Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CXCL1P09341 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
CXCL1P09341 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
CXCL1P09341 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CXCL1P09341 AC005294.1-201ENST00000355509 281 ntBASIC3.98□□□□□ -1.77
CXCL1P09341 RNU1-150P-201ENST00000362491 162 ntBASIC3.98□□□□□ -1.77
CXCL1P09341 MIR195-201ENST00000385194 87 ntBASIC3.98□□□□□ -1.77
CXCL1P09341 GAPDHP42-201ENST00000406848 981 ntBASIC3.98□□□□□ -1.77
CXCL1P09341 LSM5-203ENST00000409782 649 ntTSL 5 BASIC3.98□□□□□ -1.77
CXCL1P09341 RNU2-18P-201ENST00000411224 162 ntBASIC3.98□□□□□ -1.77
CXCL1P09341 SEPT7P8-201ENST00000413308 775 ntBASIC3.98□□□□□ -1.77
CXCL1P09341 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC3.98□□□□□ -1.77
CXCL1P09341 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CXCL1P09341 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC3.98□□□□□ -1.77
CXCL1P09341 Z82198.3-201ENST00000421145 199 ntBASIC3.98□□□□□ -1.77
CXCL1P09341 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC3.98□□□□□ -1.77
CXCL1P09341 CKS1BP6-201ENST00000424932 240 ntBASIC3.98□□□□□ -1.77
CXCL1P09341 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC3.98□□□□□ -1.77
CXCL1P09341 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC3.98□□□□□ -1.77
CXCL1P09341 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC3.98□□□□□ -1.77
CXCL1P09341 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC3.98□□□□□ -1.77
CXCL1P09341 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC3.98□□□□□ -1.77
CXCL1P09341 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC3.98□□□□□ -1.77
CXCL1P09341 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC3.98□□□□□ -1.77
CXCL1P09341 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
CXCL1P09341 AC093166.2-201ENST00000455969 1017 ntBASIC3.98□□□□□ -1.77
CXCL1P09341 RN7SL515P-201ENST00000463999 297 ntBASIC3.98□□□□□ -1.77
CXCL1P09341 RN7SL568P-201ENST00000493069 298 ntBASIC3.98□□□□□ -1.77
CXCL1P09341 LSM3P4-201ENST00000502948 309 ntBASIC3.98□□□□□ -1.77
CXCL1P09341 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC3.98□□□□□ -1.77
CXCL1P09341 NACAP5-201ENST00000509863 636 ntBASIC3.98□□□□□ -1.77
CXCL1P09341 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC3.98□□□□□ -1.77
CXCL1P09341 RN7SKP238-201ENST00000516483 249 ntBASIC3.98□□□□□ -1.77
CXCL1P09341 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC3.98□□□□□ -1.77
CXCL1P09341 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC3.98□□□□□ -1.77
CXCL1P09341 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC3.98□□□□□ -1.77
CXCL1P09341 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC3.98□□□□□ -1.77
CXCL1P09341 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC3.98□□□□□ -1.77
CXCL1P09341 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC3.98□□□□□ -1.77
CXCL1P09341 ACYP1-204ENST00000555135 639 ntTSL 3 BASIC3.98□□□□□ -1.77
CXCL1P09341 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC3.98□□□□□ -1.77
CXCL1P09341 HMGN1P26-201ENST00000558737 303 ntBASIC3.98□□□□□ -1.77
CXCL1P09341 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC3.98□□□□□ -1.77
CXCL1P09341 AC007066.2-202ENST00000566531 914 ntBASIC3.98□□□□□ -1.77
CXCL1P09341 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC3.98□□□□□ -1.77
CXCL1P09341 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC3.98□□□□□ -1.77
CXCL1P09341 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC3.98□□□□□ -1.77
CXCL1P09341 AL133406.3-201ENST00000606817 541 ntBASIC3.98□□□□□ -1.77
CXCL1P09341 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC3.98□□□□□ -1.77
CXCL1P09341 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CXCL1P09341 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC3.98□□□□□ -1.77
CXCL1P09341 AC009237.17-201ENST00000618111 748 ntBASIC3.98□□□□□ -1.77
CXCL1P09341 AC005086.4-201ENST00000623065 213 ntBASIC3.98□□□□□ -1.77
CXCL1P09341 AC007603.3-201ENST00000636915 979 ntBASIC3.98□□□□□ -1.77
CXCL1P09341 5S_rRNA.29-201ENST00000641250 107 ntBASIC3.98□□□□□ -1.77
CXCL1P09341 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC3.98□□□□□ -1.77
CXCL1P09341 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CXCL1P09341 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CXCL1P09341 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CXCL1P09341 MTND4P26-201ENST00000415971 1359 ntBASIC3.98□□□□□ -1.77
CXCL1P09341 FTX-210ENST00000603037 8347 ntTSL 5 BASIC3.98□□□□□ -1.77
CXCL1P09341 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CXCL1P09341 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
CXCL1P09341 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CXCL1P09341 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
CXCL1P09341 KPNA2P2-201ENST00000419546 1489 ntBASIC3.98□□□□□ -1.77
CXCL1P09341 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC3.98□□□□□ -1.77
CXCL1P09341 IRF5P1-201ENST00000504852 2164 ntBASIC3.97□□□□□ -1.77
CXCL1P09341 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CXCL1P09341 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CXCL1P09341 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CXCL1P09341 AC006210.2-201ENST00000367074 1545 ntBASIC3.97□□□□□ -1.77
CXCL1P09341 MTCO1P15-201ENST00000529569 1526 ntBASIC3.97□□□□□ -1.77
CXCL1P09341 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC3.97□□□□□ -1.77
CXCL1P09341 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
CXCL1P09341 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
CXCL1P09341 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CXCL1P09341 RNA5SP131-201ENST00000365452 119 ntBASIC3.97□□□□□ -1.77
CXCL1P09341 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
CXCL1P09341 RNA5SP372-201ENST00000390836 115 ntBASIC3.97□□□□□ -1.77
CXCL1P09341 HDGFP1-201ENST00000405943 252 ntBASIC3.97□□□□□ -1.77
CXCL1P09341 AL512422.1-201ENST00000407033 553 ntBASIC3.97□□□□□ -1.77
CXCL1P09341 RNU2-22P-201ENST00000411266 212 ntBASIC3.97□□□□□ -1.77
CXCL1P09341 AL160275.2-201ENST00000412010 394 ntBASIC3.97□□□□□ -1.77
CXCL1P09341 RPL21P108-201ENST00000413857 481 ntBASIC3.97□□□□□ -1.77
CXCL1P09341 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC3.97□□□□□ -1.77
CXCL1P09341 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC3.97□□□□□ -1.77
CXCL1P09341 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC3.97□□□□□ -1.77
CXCL1P09341 ATP5LP2-201ENST00000440646 311 ntBASIC3.97□□□□□ -1.77
CXCL1P09341 AL672138.1-201ENST00000450604 1015 ntBASIC3.97□□□□□ -1.77
CXCL1P09341 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
CXCL1P09341 OARD1-211ENST00000480585 829 ntTSL 3 BASIC3.97□□□□□ -1.77
CXCL1P09341 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
CXCL1P09341 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC3.97□□□□□ -1.77
CXCL1P09341 AC074087.1-201ENST00000512059 724 ntBASIC3.97□□□□□ -1.77
CXCL1P09341 MTND6P2-201ENST00000512226 524 ntBASIC3.97□□□□□ -1.77
CXCL1P09341 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC3.97□□□□□ -1.77
CXCL1P09341 RNA5SP96-201ENST00000516041 107 ntBASIC3.97□□□□□ -1.77
CXCL1P09341 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC3.97□□□□□ -1.77
CXCL1P09341 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms