Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 OR51H2P-202ENST00000641424 3046 ntBASIC4.47□□□□□ -1.69
HLA-DQB1P01920 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HLA-DQB1P01920 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC4.47□□□□□ -1.69
HLA-DQB1P01920 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HLA-DQB1P01920 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
HLA-DQB1P01920 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.47□□□□□ -1.69
HLA-DQB1P01920 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC4.47□□□□□ -1.69
HLA-DQB1P01920 RNA5SP394-201ENST00000364216 119 ntBASIC4.47□□□□□ -1.69
HLA-DQB1P01920 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
HLA-DQB1P01920 AL512422.1-201ENST00000407033 553 ntBASIC4.47□□□□□ -1.69
HLA-DQB1P01920 AC245060.4-201ENST00000413293 1121 ntBASIC4.47□□□□□ -1.69
HLA-DQB1P01920 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC4.47□□□□□ -1.69
HLA-DQB1P01920 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC4.47□□□□□ -1.69
HLA-DQB1P01920 CLUHP1-201ENST00000435012 1190 ntBASIC4.47□□□□□ -1.69
HLA-DQB1P01920 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.47□□□□□ -1.69
HLA-DQB1P01920 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HLA-DQB1P01920 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC4.47□□□□□ -1.69
HLA-DQB1P01920 MRPL48P1-201ENST00000445390 636 ntBASIC4.47□□□□□ -1.69
HLA-DQB1P01920 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.47□□□□□ -1.69
HLA-DQB1P01920 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HLA-DQB1P01920 RN7SL189P-201ENST00000468631 289 ntBASIC4.47□□□□□ -1.69
HLA-DQB1P01920 RPL21P6-201ENST00000479171 504 ntBASIC4.47□□□□□ -1.69
HLA-DQB1P01920 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC4.47□□□□□ -1.69
HLA-DQB1P01920 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC4.47□□□□□ -1.69
HLA-DQB1P01920 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC4.47□□□□□ -1.69
HLA-DQB1P01920 AC025766.1-201ENST00000514061 409 ntTSL 5 BASIC4.47□□□□□ -1.69
HLA-DQB1P01920 AC006427.1-201ENST00000514359 712 ntBASIC4.47□□□□□ -1.69
HLA-DQB1P01920 AC060775.1-201ENST00000518241 520 ntBASIC4.47□□□□□ -1.69
HLA-DQB1P01920 AC021733.2-201ENST00000518830 497 ntBASIC4.47□□□□□ -1.69
HLA-DQB1P01920 AC005868.1-201ENST00000536421 331 ntBASIC4.47□□□□□ -1.69
HLA-DQB1P01920 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC4.47□□□□□ -1.69
HLA-DQB1P01920 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.47□□□□□ -1.69
HLA-DQB1P01920 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HLA-DQB1P01920 AC092121.1-201ENST00000569452 202 ntBASIC4.47□□□□□ -1.69
HLA-DQB1P01920 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC4.47□□□□□ -1.69
HLA-DQB1P01920 MYLK-221ENST00000583087 678 ntTSL 4 BASIC4.47□□□□□ -1.69
HLA-DQB1P01920 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC4.47□□□□□ -1.69
HLA-DQB1P01920 AC008814.1-201ENST00000603797 406 ntBASIC4.47□□□□□ -1.69
HLA-DQB1P01920 5S_rRNA.28-201ENST00000638107 119 ntBASIC4.47□□□□□ -1.69
HLA-DQB1P01920 AC073869.7-201ENST00000640874 297 ntBASIC4.47□□□□□ -1.69
HLA-DQB1P01920 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.47□□□□□ -1.69
HLA-DQB1P01920 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
HLA-DQB1P01920 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
HLA-DQB1P01920 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
HLA-DQB1P01920 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.47□□□□□ -1.69
HLA-DQB1P01920 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HLA-DQB1P01920 MAPK10-286ENST00000641208 8747 ntBASIC4.47□□□□□ -1.69
HLA-DQB1P01920 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.46□□□□□ -1.69
HLA-DQB1P01920 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC4.46□□□□□ -1.69
HLA-DQB1P01920 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
HLA-DQB1P01920 ICE2P1-201ENST00000512800 1849 ntBASIC4.46□□□□□ -1.69
HLA-DQB1P01920 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC4.46□□□□□ -1.69
HLA-DQB1P01920 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.69
HLA-DQB1P01920 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
HLA-DQB1P01920 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HLA-DQB1P01920 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
HLA-DQB1P01920 KARSP1-201ENST00000451871 1752 ntBASIC4.46□□□□□ -1.7
HLA-DQB1P01920 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HLA-DQB1P01920 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC4.46□□□□□ -1.7
HLA-DQB1P01920 RNU1-74P-201ENST00000384108 171 ntBASIC4.46□□□□□ -1.7
HLA-DQB1P01920 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
HLA-DQB1P01920 HMGB1P20-201ENST00000402555 677 ntBASIC4.46□□□□□ -1.7
HLA-DQB1P01920 AL592291.1-201ENST00000403830 352 ntBASIC4.46□□□□□ -1.7
HLA-DQB1P01920 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HLA-DQB1P01920 FABP7P1-201ENST00000424004 391 ntBASIC4.46□□□□□ -1.7
HLA-DQB1P01920 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC4.46□□□□□ -1.7
HLA-DQB1P01920 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.46□□□□□ -1.7
HLA-DQB1P01920 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC4.46□□□□□ -1.7
HLA-DQB1P01920 AL450996.1-201ENST00000445574 1202 ntBASIC4.46□□□□□ -1.7
HLA-DQB1P01920 AP006222.1-205ENST00000450734 457 ntBASIC4.46□□□□□ -1.7
HLA-DQB1P01920 LRRC37A14P-201ENST00000452297 462 ntBASIC4.46□□□□□ -1.7
HLA-DQB1P01920 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.46□□□□□ -1.7
HLA-DQB1P01920 RPL5P16-201ENST00000471467 790 ntBASIC4.46□□□□□ -1.7
HLA-DQB1P01920 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.46□□□□□ -1.7
HLA-DQB1P01920 RN7SL423P-201ENST00000486202 304 ntBASIC4.46□□□□□ -1.7
HLA-DQB1P01920 HMGB1P44-201ENST00000508597 572 ntBASIC4.46□□□□□ -1.7
HLA-DQB1P01920 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.46□□□□□ -1.7
HLA-DQB1P01920 RFPL4AP5-201ENST00000514977 504 ntBASIC4.46□□□□□ -1.7
HLA-DQB1P01920 SCARNA16.4-201ENST00000516956 187 ntBASIC4.46□□□□□ -1.7
HLA-DQB1P01920 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.46□□□□□ -1.7
HLA-DQB1P01920 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC4.46□□□□□ -1.7
HLA-DQB1P01920 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.46□□□□□ -1.7
HLA-DQB1P01920 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
HLA-DQB1P01920 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC4.46□□□□□ -1.7
HLA-DQB1P01920 MRPS21P7-201ENST00000566937 238 ntBASIC4.46□□□□□ -1.7
HLA-DQB1P01920 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC4.46□□□□□ -1.7
HLA-DQB1P01920 AC012616.1-201ENST00000600294 197 ntBASIC4.46□□□□□ -1.7
HLA-DQB1P01920 PPATP2-201ENST00000605635 508 ntBASIC4.46□□□□□ -1.7
HLA-DQB1P01920 AC016252.1-201ENST00000609721 474 ntBASIC4.46□□□□□ -1.7
HLA-DQB1P01920 AC079298.2-201ENST00000623885 459 ntBASIC4.46□□□□□ -1.7
HLA-DQB1P01920 TMEM30CP-203ENST00000637814 1035 ntBASIC4.46□□□□□ -1.7
HLA-DQB1P01920 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC4.46□□□□□ -1.7
HLA-DQB1P01920 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HLA-DQB1P01920 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HLA-DQB1P01920 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
HLA-DQB1P01920 CASC19-206ENST00000641028 1430 ntBASIC4.46□□□□□ -1.7
HLA-DQB1P01920 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
HLA-DQB1P01920 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DQB1P01920 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DQB1P01920 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 127 ms