 297 ntBASIC7.35□□□□□ -1.23
LIG1P18858 AC021146.8-201ENST00000507455 733 ntBASIC7.35□□□□□ -1.23
LIG1P18858 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC7.35□□□□□ -1.23
LIG1P18858 SCARNA5-201ENST00000516201 276 ntBASIC7.35□□□□□ -1.23
LIG1P18858 RNU2-30P-201ENST00000516209 141 ntBASIC7.35□□□□□ -1.23
LIG1P18858 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC7.35□□□□□ -1.23
LIG1P18858 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC7.35□□□□□ -1.23
LIG1P18858 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC7.35□□□□□ -1.23
LIG1P18858 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
LIG1P18858 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC7.35□□□□□ -1.23
LIG1P18858 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC7.35□□□□□ -1.23
LIG1P18858 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC7.35□□□□□ -1.23
LIG1P18858 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC7.35□□□□□ -1.23
LIG1P18858 PCNPP1-201ENST00000552501 511 ntBASIC7.35□□□□□ -1.23
LIG1P18858 AC005519.1-201ENST00000554490 601 ntBASIC7.35□□□□□ -1.23
LIG1P18858 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
LIG1P18858 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC7.35□□□□□ -1.23
LIG1P18858 AC006362.1-201ENST00000567392 174 ntBASIC7.35□□□□□ -1.23
LIG1P18858 NDUFA5P11-201ENST00000567995 343 ntBASIC7.35□□□□□ -1.23
LIG1P18858 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC7.35□□□□□ -1.23
LIG1P18858 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC7.35□□□□□ -1.23
LIG1P18858 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC7.35□□□□□ -1.23
LIG1P18858 AC091133.5-201ENST00000603088 301 ntBASIC7.35□□□□□ -1.23
LIG1P18858 AC012175.1-201ENST00000603755 531 ntBASIC7.35□□□□□ -1.23
LIG1P18858 AC009237.15-201ENST00000610252 501 ntBASIC7.35□□□□□ -1.23
LIG1P18858 AC099842.1-201ENST00000619919 596 ntBASIC7.35□□□□□ -1.23
LIG1P18858 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
LIG1P18858 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC7.35□□□□□ -1.23
LIG1P18858 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
LIG1P18858 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC7.35□□□□□ -1.23
LIG1P18858 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
LIG1P18858 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
LIG1P18858 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
LIG1P18858 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
LIG1P18858 CREM-203ENST00000344351 1625 ntTSL 2 BASIC7.34□□□□□ -1.23
LIG1P18858 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
LIG1P18858 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC7.34□□□□□ -1.23
LIG1P18858 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC7.34□□□□□ -1.23
LIG1P18858 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
LIG1P18858 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
LIG1P18858 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC7.34□□□□□ -1.23
LIG1P18858 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
LIG1P18858 AC083837.1-201ENST00000565297 2994 ntBASIC7.34□□□□□ -1.23
LIG1P18858 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
LIG1P18858 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
LIG1P18858 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
LIG1P18858 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
LIG1P18858 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
LIG1P18858 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
LIG1P18858 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
LIG1P18858 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC7.34□□□□□ -1.23
LIG1P18858 OR11H13P-201ENST00000359695 979 ntBASIC7.34□□□□□ -1.23
LIG1P18858 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC7.34□□□□□ -1.23
LIG1P18858 U3.52-201ENST00000384034 216 ntBASIC7.34□□□□□ -1.23
LIG1P18858 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
LIG1P18858 RNU6-932P-201ENST00000391108 106 ntBASIC7.34□□□□□ -1.23
LIG1P18858 RAB5CP1-201ENST00000395972 580 ntBASIC7.34□□□□□ -1.23
LIG1P18858 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
LIG1P18858 RNU6ATAC25P-201ENST00000408798 117 ntBASIC7.34□□□□□ -1.23
LIG1P18858 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
LIG1P18858 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC7.34□□□□□ -1.23
LIG1P18858 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC7.34□□□□□ -1.23
LIG1P18858 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC7.34□□□□□ -1.23
LIG1P18858 DPPA2P2-201ENST00000418220 897 ntBASIC7.34□□□□□ -1.23
LIG1P18858 RPS17P17-201ENST00000419392 409 ntBASIC7.34□□□□□ -1.23
LIG1P18858 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
LIG1P18858 HIGD1AP12-201ENST00000427832 281 ntBASIC7.34□□□□□ -1.23
LIG1P18858 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC7.34□□□□□ -1.23
LIG1P18858 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC7.34□□□□□ -1.23
LIG1P18858 AC092106.2-201ENST00000436597 487 ntBASIC7.34□□□□□ -1.23
LIG1P18858 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC7.34□□□□□ -1.23
LIG1P18858 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC7.34□□□□□ -1.23
LIG1P18858 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC7.34□□□□□ -1.23
LIG1P18858 CYCSP42-201ENST00000450823 238 ntBASIC7.34□□□□□ -1.23
LIG1P18858 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC7.34□□□□□ -1.23
LIG1P18858 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC7.34□□□□□ -1.23
LIG1P18858 MTCYBP1-201ENST00000454315 1119 ntBASIC7.34□□□□□ -1.23
LIG1P18858 AC103563.5-201ENST00000455643 364 ntBASIC7.34□□□□□ -1.23
LIG1P18858 AP003385.3-201ENST00000472498 287 ntBASIC7.34□□□□□ -1.23
LIG1P18858 CR383656.1-201ENST00000484916 377 ntBASIC7.34□□□□□ -1.23
LIG1P18858 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
LIG1P18858 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC7.34□□□□□ -1.23
LIG1P18858 RFPL4AP3-201ENST00000515267 345 ntBASIC7.34□□□□□ -1.23
LIG1P18858 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC7.34□□□□□ -1.23
LIG1P18858 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC7.34□□□□□ -1.23
LIG1P18858 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC7.34□□□□□ -1.23
LIG1P18858 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC7.34□□□□□ -1.23
LIG1P18858 OR5G4P-201ENST00000525251 760 ntBASIC7.34□□□□□ -1.23
LIG1P18858 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC7.34□□□□□ -1.23
LIG1P18858 DEFB130C-202ENST00000530001 230 ntBASIC7.34□□□□□ -1.23
LIG1P18858 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC7.34□□□□□ -1.23
LIG1P18858 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC7.34□□□□□ -1.23
LIG1P18858 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC7.34□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 118.5 ms