Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HMGA1P17096 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.3□□□□□ -1.56
HMGA1P17096 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HMGA1P17096 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HMGA1P17096 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
HMGA1P17096 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HMGA1P17096 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.3□□□□□ -1.56
HMGA1P17096 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.3□□□□□ -1.56
HMGA1P17096 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HMGA1P17096 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.3□□□□□ -1.56
HMGA1P17096 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
HMGA1P17096 MAPK10-338ENST00000641647 3362 ntBASIC5.3□□□□□ -1.56
HMGA1P17096 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC5.3□□□□□ -1.56
HMGA1P17096 SNORA2.3-201ENST00000383920 135 ntBASIC5.3□□□□□ -1.56
HMGA1P17096 RNA5SP241-201ENST00000391326 114 ntBASIC5.3□□□□□ -1.56
HMGA1P17096 RPA2P2-201ENST00000419698 796 ntBASIC5.3□□□□□ -1.56
HMGA1P17096 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.3□□□□□ -1.56
HMGA1P17096 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.3□□□□□ -1.56
HMGA1P17096 AC008072.1-201ENST00000434254 824 ntBASIC5.3□□□□□ -1.56
HMGA1P17096 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC5.3□□□□□ -1.56
HMGA1P17096 TCEA1P1-201ENST00000449716 880 ntBASIC5.3□□□□□ -1.56
HMGA1P17096 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.3□□□□□ -1.56
HMGA1P17096 AC002456.2-201ENST00000509356 380 ntBASIC5.3□□□□□ -1.56
HMGA1P17096 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.3□□□□□ -1.56
HMGA1P17096 EDDM3DP-201ENST00000554692 434 ntBASIC5.3□□□□□ -1.56
HMGA1P17096 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.3□□□□□ -1.56
HMGA1P17096 AC019322.1-201ENST00000571869 389 ntBASIC5.3□□□□□ -1.56
HMGA1P17096 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC5.3□□□□□ -1.56
HMGA1P17096 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.3□□□□□ -1.56
HMGA1P17096 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.3□□□□□ -1.56
HMGA1P17096 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HMGA1P17096 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HMGA1P17096 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HMGA1P17096 AC004158.1-201ENST00000564508 4319 ntBASIC5.3□□□□□ -1.56
HMGA1P17096 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HMGA1P17096 AC132825.1-201ENST00000463573 2247 ntBASIC5.29□□□□□ -1.56
HMGA1P17096 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.29□□□□□ -1.56
HMGA1P17096 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.29□□□□□ -1.56
HMGA1P17096 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
HMGA1P17096 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.29□□□□□ -1.56
HMGA1P17096 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HMGA1P17096 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HMGA1P17096 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HMGA1P17096 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.29□□□□□ -1.56
HMGA1P17096 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HMGA1P17096 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.29□□□□□ -1.56
HMGA1P17096 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
HMGA1P17096 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HMGA1P17096 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
HMGA1P17096 RNA5SP443-201ENST00000363083 132 ntBASIC5.29□□□□□ -1.56
HMGA1P17096 RNVU1-6-201ENST00000364688 164 ntBASIC5.29□□□□□ -1.56
HMGA1P17096 RNA5SP223-201ENST00000365174 120 ntBASIC5.29□□□□□ -1.56
HMGA1P17096 OR1L6-202ENST00000373684 1044 ntBASIC5.29□□□□□ -1.56
HMGA1P17096 SNORA77-201ENST00000408716 125 ntBASIC5.29□□□□□ -1.56
HMGA1P17096 USP9YP9-201ENST00000429406 715 ntBASIC5.29□□□□□ -1.56
HMGA1P17096 MTND2P40-201ENST00000436718 841 ntBASIC5.29□□□□□ -1.56
HMGA1P17096 PRPF38AP2-201ENST00000438179 851 ntBASIC5.29□□□□□ -1.56
HMGA1P17096 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC5.29□□□□□ -1.56
HMGA1P17096 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC5.29□□□□□ -1.56
HMGA1P17096 AL137845.2-201ENST00000444292 988 ntBASIC5.29□□□□□ -1.56
HMGA1P17096 AC112498.1-201ENST00000444401 332 ntBASIC5.29□□□□□ -1.56
HMGA1P17096 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC5.29□□□□□ -1.56
HMGA1P17096 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.29□□□□□ -1.56
HMGA1P17096 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.29□□□□□ -1.56
HMGA1P17096 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC5.29□□□□□ -1.56
HMGA1P17096 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.29□□□□□ -1.56
HMGA1P17096 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.29□□□□□ -1.56
HMGA1P17096 AL031320.1-201ENST00000604177 357 ntBASIC5.29□□□□□ -1.56
HMGA1P17096 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC5.29□□□□□ -1.56
HMGA1P17096 RNA5SP439-201ENST00000617595 124 ntBASIC5.29□□□□□ -1.56
HMGA1P17096 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
HMGA1P17096 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HMGA1P17096 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HMGA1P17096 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HMGA1P17096 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.29□□□□□ -1.56
HMGA1P17096 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HMGA1P17096 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HMGA1P17096 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HMGA1P17096 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.28□□□□□ -1.56
HMGA1P17096 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
HMGA1P17096 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.28□□□□□ -1.56
HMGA1P17096 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.28□□□□□ -1.56
HMGA1P17096 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HMGA1P17096 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.28□□□□□ -1.56
HMGA1P17096 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HMGA1P17096 Z97832.1-201ENST00000402490 328 ntBASIC5.28□□□□□ -1.56
HMGA1P17096 RN7SKP216-201ENST00000411050 312 ntBASIC5.28□□□□□ -1.56
HMGA1P17096 Y_RNA.625-201ENST00000411256 107 ntBASIC5.28□□□□□ -1.56
HMGA1P17096 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HMGA1P17096 AL354868.1-201ENST00000417077 482 ntBASIC5.28□□□□□ -1.56
HMGA1P17096 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC5.28□□□□□ -1.56
HMGA1P17096 NPM1P18-201ENST00000434232 732 ntBASIC5.28□□□□□ -1.56
HMGA1P17096 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.28□□□□□ -1.56
HMGA1P17096 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5.28□□□□□ -1.56
HMGA1P17096 RN7SL319P-201ENST00000480656 221 ntBASIC5.28□□□□□ -1.56
HMGA1P17096 AC007686.1-201ENST00000488511 463 ntBASIC5.28□□□□□ -1.56
HMGA1P17096 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.28□□□□□ -1.56
HMGA1P17096 OR7H2P-201ENST00000513483 306 ntBASIC5.28□□□□□ -1.56
HMGA1P17096 AL671862.1-201ENST00000515851 349 ntBASIC5.28□□□□□ -1.56
HMGA1P17096 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms